Sturnus vulgaris (common starling): 106850092
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Entry
106850092 CDS
T08833
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
svg
Sturnus vulgaris (common starling)
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svg04121
]
106850092 (PDZRN4)
Enzymes [BR:
svg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106850092 (PDZRN4)
Ubiquitin system [BR:
svg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
106850092 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
zf-rbx1
PDZ_Tricorn
TRAF3_RING
Prok-RING_4
IBR_1
Motif
Other DBs
NCBI-GeneID:
106850092
NCBI-ProteinID:
XP_014726631
LinkDB
All DBs
Position
Unknown
AA seq
1032 aa
AA seq
DB search
MGFDPSRFAGPVAAELQCGLCGRVLEEPLSTPCGHVFCAGCLLPWAARRRRCPLRCRPLA
AAELRPVLPLRSLVQKLEVKCDYSPRGCGRTVRLRELPAHLAACRYGQPGPAEPQPRAGH
PSGLSPESSAGQPRAGGGHRCLRALRGGGAPEPGHELKREALRWSRREKSLLAQLSALQS
EVQLTARRYQAKFGQYMSHISSIARDLAGSQPGKGGERKPLMIMLHRENNTLGFNIIGGR
PRQNSQEESAEGIYVSKILENGPADKAEGLQIHDKIIEVNGKDLSKATHEEAVEAFRNAK
EPIVVQVLRRAPATKAHSSSQDVQLMDASTQTDITFEHIMALAKLRPSTPPVPDICPFLL
SDSCHSLHPVEHEFYEGNEYLSSLPADADRAEDFEYEEVELCRIGSQEKLGLTVCYRTDD
EEDMGIYVSEVDPNSIAARDGRIREGDRILQINGQDVQNREEAVALLSSEECRKIVLLVA
RPEMQLEEGWLDDERNEFLEELNLEMLEEQHNEAMQYTTNEVEQPKKHEEEDGTTDTATS
SSNNHEKDSGVGRTDESLRNDESSEQENATEEQNSATLQSKRDLGHSQDTLGSVELQCNK
SFVSGEYIESDFTGNPEEECERFRQLLELKCKIRNHGEYDLYYTSSMIECNRREQDGVEH
ELQLLNEELRNIELECQNIMQAHRLQKVRDQYGDIWALHDESFRNYNTSIDVQRGKLDDI
MEHPEKSDKDSSSAYNTAESCRSTPLTVERSPDNTLQRVISITNRKNLRTTIVANQSSSG
QSNRETTSAKTKPTEQNSAAENTVLASESSKFTDQERQGSEHIPYLSPYHSSSYRYGNIP
AHAKHYQSYMQLIQQKSAVEYAQSQLSLVSMCKDSQKCAEPKMEWKVKIRSDGTRYITKR
PVRDRILKERALKIKEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMM
RSRLECLKESPQSGSEGKKEINIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGT
RVHNAFLSVTTV
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgacccgtcgcggttcgcggggccggtggcggcggagctacagtgcgggctg
tgcgggcgggtgctggaggagccgctgtccactccgtgcgggcacgtcttctgcgccggc
tgcctgctgccctgggcggcgcggcgccgccgctgcccgttgcgctgccggccgctggcg
gccgccgagctgcgtcccgtcctgcccctccgcagcctcgtccagaagctggaggtcaag
tgcgactacagcccgcggggctgcggccgcaccgtgcggctgcgggagctgcccgcccac
ctcgcggcgtgccgctacgggcagcccggccccgccgagccgcagccccgggccgggcac
ccctccggcctctcgccggagagctcggcggggcagccgcgggcgggcggcgggcaccgc
tgtctgcgggcgctgcggggcggcggcgccccggagccgggtcacgagctgaagagggag
gccctgcgctggagcaggagggagaagtcgctgctggcgcagctgtcggcgctgcagagc
gaggtgcagctgacggcgcggcggtaccaggcgaagttcggccagtacatgagccacatc
agcagcatcgcccgggacctggcgggcagccagcccggcaagggaggagaacgcaagcca
