Sturnus vulgaris (common starling): 106849620
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Entry
106849620 CDS
T08833
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
106849620 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svg04131
]
106849620 (VPS8)
Membrane trafficking [BR:
svg04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
106849620 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_VPS8_2
zf-RING_Vps41
WD40_CDC20-Fz
Clathrin
zf-RING_11
TPR_Vps41
zf_RING_Vps8_fungal
zf-RING_2
zf-RING_UBOX
WDR55
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
106849620
NCBI-ProteinID:
XP_014725818
LinkDB
All DBs
Position
Unknown
AA seq
1422 aa
AA seq
DB search
MAAAPEPAEAEPCPEPPVHRLSVAELDRELDSRSELIDDKEFDIPQVDTPPTLESILNET
DDEEESFILEDPFLLNIDNTDTHSYDTSSVASSDSGDRTHLKRLFVTERNVTWSGLNFFQ
YRVCRKTWKCSCPFGKKKLPDSLSLHGSVIRLSLLKGISAQIVSAADKVDAGLPTAIAAS
NLIAVGTSHGLALVFDQNQALRLCLGSTAVGAQYGAISALSINNDCSRLLCGFAKGQITM
WDLASGKLLRSITDAHPPGTAILHIKFTDDPTLAICNDSGGSVFELSFKRVMGVRTCESR
CLFSGSKGEVCCIEPLHAKVDLRDHPLTQYSLLAMASLTKILVIGLKPSLKVWMTFPYGR
MDPSSVPLLAWHFVAVQNSVNPMLAFCRGDVVYFLLVKRDDSGAIHVTKQRQLHLHYDLI
NFTWINSRTAVLLDSVEKLHVIDRQTQEELEISEVQLVYNSSHFKSLATGGNVSEALALV
GEKACYQSISSCGGQVFYLGTKSVHVMTLRSWRERVDHLLKQERLTDALALAWSFYEGKA
KAVVGLTGDTSKRKAVIADRMVEILLHYTDRTLKKCPDQGKIQVMEQHFQDVVPVIVDYC
LLLQRMDLLFNQIYDKMSENSVAKGIFLECLEPYILSDKLMGITAQVMKDLLLHFQDKNR
LENLEACIVHMDITSLDIQQVVLLCWENRLYDAMIYVYNSGMNDFISPMEKLFKVIAPPL
SAGKSLTDEQVVMGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEGS
VDEEVYPYVRTLLHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTP
SQVGCLFTFLARQLAKPNNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGI
VQFEESRLIQMAEKAEFYQICEFMYERQLRYDKIISCYLRDPLRKEEVFNYIHNILSMPG
YSAEEKQLVWQKALEHIEELLVLSPGKAAELAAIHFSEQIESIISKLQDQFLLFQFLRSL
LDPREGINQDLLHLPPCITEQFIELLCQYSPGQVLETLKVLEYCRLEETIQITQKHQLHE
ASSYLLEKKGDIHGAFLVMLERLQSKLLLLTQDDESSAEPSLLENIEDTLMKTIDLCQRN
SHSLDQQQREALWFPLLEAMMSPQKSSGSSQCPYSESLKSLTMQVLNNMAAFIALPSILQ
RILQDPVYGKGKLGEIQGLVLGMLDTFNYEQTLLETTTSLLNHDLHWSLCNLRASVTRGL
TPKQDYCCICLQQYKRRQETADEIIVFSCGHLYHSLCLLSKECGVVTKGHMRWMCYKCNS
SNKGGKLSENFSELKKGTAASLAQMSSESVLDPQQIQAFDQLCRLNRGTSRLALLTELAR
GGHGGGDKHGLLSVSHGDPATSSVFQNENFQLHLTPPPVAEE
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcccccgagccggcggaggccgagccgtgcccggagcctcccgtgcaccgg
ctgagcgtggcggagctcgaccgtgagctggactctcgcagcgagctgattgacgacaaa
gaatttgacattcctcaagttgatactcctccaacgctggagagcatcctgaatgagact
gatgatgaagaagagtctttcattttggaggatccctttctcttgaacattgataacacg
gatacacactcctatgacacctcttctgtggccagctctgacagtggggacaggacacac
ctgaaaagattgtttgtaactgagagaaatgttacctggagtggcttaaacttcttccag
tacagagtgtgcagaaaaacctggaagtgttcctgtccctttgggaagaaaaaactccca
gattctctctcactccatggatcagtgatacggctctcactcctgaaaggaatttctgct
caaatagtgtctgcagcagacaaagtagatgctggcttgcccactgcaattgcagcatca
aatctgatagcagtcgggacttcccatgggttagcactggtatttgatcagaaccaggct
ctccggctgtgtctgggcagcaccgcggttggggcccagtacggggccatctctgctctc
agcatcaacaatgactgttccaggctgctctgtggctttgcaaaaggacagatcaccatg
tgggatctggccagtgggaagctgctgcgatcaataacagatgcccaccctccaggaaca
gccattttgcacattaagtttacagatgatccgacacttgcaatttgcaatgacagtgga
ggctccgtgtttgaactgtcatttaagagggttatgggagtgaggacgtgcgagtctcgg
tgtctcttcagtggctccaagggggaagtttgctgtattgaaccattacatgcaaaggtt
gatttgagagaccatcctctcacccagtattcactgctggccatggcctccctcactaag
atcctggttattggcctgaagccatctctgaaagtgtggatgacctttccctatggccgt
