KEGG   Sturnus vulgaris (common starling): 106849629
Entry
106849629         CDS       T08833                                 
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
  KO
K15542  polyadenylation factor subunit 2
Organism
svg  Sturnus vulgaris (common starling)
Pathway
svg03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:svg00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    106849629 (WDR33)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:svg03019]
    106849629 (WDR33)
Messenger RNA biogenesis [BR:svg03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     106849629 (WDR33)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 EIF3I Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_IFT122_1st eIF2A WD40_RFWD3 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_HPS5 Collagen Beta-prop_WDR11_2nd Beta-prop_WDR41 Ge1_WD40 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 106849629
NCBI-ProteinID: XP_014725833
LinkDB
Position
Unknown
AA seq 1323 aa
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYAPGDDLEPNSLAVIPGMGIPEQLKIAMEQEQMGKDESNDIEMTIPGLDWG
MEEVMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPLPPPPEPLNDRKEDIKLEEKKKS
QAEIEQEMAALQYTNPQLLEQLKIERLAQKQAEQVQPPPPGGSLHGPQPFPGQGPMSQMP
QGFQQPLPPQQMPMNMPQMGPPGPQGQFRPPGPQGQIGPQGPLHQGAGGPQGFMGPQGPP
GPQGPPQGMPRPQDLHGHQGMQRHPGPHGPMGPPGPQGNAGPQGHLGPQGLPGSQTHLGP
QGPPGPQGHLGPQGPPGGQGMQGPPGPRGMQGPLPHGMQGAPGSQGMQGPISQGPLMGLN
PRGMQGPPGPRDNQGPNPQGMMMGHPQEMRGPHMQSGLLGHGPQEMRGLQGPPPQGSMLG
PPQEMRGPPGGPQGQQGPPQGSLVGPQGNMQGPQGQPNPSRGPHPSQGPLPFQQQKTPLL
GDGPRPPFNQDGQNPGPPPLIPGLGQQGGQGRLGPHNQGPGLNKGDARGPPNHHLGPLSD
RRHEQNSGGPEHGPERGLFRGGQDWSEGRDSRGMPDRRGPHPDFHDDFDRPDDFRDDFHP
DKRFGHRLREFEGRGGPPLQDEKWRRGGPGPPFPPDHREFEGGGSNRGPPGAWEGRRPSD
DRYPRDPEDARFRGRRDESFRRGGPSRHEGRGPRGRDGFPGPEDFGPDDAFDSPDENSRG
RDHGARGRGRGAPRGARKGLLPTPDEFPRFEGGRKPESWDGNREPGPRPDHPPHDGHSPA
NRERSSSLQGMDMASLPPRKRPWHDGPGTSDHRDMDAPGGPPEERGKGRGNSGPSQRAPK
SGRSSSLDGDHHDGFHRDEGFGGGPGGVNNPSRGGRSGSNWGRGNNMNSGQSRRGGSRGG
RGR
NT seq 3972 nt   +upstreamnt  +downstreamnt
atggccacggagatcggttccccgccgcgcttcttccacatgccgcgcttccagcaccag
gcgccgcggcagctgttctacaagcggcctgacttcgcccagcagcaggccatgcagcag
ctcaccttcgacggcaagcgcatgaggaaagctgtcaacagaaagaccatagactacaat
ccttctgtcatcaaatatttggagaatagagtatggcagagagatcaacgagacatgcgg
gcgatccagcccgatgcaggatattataatgatttggtccctcctataggaatgctgaac
aaccctatgaatgctgtgacaacaaaatttgttcggacatctactaataaagtaaaatgc
ccagtgtttgttgtcaggtggactcctgaggggagacgcttggtcactggtgcatctagt
ggggagttcactttatggaatggactgactttcaattttgaaacgatattgcaggctcac
gacagccctgtaagggctatgacttggtcacacaatgatatgtggatgctgacagcagac
cacgggggatatgtgaaatactggcagtccaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgacgacggcactgttagaatctgggactttctacgttgccatgaggagagaattctt
cgaggccatggagcagatgtgaaatgtgttgactggcatcccacaaagggattagttgtt
tcaggaagtaaagatagccaacagcccatcaagttctgggatccaaagactggccagagc
cttgccacactacatgctcacaaaaacacagtgatggaggtgaaactgaatctcaatggc
aactggctgctgacagcttctcgtgaccatctctgtaaactcttcgacatccggaacctg
aaagaagaacttcaggtcttcaggggtcataagaaagaggccacagctgtggcctggcat
