Sturnus vulgaris (common starling): 106848993
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Entry
106848993 CDS
T08833
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg04140
Autophagy - animal
svg04148
Efferocytosis
svg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106848993 (VPS39)
04148 Efferocytosis
106848993 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106848993 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svg04131
]
106848993 (VPS39)
Membrane trafficking [BR:
svg04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
106848993 (VPS39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Lgl_C
SAM_CEP-1_C
EcoR124_C
Motif
Other DBs
NCBI-GeneID:
106848993
NCBI-ProteinID:
XP_014724758
LinkDB
All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
MHDAFEHVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIKKDAGCNRFEVTLEKSNK
NFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTISKAKGASLFTCDLQQSDTGE
EVLRMCVAVRKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVD
GKGSIKELFPTGKQLEPLVAPVADGKVAVGQDDLTVVLNEEGVCTQKCALNWTDIPIAME
HQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGTNIIYVASNHFVWRLIPVSI
ATQIQQLLQDKQFELALQLAEMKDDSDSEKRQQIHHIKNLFAFNLFCQKRFDESMQVFAK
LGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPGLSGAELEKAHLALIDYLTQKRSQLVKKL
NDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEE
SEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENL
HLVFSYSVWVLRDFPEDGLKIFTEDLPEVEALPRDKVLSFLIENFKSLTIPYLEHIIHVW
EETGADFHNCLIQLYCEKVQGLMKEYLSSFPADRAPVPAGEEGGDLGDYRKKLLLFLEKS
SWYEPSRLISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTNMAENYCHKHYDRNK
DGNKDVYLSLLRMYLSPPSVHCLGPIKMEVLEPQANLQAALQVLELHHSKLDTTKAINLL
PANTQISEIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKV
CTVCKKKIGNSAFARYPNAIVVHYFCSKEVNTLDT
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgccttcgagcatgtgccgatcctggagaagctgccgctgcagatcgactgc
ctggcggcctgggaggaatggctccttgttggtaccaaacaagggcatcttctgctttac
aggatcaagaaagatgcaggttgcaataggtttgaagtgacactagagaaatccaacaag
aacttctcaaagaagattcaacagatccatgttgtttctcagtttaaaattttggtcagt
ctattagaaaataacatttatgtccatgacctgttgacatttcaacaaattaccacaatt
tcaaaggcaaaaggtgcatctctcttcacttgtgatctccagcaatcagacacaggggaa
gaggtgctgaggatgtgtgtggcagtgcgtaagaagctgcagctttatttctggaaggac
agagagttccatgaactgcagggggatttcagtgtacctgatgtacccaagtctatggcc
tggtgtgaaaactccatctgtgtaggcttcaagagggactattacctgatacgggtggat
ggaaaaggatccatcaaagaactgtttcccacagggaagcagctggaaccactggtagct
cctgtagcagatggaaaagttgcagttggccaagatgatctaacagttgttcttaatgaa
gaaggagtctgtactcagaaatgtgccttgaattggacagatattcctatagccatggag
catcagcctccctacatcattgctgttctgccaaggtacgtggagatccgcacgttcgag
ccccggctgctggtgcagagcatcgagctgcagaggccacgcttcatcacctctggaggc
acaaacattatctatgtggcaagtaatcactttgtttggaggcttattccagtgtccata
gccacacagatccagcagcttctgcaagacaaacagtttgagctggctttgcagttagca
gaaatgaaagatgattcagatagtgagaagcgacaacaaattcaccacataaagaacctc
tttgccttcaacctcttctgccagaagcgttttgatgaatccatgcaagtttttgccaag
cttggtacagatcccactcatgtgatgggtctgtatcctgacctcctgcccacagattac
aggaaacagctacagtatcccaaccccctgccagggctttctggggcagagctggagaag
gcacatttagctctgatagactacctaactcaaaaaaggagtcagctagtgaagaagcta
aatgattctgatcatcagtccagtacctcacccctcatggaaggaacacccacgatcaaa
tccaaaaagaagctgctacaaatcattgatacgaccctgttaaagtgttacctgcataca
aatgtagcactggtggcaccactgctacgtctggagaacaatcactgccatattgaggag
agtgagcatgtactgaagaaggcacacaaatatagtgagctgataatactgtatgagaaa
aaaggtctgcatgagaaagcattacaggtactggtggatcagtcaaagaaagccaactca
cctttgaagggtcatgagaggacagtgcaatatctgcagcatttgggcacagagaacttg
cacttggtgttttcctactctgtctgggtgctaagagattttcctgaagatggactgaag
atatttacagaagacctccctgaagtggaagctttgccacgagacaaagtgctcagtttc
ttgatagaaaattttaaaagtttgactattccttacctggagcacatcattcacgtctgg
gaagaaactggtgcggactttcacaactgtctgatccagctgtactgtgagaaagtgcag
ggcttaatgaaagaatatctcagttctttccctgcagatagagctccagtgcctgctggg
gaggaaggaggagacttgggggattaccggaaaaagctgcttctttttctggagaagtct
agctggtatgaacctagtcgacttattagtgacttcccctttgatggtctcctagaagaa
cgtgctctgctcttgggtcgaatggggaagcatgagcaagctctgtttatttatgttcat
attttgaaggacaccaacatggctgaaaactactgccacaaacattacgacagaaacaaa
gatggcaacaaagatgtgtatctgtccctgctccgcatgtatctctccccacccagtgtt
cattgcctgggacccatcaagatggaggtgctggagcctcaagccaatctgcaggctgct
ctgcaggttttggaactgcaccacagcaaactggataccactaaggcaataaacctactc
ccagcaaatacacagattagtgagattcgcatcttcttagagaaagtacttgaagaaaat
gctcagaagaaaagatttaatcaagtgctcaagaatcttcttcatgcagaatttctgagg
gtccaggaggagcggatcttgcatcagcaagtcaagtgcattattacagaggaaaaggtg
tgcactgtttgtaaaaagaagataggtaacagtgcatttgctcgataccctaatgcaata
gtcgtgcattatttctgctccaaagaagtcaacacactggacacctga
DBGET
integrated database retrieval system
