Sturnus vulgaris (common starling): 106849989
Help
Entry
106849989 CDS
T08833
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
106849989 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svg04121
]
106849989 (LMO7)
Ubiquitin system [BR:
svg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
106849989 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
PDZ
PDZ_6
LIM
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
106849989
NCBI-ProteinID:
XP_014726453
LinkDB
All DBs
Position
Unknown
AA seq
1356 aa
AA seq
DB search
MDGREDAECDFQAAFAEARRWLEAVTGQSFGTKDFRAALENGVLLCDLINKIKPGIIKKI
NRLPTPIAGLDNINVFLKACENFGLKEAQLFHPGDLQDLSNRVTVKPEETNRRVKNVLIT
LYWLGRKAQSDPDYNGPYLNLKAFEKLLGQGLTKALEESSQPSRSGRDSGYGDIWYVDRG
EPFSSSATHKRDDSFDSLDSLGSRSCTSFSSDITLKGGSEGCDSDTDSELPSKMHDSHKD
DRSYRRISMIEPKPTTDFNRFLPNKNKQTSYVPAPLRKRRTEKNEDNRRSWASPVSTESD
GTFSRLFQKLSDEQGSKSLNDVSADELQTLRKIRYEELQKIKEQLQEQDLKWQEDLAKWK
NRRKSYTSELQKKKEEREEIERRASEVSGRSTKSLKEMQQEREERDQDSDEQQKQEHNWA
YSLNDDVFSEEKAPSTAAKDWSAGKDYRLEEDTSYSTKDSRRVYTTQAPKESLPESSAAR
EARALPESLAQEREQSPALLSTRYSVNAQTGSAQVSASLPRTYQKTDTSRLTSVVTPRPF
GVHSRGISSLPRSFTMDDSQKYNGEVEKTKRTQTLFTNTSFSQPDSAHSLSTDAFGNRGE
EGEEEKGVQSTPPPLKSQDQDAGSSIPRPEYGIPPDSLSLASSAEIASSTEPKDSKSMEQ
FSEMRISINQRPGHSRSFGFTANWSSSGAIVQTVEEGSPAALCQLQVDDEIIAVNGTKVS
HMDYSQWEEAISRALETGNLVMDVRRYGKNDWGKDLPSLPHVRHKILNLTSMATNIIGTS
ENKWIDATSGGKVSNASTISTKRDFSSSLQSSDTETKLINGMQGDLGSNEQRASEPISLK
NLKRRSQFFEQGGPEPAMPDLPVPSISAPSRRVWDQEEERKRQEKWQKEQDRLLQEKYQR
EQEKLREEWLRAKQEAEKESSKYFDEEQTVLTLNTTSVTSQAPPVSSWRASPEANAPEEP
ERDGENELAGSLLQEEEGRRRLREERRIQEEATRRFEQEQQERELQELELERERKEREQQ
QAEEQRRQAEMEEQRRQAERHREVSVEVPQYQRHYERYEVSKTIEERVGHPVIDRHYERY
EVSKTIEEQPAQSFGDRSKSKSTTELNEFNRIRNGTQSKYSERSWNMGESQKKSQKEQNL
SAAELERQQILQEMRKKTSLHTDSSWIRQRSASIHKEPVSLYSSSMRRGESLDNLDSSGI
RSWRHHSWLNQSASSSSLSSSQDFSRPVSTSNRAYMCTPSSSKAPPVATSARAPSTSQTA
PRAQSPLSASQSGSQTRSRSVSGKKICSYCNNILGKGAAMIIESLGLCYHLHCFKCVACG
CDLGGSRSGAEVRIRNNKLFCNDCYIRFKSGQPTSM
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atggacgggagagaggacgcggagtgcgacttccaggcggcgttcgccgaagcccggcga
tggctggaggcagttactgggcaaagctttggaaccaaagactttcgagcagctctagaa
aatggagtcctgttgtgcgatttgattaacaagatcaaacctggcatcattaagaagata
aatcgtctgccaactccaatagctggcttggataatataaatgtttttctgaaagcgtgt
gaaaactttggactgaaagaagctcagctttttcacccaggagatcttcaggatttgtcc
aatcgagttacagtcaaaccagaggaaaccaacagaagagtgaaaaatgttttgattaca
ttatattggcttgggagaaaagctcaaagtgacccagattataatggtccatacctcaat
cttaaagcatttgagaagttattagggcaaggattgactaaggcacttgaagagtccagc
cagccaagcaggagtggcagagatagtgggtacggcgatatctggtacgttgaccgggga
gagcccttttcgtcttcagctactcataaaagagacgattcctttgatagcttggactct
cttggttcaagatcctgcacaagcttttcatcagatataaccttgaaaggtggcagtgaa
ggttgcgacagtgacacagactcggaactgccttccaaaatgcatgactcccataaagac
gacaggtcttaccgtaggatttccatgattgaaccaaaacctaccactgacttcaatcgt
ttcttacccaacaaaaacaagcagacatcatatgtgccagcacctttaaggaagaggagg
acagagaagaatgaggacaacaggagaagctgggcaagtcctgtttccactgagtcagat
ggaacattttcaagactgtttcaaaagctttctgatgagcaagggagtaaatctttgaat
gatgtcagcgcagatgagctgcagacactgcgcaaaatccgatatgaagagctgcagaag
ataaaagaacagttacaagaacaagatctaaagtggcaagaagatctagcaaaatggaag