atggacccttcgagtgtccccctgctggcgtggcacttcgtggctgtgcagaactcggtg
aaccccatgcttgccttctgtcgaggagatgtcgtgtactttctcctggtaaagagggat
gatagtggtgcaatacatgtcacaaagcagaggcagcttcatctgcactatgatctcatc
aactttacttggatcaactcccggacagcggtgctgctggacagtgtggagaagctgcat
gtcatagaccgtcagactcaggaggagctggagatctcagaagttcagctggtctacaac
agcagccacttcaagtctctggccacagggggcaatgtcagcgaggccttggcactggtt
ggagagaaagcttgttaccagtccattagcagctgtggtggtcaggtcttttaccttgga
actaagtctgttcatgtcatgacactgagaagctggagagagagagttgaccaccttctg
aaacaagaacgtctcacagatgccctggctcttgcttggtccttttatgaaggtaaagca
aaggcagttgtaggcttgactggggacacgagcaagaggaaagcagtcattgctgacaga
atggttgaaatccttctccattacactgatcggactctgaagaaatgtcctgaccaagga
aaaatccaggtgatggagcagcactttcaggatgtggtgcctgtcatcgtggattactgt
ctgctgctgcagcgcatggatctattatttaaccagatatatgacaagatgagtgagaac
tctgtagccaaaggcatctttctggagtgcttggagccatatatcttgagtgataagctt
atgggaatcacagctcaagtgatgaaagacttgctgcttcacttccaagacaagaacagg
ttggaaaacttggaagcctgcattgtgcatatggatatcaccagtttagacatacagcag
gtggttctcctgtgctgggaaaaccgcctgtacgatgccatgatctacgtctacaacagc
ggcatgaacgacttcatcagtcccatggagaagctgttcaaagtcattgctcctccactg
agtgctggaaagtctctcacagatgagcaggtggtgatgggcaacaagctgcttgtgtat
ataagctgctgcttggcaggccgtgcatatccgttgggtgatattcctgaagatctggta
cctttggtgaaaaatcaggtgtttgagtttctgatcaggctgcactcagctgagggctct
gtggatgaggaggtgtatccctatgttcggaccctgctgcacttcgacacgcgggaattc
ctcaatgtgctggctctgacttttgaagacttcaagaatgataagcaagccgtagaatat
caacagagaattgtggacattcttctgaaagtcatggtggagaattctgacttcacccca
tcacaggttggctgtctctttaccttccttgcccggcagcttgccaagccaaacaacacc
ttgtttgtcaacaggacactgtttgaccaggtgctggagttcctgtgcagcccggatgac
gactcccggcattccgagaggcagcaggtccttttagagctgctccaagcaggagggatc
gtgcagtttgaagagagccgccttatccaaatggcagagaaagctgagttctatcagatt
tgtgagttcatgtatgaacggcaacttcgctatgacaaaatcatcagctgttacctgcgg
gatcccctgaggaaggaagaagttttcaactacatccacaacatcctgtccatgcctggc
tacagtgctgaggagaagcagctggtgtggcagaaagctttggagcatatagaggagctg
ctggtgctgagcccaggtaaagcagctgagctggcagccattcacttcagtgagcagatc
gagagcatcatctcaaagctgcaggaccagttcttgctcttccagttcctgaggagtctc
cttgatccgagagaaggcattaaccaagacctgctgcacctcccaccctgtatcactgag
cagttcatcgagctgctctgtcagtacagcccaggccaggttttggagacactcaaagtt
ctggaatactgcagactggaggaaaccatccagataacccaaaaacatcagctccatgaa
gcttcttcatatttactagagaagaagggagatatccatggtgcctttttggttatgctt
gagcgattgcagagcaagttgctgctgcttactcaagatgatgaaagctcagctgaaccc
tccctgctagaaaatattgaagatactttaatgaagacaattgatctttgccagaggaat
tcacatagtttagaccagcaacagcgagaggccctctggtttcccctgcttgaggccatg
atgtccccacagaaatcctctggttcatcgcagtgtccctattctgaatctttgaagagt
ttgacaatgcaagtgctgaacaacatggctgcctttattgctcttccctcaatcctgcag
aggattctccaggatccagtttatggaaaagggaaacttggagaaattcaagggcttgtc
ctgggaatgctggacacttttaactatgaacaaacccttctagagacaaccacgagcctt
ttaaaccacgatctccactggtccctgtgtaacctgagagcctctgtcaccagaggcctt
accccaaagcaggattactgctgcatctgtctccagcagtacaaaaggaggcaagaaact
gctgatgaaatcattgttttcagctgtggccacttgtaccactcgctgtgcctgctgagt
aaggagtgcggggtggtcaccaagggccacatgaggtggatgtgctacaaatgcaactcg
agcaacaagggagggaagctgagtgagaacttctcagagctgaaaaaagggactgcagca
tctctggcacagatgagttcagagtctgtgttggatcctcagcaaatccaagcttttgac
cagctctgccgactcaaccgaggcacatcccgactggctctcctgacggagctggcacgc
gggggccatggcggcggtgacaagcatgggctgctcagtgtttcccacggggacccggcc
accagcagcgtcttccagaacgagaacttccagctgcacctgacgccccctccagtggct
gaagagtaa
DBGET
integrated database retrieval system
