Sturnus vulgaris (common starling): 106849980
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Entry
106849980 CDS
T08833
Symbol
DIS3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106849980 (DIS3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svg03019
]
106849980 (DIS3)
Messenger RNA biogenesis [BR:
svg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
106849980 (DIS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
Dis3l2_C_term
Toxin_R_bind_C
Motif
Other DBs
NCBI-GeneID:
106849980
NCBI-ProteinID:
XP_014726430
LinkDB
All DBs
Position
Unknown
AA seq
968 aa
AA seq
DB search
MLTSRTFVKRTRAGAVVKVVREHYLRDDIACGAAACRLCTPAAPAPGSGSGSAPGLEARP
SGAASSLCPGPHFLLPDTNLLLHQIDILEDPVIKNVIVLQTVLQEVRHRSAPVYKRIRDV
IQNPEKHFYSFTNEHHRETYIEQKRGETSNDRNDRAIRVAVKWYNEHLKKIEDEEKIQVI
FLTNDRTNKEKALEEGITAYTCEEYIKSLAANPELVDRLACVSDEGKEIEGGKIIFPEHI
PLSKLQQGIKSGIYLQGTYRANRENYLEATVWVHGDAEENKEIIVQGLKHLNRAIHEDVV
AVELLAKDEWVAPSSVVLQDDGQNEEDIENEEEKENTLKTSINKDMLRPTGRVVGIIKRN
WRPYCGMLSKSQIKEARRHLFTPADRRIPRIRIETRQADTLEGQRIIVAIDGWPRNSRYP
NGHFVKNLGSAGDRETETEVLLLEHDVPHQAFSQVVLSFLPKMPWSITEEDMKHREDLRH
LTVCSVDPPGCTDIDDALHCREIGNGNLEVGVHIADVSHFIRPGNALDEESAKRGTTVYL
CEKRIDMVPELLSSNLCSLRSNVDRLAFSCIWEMNHKAEILKTRFTKSIINSKASLTYAE
AQMRIDSATMNDDITVSLRELNKLAKILKKKRIDNGALTLASPEVRFHMDSETHDPIDLQ
TKELKETNSMVEEFMLLANISVAQKIYDEFPEFALLRKHPAPPPSNYDILVKAAKSKNLE
IKTDSAKALAESLDKAESPTFPYLNTLLRILTTRCMMQAVYFCSGMDNDFHHYGLASPIY
THFTSPIRRYADIIVHRLLAVAIGADSTYPELTDKHKLAEMCKNLNYRHKMAQYAQRASV
AFHTQLFFKTKGVVNEDAYILFVRKNAIVVLIPKYGLEGTVFFEEKDKPTPKLEYNSEVP
SLTVEDTTLHVFDKVKVNITLDDSNIQHQKMRMVLVEPKILGNDMPASLSAEASSKDEPE
KKKKKLQK
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgctgacctcgcggacgttcgtgaagcgcacgcgggcgggcgcggtcgtgaaggtggtg
cgcgagcattacctgcgcgacgacatcgcgtgcggcgccgccgcgtgccgcctctgcacc
cccgccgcgcccgcgcccggcagcggcagcgggagcgcgcccgggctggaggcgcggccc
agcggcgccgccagcagcctctgccccgggccgcacttcctgctgcccgacaccaacctg
ctcctgcaccagattgatatccttgaagatcctgttattaagaatgtcatcgtgctgcag
acagtcctacaagaagtcaggcatcggagtgcgccagtgtacaaacgtattagggacgtg
attcaaaacccagaaaaacatttctattctttcaccaatgagcatcacagagaaacgtac
atagagcagaagcggggagaaacttccaacgaccgcaatgacagagccattcgggtagca
gtgaaatggtacaatgaacacttgaagaaaatagaggatgaggaaaagattcaagttatc
tttttaacaaatgacagaactaataaagagaaagctctggaggaaggaataactgcttat
acatgtgaggagtatataaaaagcttggcagctaatcctgagcttgtagatcgtcttgct
tgtgtatctgatgaagggaaagaaatagaaggtggaaaaatcatattcccagaacatatt
cctcttagcaaattgcagcaaggaataaaatctggtatttacctccaaggaacttacaga
gcaaacagggagaattatcttgaagctacggtttgggttcatggagatgctgaggaaaac
aaagagataattgtacagggactgaaacatttaaaccgagcaattcacgaagatgttgta
gctgtggagctgttagcaaaagatgaatgggtggcaccatcctcagtggtcttgcaagat
gatggccagaatgaagaggacattgaaaatgaagaggagaaagaaaacactctgaagact
tccattaacaaggacatgctgaggcctacaggaagagtagtgggcattataaagcgaaac
tggcggccgtattgtgggatgctttccaagtcacagattaaagaggcaaggcgccatttg
tttacaccagctgatcgcagaattcctcgcattcgaatagaaaccagacaagcagataca
ttggaagggcaaagaataattgttgctattgacggttggcccaggaattccaggtatcct
aatggtcattttgtaaagaatttgggaagcgctggagacagagagacagagacagaagtt
cttctccttgaacatgatgtccctcaccaggctttttcccaggtggtccttagtttccta
ccaaaaatgccatggagcattacagaagaggatatgaaacacagagaggacttaaggcat
ctgaccgtttgtagtgttgatcctcctggttgcacagatattgatgatgcattacattgt
agagaaataggaaatggaaatctagaggtcggtgtacatattgcagatgtcagtcatttt
attcgcccaggaaatgctttggatgaggagtcagcaaaaagaggaacaacagtgtatctg
tgtgaaaaaaggattgatatggttccagagctacttagttccaacttatgctctctgaga
tctaatgtggacaggcttgcattttcatgcatatgggaaatgaaccataaagctgaaatt
ctaaaaactaggtttacaaagagtattatcaattccaaggcttctcttacatatgctgaa
gcacagatgagaatcgattcagcaactatgaatgatgatattactgtcagcctacgtgag
ctaaacaaattagcaaaaattctgaagaagaaaagaattgataatggagccttgacactt
gcatcaccagaagttcgtttccacatggacagtgaaactcatgatcctattgatctgcag
actaaggagctcaaagagacaaattccatggttgaagagttcatgttgcttgccaatatt
tctgtagcacaaaaaatttatgacgagttcccagagtttgccttgctccggaaacatccc
gctcctcccccatcaaattacgacatccttgtgaaggctgcaaagtccaagaatttggaa
attaagacagattcagcaaaggctttagctgaatcattagacaaagctgaatctcctaca
ttcccctacctaaatacactgctgcgaattttgaccactcgctgcatgatgcaagctgtt
tatttctgctcgggaatggataacgattttcatcactatggtttagcctcacctatttat
actcactttacctcacctattagaaggtatgctgatatcatagtccatcggcttttggca
gtggccataggagcagacagtacttacccagaactcacagataaacacaaactggcagag
atgtgtaaaaatctcaattaccgacataaaatggcacaatatgcacaaagagcctctgtg
gcattccatacacagctgttcttcaaaaccaagggagtagtaaatgaagatgcatatata
ttatttgtaagaaaaaatgcgattgtggttctgattcccaagtatggattagaaggaaca
gtcttctttgaagaaaaagacaaaccaacaccaaaactggaatacaacagtgaggtgcca
tcacttactgtggaagacacaacattacatgtatttgataaagttaaagtaaacattacg
ttagatgattccaacatccaacatcagaaaatgcggatggtcttggtagaacccaagata
ttaggaaatgatatgcctgcaagtctctctgcagaggcaagcagcaaggatgaaccagag
aaaaagaaaaagaagctacaaaaatag
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integrated database retrieval system