cctgttcacgaagggctgtttgccagtggagggtctgatggctccttgttgttctggcat
gttggggttgagaaggaggttggtggaatggaaatggcccatgaaggaatgatctggagt
ctagcttggcatcccctcggacacattctgtgttcaggctcaaatgatcacaccagcaag
ttttggactaggaatcggcctggagataaaatgcgagatcgttacaacttgaacctgctg
cctgggatgtcagaggatggtgtggaatatgctccaggagatgatctggagcccaacagc
ctggcagttattcctgggatgggaatacctgaacagttgaaaatagccatggagcaggag
cagatggggaaagatgagtccaatgacattgaaatgacaatcccaggactggattgggga
atggaggaagtaatgcaaaaggaccaaaagaaagtgccacagaaaaaagttccctatgca
aaaccaataccagcacagtttcagcaggcatggatgcaaaataaagttcctttgcctccc
ccacctgagccattgaatgatagaaaggaggatattaagttggaggagaaaaagaaatca
caggcagagattgagcaggaaatggcagcacttcagtacacaaacccacaactcctggag
caactgaaaattgagagacttgcacaaaagcaagctgagcaagtgcagccaccgccccca
ggaggatctctccatggacctcagcctttcccagggcaaggcccaatgtcacagatgcct
caagggtttcagcagccccttccacctcagcagatgccaatgaatatgcctcagatggga
cctcctggtccacaaggacagttccgacctccaggaccccaaggacaaataggacctcaa
ggtccattacaccaaggagctggaggtccacaagggttcatgggaccacaaggacctcca
ggcccccaagggcctccacaaggaatgccacggcctcaggatttacatggacatcaagga
atgcagagacatccgggccctcatgggccaatggggcccccaggtccacagggtaatgcc
ggcccccagggacacttgggaccgcagggcctgcctgggtctcagactcatttaggacca
cagggcccacctggcccacaaggtcacttgggtcctcagggtccccccggaggtcaagga
atgcaggggccacctggtccacgaggaatgcaaggacctcttcctcacggcatgcaagga
gctccgggatctcaagggatgcagggccccatatctcaagggcctctgatgggacttaat
ccaagagggatgcagggtccaccaggacccagagataaccagggacctaatccacaaggg
atgatgatgggtcatccacaagaaatgagaggtcctcatatgcaaagtggtttactagga
cacggtccccaagagatgcggggccttcagggaccccctcctcaaggctcaatgctggga
ccgccacaagaaatgcgtgggccacccggtgggccccagggccagcagggacctccacaa
gggtctttagtggggcctcaaggaaacatgcaaggacctcagggacagcccaacccttcg
agggggccacatccttcccagggccctctgcccttccagcagcagaaaacgcctctgttg
ggggacgggcctcgtccccccttcaatcaggatggacagaacccgggtcctcctcctctg
ataccaggcctggggcagcaaggaggacaaggtcgtctgggccctcacaaccaaggacct
ggtcttaataaaggtgacgcccgtgggccacccaaccatcacctgggcccgctgtcggac
cggcggcacgagcagaacagcggcggccccgagcacgggccagagaggggcctgttccga
ggggggcaggactggagcgagggcagggacagcaggggcatgcccgacaggaggggacct
caccccgatttccacgatgacttcgatcgccccgacgacttccgtgacgatttccacccg
gacaagagatttggccatcgactacgggagttcgaggggagaggaggcccaccattgcaa
gatgagaaatggagacgaggtggacctgggcctccctttcctcctgatcacagggaattt
gaaggaggtggttccaaccgtgggccccctggggcttgggaaggacggagaccttcagat
gacagatacccacgggatcctgaggatgcacgcttccgaggaaggcgagatgagagcttc
cggagaggaggaccctcgagacatgagggccggggacccaggggcagagatggctttcct
ggccctgaagattttgggccagatgatgcttttgactctccagatgaaaattccagagga
agggaccatggtgctcgggggcgaggtcgaggtgctccaagaggagctcggaagggtttg
cttcctactccagatgaattcccacgttttgaaggagggaggaaaccagaatcctgggat
ggaaacagagaaccaggtcctcgtccagaccaccctcctcatgatgggcattctccagcc
aacagagaacgttcctcctcactccagggcatggacatggcctcactgccaccacggaaa
cgtccctggcacgacggacccggaacctctgaccacagagacatggatgctccaggggga
cctccagaggagaggggcaaaggacgaggaaattcaggaccttcacagagagcaccaaaa
tctgggaggtccagttctctagatggagaccaccacgatggattccacagggatgaaggc
ttcggtggaggcccaggaggagtcaataacccttctcgaggaggaaggagtggcagcaat
tggggaagaggaaataacatgaactctggccagtcccggagaggaggatctcggggtgga
cgaggccgatag

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