aatcgtagaaagagttacacttcagaattgcaaaagaaaaaggaagagagagaagaaatt
gaaaggagagcctctgaggtgtctggaaggagtaccaagtcactgaaagaaatgcagcag
gagagggaagagagagatcaggactctgatgagcagcagaagcaggagcacaactgggcg
tattcactgaatgatgatgtgttcagtgaagaaaaagcaccttccacagccgccaaagat
tggtcagcaggcaaagattaccgtttggaagaagacacttcctacagcactaaggacagc
agaagagtgtacaccacacaggcacccaaggagagcctgccggagagctcggctgcccgc
gaagctcgcgctctgccggagagcctggcgcaggaacgggagcagagcccggcccttctg
tccactcgctactcagtgaatgctcaaactgggtcagctcaggtttcagcttctctcccg
agaacttaccagaaaactgatacatccaggttaacatctgtggttacaccaagacctttt
ggtgtccactcaagaggaatctcgtcacttccacggtcgtttacgatggatgattctcag
aaatacaacggagaagtagaaaaaactaaaagaactcaaactttgttcaccaacacgtcc
ttttcacaaccagactctgcacactctctctccactgatgcatttggaaacagaggtgag
gagggagaggaggaaaaaggtgtccagtcaacacctcctcctttaaagtcccaagaccaa
gatgctggaagcagtattcctaggccagagtatggcatccctcctgattctctttcactt
gcatcttctgcagaaattgcgagttcaacagagcccaaggattcaaagtccatggaacag
ttcagtgaaatgagaatcagtataaaccagagacctggccacagtcgcagctttgggttt
acagcaaattggagttcttcaggagccattgtacagacagttgaagaaggcagccctgca
gcactttgtcagctgcaggtagatgatgagatcattgctgtcaacggcacaaaggtttca
catatggactatagtcagtgggaagaggccatcagcagagcactagaaactggaaacctg
gtcatggatgtcagacgatatggaaagaatgattggggcaaagacctgccttccctgcca
catgtaaggcataaaatcctcaatctcaccagtatggctaccaacattataggtacatct
gaaaataaatggattgatgcaacttcaggaggaaaagtttcaaatgcttccaccatatcc
acaaaaagagatttctccagcagccttcaaagttctgatacagaaaccaaattgataaat
ggaatgcaaggagatcttggctctaatgaacaaagagcatctgaacctatttctttgaaa
aacttaaaaagacggtcacaattttttgaacaaggaggcccagagcctgcaatgcctgat
ctcccagtcccatccatcagtgctcctagtcgtcgggtttgggatcaagaggaagagaga
aaacgacaggaaaaatggcaaaaagagcaggaccgtttgttgcaggagaaataccaacga
gaacaagagaaactgagggaagaatggctacgagctaaacaagaagcagaaaaagagagc
tccaagtattttgatgaggagcagaccgttctaaccctaaatacaacatccgtcacttct
caggctccacctgtgtccagctggagagcaagccctgaagcaaatgctcctgaggagcca
gaacgagatggagaaaatgagctggcagggagtttgctgcaggaggaagaaggaaggaga
aggcttcgggaggaacggaggatccaggaagaagcaaccaggcgttttgagcaagaacag
caagagcgggaactgcaagagctggagctggagagagaacgtaaagagagggagcagcag
caggctgaggagcagaggcggcaggcggagatggaggagcagaggcggcaggcggaaagg
cacagggaggtgtccgtggaggtgccacagtaccaaagacattacgaacgctatgaagta
tctaaaacaatagaggaacgagttggccatcctgtcattgacaggcattatgagcgttat
gaagtttctaaaaccattgaggagcaacctgctcagtcatttggtgacaggagtaagtcg
aagtcaactacagaactgaatgaattcaacagaatcagaaatggtacccagagcaagtat
tcggagaggtcctggaacatgggtgagtcacagaagaagtctcagaaggagcaaaacctg
tctgcagcagagttggagagacagcaaatccttcaggaaatgagaaagaaaacatctcta
cacacggacagcagctggattaggcagcgcagtgccagtatacataaggagcccgttagt
ctgtacagcagtagtatgaggagaggggagtctctggacaatcttgattcttcaggaata
aggtcatggaggcaccactcatggctgaaccagtctgcatcctcttcatctctgtcttct
agtcaagattttagtcgcccggtgtccacttccaaccgagcctacatgtgcactccttcc
tccagcaaagcacctcctgtggccacctctgccagagccccctccacgtcccagacagct
ccccgggctcagtctcctctctctgcttcccagtcagggtcccagacacgcagcaggtca
gtcagtgggaagaaaatctgttcatactgtaataacattctgggcaaaggagcagccatg
atcattgaatctcttggtctttgttatcatttacattgctttaagtgtgttgcctgtgga
tgcgaccttggtggatcccgctctggagctgaagtcaggatccgaaacaacaaactcttc
tgcaacgactgctatatcagatttaaaagtggacaaccaacctccatgtga
DBGET
integrated database retrieval system