ttaatgatcatgctacaccgagaaaataatactttgggattcaatattataggaggacga
cccagacagaacagtcaggaggaatctgctgagggaatttatgtgtcaaagattttggaa
aatggacctgcagacaaagcagaaggcttgcaaattcatgacaagattattgaggtcaat
gggaaggacctctccaaggccactcatgaagaagcagtggaagctttccgcaatgccaag
gaacccattgtagttcaggtcttacgacgagccccagctaccaaagctcacagcagctct
caggatgttcagcttatggatgccagcactcagactgacatcacctttgaacatattatg
gctctggccaagctaaggccgtccacaccaccagttcctgatatctgcccttttctactt
tcagatagctgccattctcttcatccagtggagcatgaattctatgaaggtaatgagtat
ctttccagcctgcctgctgatgcagatagagcagaggactttgagtatgaggaggtggag
ctgtgccgcattggcagccaggagaagctggggctgactgtctgttacagaaccgatgat
gaggaggacatgggaatctatgtcagtgaggttgatccaaacagcattgctgccagagac
ggacggatccgtgaaggagaccgcattttgcaaataaatggccaagatgtccagaacagg
gaagaggcagtggcattgctctccagcgaagaatgcaggaaaattgtgttgctggtggca
aggccagagatgcagctggaggaagggtggctggatgatgaaaggaatgaattcttagag
gagttaaacttggaaatgttggaagagcagcataatgaagcgatgcagtacacaaccaat
gaggtggagcagccaaagaaacatgaagaggaggatggcactacagacactgcaacctca
tcatctaataatcatgagaaggatagtggggtgggacggacagatgaaagtctcagaaat
gatgagagctcagagcaggaaaatgcaactgaggagcagaacagtgctaccctgcagagc
aagcgggatctgggccacagccaagatacactaggcagtgttgagctccagtgcaacaaa
agctttgtgtctggggaatacattgaatctgatttcacaggaaacccagaggaggaatgt
gaaaggtttcggcagctgttggaactgaagtgcaagattcgaaaccatggggagtatgat
ctttattacacaagcagcatgatagaatgcaacaggagagagcaagatggagtggagcat
gagctgcagctacttaatgaggaactgaggaacattgaactcgaatgccagaatattatg
caagctcaccggctccagaaggtgagagatcagtatggagacatttgggctttacatgat
gaaagtttcaggaattataacaccagcatagatgtacaaagaggcaaattggatgacatc
atggagcaccctgagaagtccgataaggacagctccagtgcctacaacactgctgaaagc
tgcaggagcactccgctgactgtggagcgatcccctgataacactctccagagagtgatc
agcataaccaacaggaaaaacctgaggaccacaattgttgccaatcagtcatcctcagga
caaagcaacagggagacaacctcagccaaaaccaaacccactgagcaaaacagtgctgct
gagaacacagtgctggcgtcagaaagcagcaaattcacggatcaggaaaggcaaggcagc
gagcacattccttatctatctccatatcacagttcttcttacaggtatgggaacatacct
gctcatgcaaaacattatcaaagctatatgcaactgatccagcagaagtctgctgtggag
tatgcccaaagccagctcagcctggtgagcatgtgcaaagactcgcagaagtgtgcagag
cccaagatggaatggaaagtgaaaataaggagtgatgggacgaggtacatcacaaagaga
ccagttcgagacagaatcctgaaggaacgtgccttaaaaattaaagaggagcgcagtggg
atgacgacagacgatgacacgatgagtgagatgaagatgggtcgctactggagcaaagaa
gagcggaagcagcatttggtgcgtgctaaagagcagaggaggcggcgggagttcatgatg
aggagcaggctggagtgtcttaaggaaagtccacagagtggcagcgagggcaaaaaggaa
atcaacattattgaactgagtcacaaaaagatgatgaaaaagagaaacaagaaaatcttg
gacaactggatgacaatacaagaactgatgacacatggtgctaaatccccagatggcaca
agagtgcacaatgcctttttatcagttactactgtatga
DBGET
integrated database retrieval system
