Streptococcus viridans: NCTC3166_01732
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Entry
NCTC3166_01732 CDS
T08046
Symbol
recD
Name
(GenBank) helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
svf
Streptococcus viridans
Pathway
svf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC3166_01732 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svf03400
]
NCTC3166_01732 (recD)
Enzymes [BR:
svf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NCTC3166_01732 (recD)
DNA repair and recombination proteins [BR:
svf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC3166_01732 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
UvrD-helicase
HHH_5
DEAD
AAA_22
RsgA_GTPase
UvrD_C
nSTAND3
Herpes_Helicase
AAA_28
NPHP3_N
SLFN-g3_helicase
SAUGI
5_3_exonuc
HTH_IclR
AAA_25
ORF6C
T2SSE
ABC_tran
AAA
Ig_ZP2
Motif
Other DBs
NCBI-ProteinID:
VED67897
UniProt:
A0A3S4Q0T1
LinkDB
All DBs
Position
1:1709849..1712284
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AA seq
811 aa
AA seq
DB search
MEYYFSGTIERVIFENQSSFFRILLLDINDTDAEDYDDFEIIVTGTMADIVEGEDYTFWG
ELVHHPKYGQQLQMNRYERAKPTSKGLVKYFSSDHFKGIGLKTAQKIVDLYGEDTIDKIL
QAPEKLASISGLSKKNREAFVEKLQLNYGTERVLAQLANYGIPNKLAFQIQDFYKEETLQ
IVESAPYQLVEDIQGMGFKIADQLAEELGIASDAPERFRAGLVHSLLTLSLETGDTYVEA
KELLQATIQLLEASRPVELDPASVAQELASLIEEDKVQNIDTKIFNNSLFFAEEGIRSHI
GRLLEKGKQESFEPEKIEQTIDDIEEDLHIHYDPIQRKAIQEAIQQKVFVLTGGPGTGKT
TVINGIIGTYARLHHLDLRKKSQLPILLAAPTGRAARRMSELTGLPSATIHRHLGMTGDD
DTSHLDDYLDADFIIVDEFSMVDTWLANQLLSNISSNTKLLIVGDADQLPSVSPGQVLSD
LLQIPSIPQVKLEHIFRQGEDSTIVTLASQIRKGQLPSDFTEKKPDRSYFEAPSELIAPM
IEKITSAALRNGIPARDIQVLAPMYRGSAGIDQINGLMQELLNPLETDALFFQALDCQYR
NGDKVIHLVNDAESNVFNGDIGYITDLLPAKYTESKQDELTIQFDGNELVYPRNEWYKIR
LAYAMSIHKSQGSEFPVVILPLTNQSRRMLQRNLIYTAITRSKSKLILLGEYTAFHFATQ
NTGTARKTYLIERFSDVLPQGRESSSASTTHLKNTSQTTEPQKELVSVENHSDLSASQAS
QQGYRLTEDNYLSIDPLIGLTEEEIQHFFKN
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggaatactatttctcaggaaccattgagcgagtcatttttgaaaatcaaagtagtttt
ttccgtatcttattgttggatatcaatgataccgatgcagaggactatgatgactttgaa
attatcgttactggaacgatggcagatatcgttgaaggagaagattataccttctgggga
gaactggtccatcatccgaaatatggccaacagttgcaaatgaatcgctatgaacgagcc
aaacccaccagcaaaggcttggtgaaatacttctctagcgatcattttaaaggaattgga
ctcaaaacagcccaaaagatcgtggatctctatggtgaggataccattgataaaatcctt
caagcacctgaaaagctggcctctatctccggactttctaaaaagaatcgcgaggccttt
gtcgaaaaactccagctcaactatggtacagaacgggtcctcgcccaacttgccaactat
ggtatccctaataaactagccttccaaatccaagatttctacaaggaagaaaccttgcaa
atcgtcgaatcggctccctatcaattggtcgaagatattcaaggaatgggttttaagatt
gccgaccaactagcagaagaattagggattgccagcgatgcacctgaacgcttccgagcc
gggctagtccatagtctgttaactctctccttagaaacaggggacacctatgttgaagcc
aaagaattgctccaggccactatccaactcttggaagcatcccgtcccgttgagctcgat
ccagctagcgttgcccaagaattggccagtctcatcgaagaagacaaggtgcaaaacatt
gacactaagattttcaacaacagcctcttctttgcggaagaagggattagaagccatatc
ggtcgcctgctagaaaaaggaaagcaagaatctttcgaaccagaaaaaatcgaacaaaca
attgatgacattgaagaagatctccatatccactacgatcccatccaacggaaggctatc
caggaagccatccagcaaaaggtcttcgtgctaacaggtggaccaggaacggggaaaaca
actgttatcaatgggattatcggaacctacgctcgcctgcaccatttggaccttcggaag
aaatctcaattaccaatcctcttagctgctccaaccggtcgagcagcgcgaagaatgagt
gaactgactggtcttccgagcgccaccattcatcgtcacttaggaatgacgggagacgac
gacacgagtcacttggacgattatctcgatgcggattttatcattgtcgatgaattttct
atggtggatacttggttagccaatcagcttctcagcaatatctcctccaataccaaactc
ttaattgttggagatgccgatcagcttccttctgtgagtcctggacaagtcttgtccgat
ctcctacagatcccaagcatccctcaagtcaaactagaacacatcttccgtcaaggtgag
gattcgaccatcgtcactttggccagtcagattcgcaaaggccaactgccttctgatttt
acagagaaaaagcccgatcgttcctattttgaagcgccgagcgagctcatcgctcccatg
attgaaaaaatcaccagcgctgcccttcgcaacggcatcccggcccgggacatccaggtt
cttgctcctatgtatcgaggttctgctggcattgaccagattaatggtctcatgcaagaa
cttctcaatccattagaaacagatgctcttttctttcaagcgctagattgccagtatcga
aatggtgacaaggtcatccacctagtcaacgatgccgagagcaatgtctttaacggagat
attggctacattaccgaccttttaccggctaagtataccgaatccaaacaagatgaactc
accatccagtttgacggcaatgaattggtctacccacgcaatgaatggtacaagattcgc
ctggcctatgccatgagtatccataagtctcaagggagtgaattccccgtggtcatcctt
cccttgaccaatcagagtcgacggatgctccaacgcaatctgatctacacagccattacc
cgttccaagagcaaactcatccttctgggagaatacactgcatttcactttgcgacacag
aataccggaaccgcacgaaaaacctatctgattgaacgcttttcggatgtgcttcctcaa
ggtagagagtcttcctcagccagcaccactcatctgaaaaatacttctcaaacaacagag
ccccaaaaggagctcgtctcagttgaaaaccactctgacttatctgcttcccaagcttct
caacaaggctatcgattaacagaggacaattacttaagcattgatcccttgattggcctc
actgaggaagagattcaacacttcttcaaaaactag
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