Sturnus vulgaris (common starling): 106850027
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Entry
106850027 CDS
T08833
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03030
DNA replication
svg03410
Base excision repair
svg03420
Nucleotide excision repair
svg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106850027 (RFC1)
03410 Base excision repair
106850027 (RFC1)
03420 Nucleotide excision repair
106850027 (RFC1)
03430 Mismatch repair
106850027 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svg03032
]
106850027 (RFC1)
03400 DNA repair and recombination proteins [BR:
svg03400
]
106850027 (RFC1)
DNA replication proteins [BR:
svg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
106850027 (RFC1)
DNA repair and recombination proteins [BR:
svg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
106850027 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_14
BRCT_2
Rad17
RNA_helicase
AAA_30
AAA_5
RuvB_N
AAA_7
AAA_17
AAA_16
AAA_33
AAA_18
nSTAND3
TIP49
AAA_19
NTPase_1
Motif
Other DBs
NCBI-GeneID:
106850027
NCBI-ProteinID:
XP_014726525
LinkDB
All DBs
Position
Unknown
AA seq
1128 aa
AA seq
DB search
MDIRKFFPPGKRQECETVKKSEKIKNGGGPSSGKKREKETKVNNSPSEDDSKQKWTKKKR
RIIYDSDSEEELQSVKKSKKSPEKKAATSKLGKVLKQDPVVYISETDEDDDFASERISLK
PKENGTSVVGCPGTNTVKKEVVKPQAKVKPLSPVKQTPTSALDFFGTRSVQRSEKKLVAS
KRKEPSQSRDSTLDDEAIARQLQLEEDSELERQLHEDEEFARTLAMLDETPQKKKARKDT
GEQTVLSINSSPNTTAGYKQSERVKATDSPNAAKNYSAKSQTKSEQLKGSRVSPQSSDGK
KEEIAEKERGAQNSLSREKAASGKEEKTTPKKEKVSPKKTESISPEDSEKKRNNYQAYRS
FLNREGPKALGSKEIPQGAENCLEGLTFVITGVLECIERDEAKSLIERYGGKVTGNVSKK
TNYLVMGRDCGQSKCEKASALGTKVIDEDGLFDLIRTMPGKKSKYELAAETEAKKVESKP
KKTPQKAEAGKRNFSPYKKEANNKKYKSTPEKGNTIRSVKKEATAVRKLTDFKRQTVEEK
EAPKPEGNLVSEVNEDGTERLLWVDKYKPVSLKAIIGQQGEQSCANKLLRWLRNWHKNTL
EDGQAKPSKAGSKDDGTGFKAALLSGPPGVGKTTTAALVCKELGYSYVELNASDTRSKNS
LKEVVAESLNNTSIKDFYSGASSSVSGKHVLIMDEVDGMAGNEDRGGIQELIALIRHTKI
PIICMCNDRNHPKMRSLVHYCLDLRFQRPRLEQIKGAMMSIAYKEGLKIPPPAMQEIILA
ANQDIRQVLHNLNMWCAKDKSLTYDEAKTDASRAKKDIKLGPFDVVRKVFATGEETARMS
LIDKSDLFFHDYSLAPLFVQENYVHVKPAAAGGNLKKHLVLLSRAADSICDGDIVDRQIR
SKQNWNLLPTQAIYASVLPGELMRGYMSQFPVFPSWLGKFSSTGKHDRIIQELAMHMSLR
TQTCKRTVNMEYLSYLRDALVQPLKDFGADGVQQAVTFMDSYCLMKEDVENIMEISTWGG
KPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLSSVKASKRQSGSAATLDLSEDLNVEEIQS
DEDEQDTLDSDAMIKQKKVKSSKLPKREKNEETTKKDGKRKEKTRHLE
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggatatccggaaattcttccctcctggaaagcgacaagaatgtgaaactgtgaaaaag
agtgaaaaaattaaaaatggtggagggccctcaagtgggaagaaaagggaaaaggagact
aaggtgaataattcacccagtgaagatgattccaaacaaaagtggacaaaaaagaagaga
agaataatctatgattcagattcagaagaggagttgcagtcagtgaaaaaatccaagaag
tcacctgagaaaaaagcagctacttccaaacttggtaaagttctaaagcaggatcctgtt
gtttatatttcagagacagatgaagatgatgattttgccagcgaaagaatttccctgaaa
ccaaaggagaacgggacgtcagtggttggttgtccaggaacaaatactgttaaaaaagaa
gtggtaaaaccacaagctaaagtcaaacccctctctccagtgaaacagactcccacctct
gcgcttgacttctttgggacaaggagcgtccaacgctcagaaaagaaactggtagcaagt
aaaaggaaagagccttcacagagcagagacagcacactagatgatgaggccattgctagg
caactgcagcttgaagaagattcagagctggagagacagctgcatgaagatgaagaattt
gctagaactctggccatgttggatgaaacaccacagaagaaaaaggctcggaaagataca
ggagagcaaacagtactgagcatcaacagcagccctaatacaactgcaggatataagcag
tcagaaagagtgaaagcaacagactcacctaatgcagccaagaattactctgcaaagtca
caaactaaatctgaacagttgaaaggttctcgtgtatccccacaatcatctgatggtaaa
aaagaagagattgctgaaaaggaaagaggtgctcaaaattcactgtcaagagaaaaagca
gcttcagggaaagaagagaagacaacaccaaagaaggagaaagtttctcccaagaagact
gagtctataagtcctgaggactctgaaaagaagcgaaacaattaccaagcttaccgaagc
ttccttaatcgtgagggtccaaaagcactgggttccaaagagatacctcagggagctgaa
aactgcttggaaggtctgacatttgtgattactggtgttctggagtgtattgagagagat
gaggccaagtctctgattgaacgttatggaggaaaagtaactggcaacgtcagcaagaag
acaaattacctggtgatggggcgagactgtggccagtccaaatgtgagaaggcatcagct
cttggtacaaaagttattgatgaggatggtctgtttgatcttattcgaactatgccaggc
aaaaagtccaaatatgagctggcagctgaaacagaggcaaagaaagtggagtcaaaaccc
aaaaagacaccacagaaagctgaagctggaaaaaggaattttagcccctacaaaaaggaa
gctaataataaaaaatacaagtctactcctgaaaaaggaaataccatcagatctgtcaag
aaagaagctacggctgttcgaaaacttacggactttaaacgtcagactgtagaggagaaa
gaagccccaaaacctgaggggaacttggtttctgaggttaatgaggatggcacagagaga
ttgctatgggtagataaatacaagcctgtatctcttaaggcaattattggacagcagggt
gagcaaagctgtgccaataaactgctccgatggctcagaaattggcacaagaacaccttg
gaagatggacaagcaaaacccagtaaagctggaagcaaagatgatgggacaggctttaaa
gcagcattactttctggtccacctggagttggtaaaactactacagctgctttggtttgt
aaggaactggggtacagctacgtagagctgaatgccagcgacactcgcagcaagaacagt
ctgaaggaagtagtggctgaatcacttaacaacaccagcatcaaagacttctattctggt
gcatcttcatcagttagcgggaaacatgttttgatcatggatgaagtggatggtatggca
ggcaatgaagacagaggagggattcaggagttgattgctttgatccgacacacgaagata
cccatcatttgtatgtgcaacgatcgcaaccatcctaaaatgcgctccttggtccactac
tgtttggatcttcgttttcagagacctcgtctagagcagatcaaaggtgccatgatgtct
attgcatacaaagaaggtttaaaaattcccccacctgctatgcaagagataatcctggca
gcaaatcaggacatcagacaggttttacataatcttaatatgtggtgtgcaaaagacaaa
tcactgacttatgatgaggctaaaacagatgccagcagagccaaaaaggacatcaaactg
ggccctttcgacgttgtccggaaggttttcgctactggagaggagactgctcgtatgtct
cttatagacaaatcagatcttttcttccatgattattcactagcacctctctttgtccaa
gagaactatgtgcacgtgaaaccagctgctgctggaggtaatttaaaaaagcacttggtg
ctcttgagtagagcagctgatagtatatgtgatggtgatatagtggacaggcagattcgt
agcaagcagaactggaatcttcttccaacacaggctatttatgcaagtgttctcccaggg
gagctgatgaggggttacatgtcccagtttcctgtctttcccagctggctggggaaattt
tcatccacaggcaaacatgatcgtatcattcaagaactggcaatgcacatgagtctcaga
actcagacatgcaagaggacagtaaatatggaatacttgtcgtatttgcgggatgcactt
gtccagcctttgaaagactttggagcagatggtgtgcaacaagctgtaacatttatggac
tcttactgcttgatgaaagaagatgttgaaaatataatggaaataagcacgtggggaggc
aaacccagtcctttttcaaagctggatcccaaggtcaaagcagcttttacacgtgcctac
aacaaagaggcacatctgactccctattcacttagttctgtcaaggcatctaaaaggcag
tcgggatctgcagcaaccttagatctgagtgaagacttgaatgtggaagagatccaatct
gatgaggatgagcaggacactcttgacagtgatgcaatgattaagcaaaaaaaggtgaag
tcttccaagctgccaaaaagagaaaaaaatgaagaaacaacaaaaaaagacggaaaaaga
aaagagaagacaagacatttagagtaa
DBGET
integrated database retrieval system
