Sturnus vulgaris (common starling): 106850127
Help
Entry
106850127 CDS
T08833
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03440
Homologous recombination
svg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106850127 (TOP3A)
03460 Fanconi anemia pathway
106850127 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svg03032
]
106850127 (TOP3A)
03400 DNA repair and recombination proteins [BR:
svg03400
]
106850127 (TOP3A)
Enzymes [BR:
svg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
106850127 (TOP3A)
DNA replication proteins [BR:
svg03032
]
Eukaryotic type
DNA Topoisomerases
106850127 (TOP3A)
DNA repair and recombination proteins [BR:
svg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
106850127 (TOP3A)
FA (Fanconi anemia) pathway
106850127 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Zn_ribbon_recom
zf-CCHC_2
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
106850127
NCBI-ProteinID:
XP_014726701
LinkDB
All DBs
Position
Unknown
AA seq
1008 aa
AA seq
DB search
MNLYLRLFTRGTMLPQPWRFFSRAAEDLALHRIRKVLCVAEKNDAARGIAELLSNSRMRR
REGFSKFNKIYEYDYQMFGQKVTMVMTSVSGHLLAHDFIMPFRKWHSCNPLALFDAEIEK
YCPENYLDIKRTLEREIQQCQALVIWTDCDREGENIGFEIIHVCKAVKPNLQVFRARFSE
ITLHAVRSACENLTQPDQKTSDAVDVRQELDLRIGAAFTRFQTLRLQKIFPDILADQLIS
YGSCQFPTLGFVVERFKAIQAFVPEAFYKIKVTHEHEDGSVVFSWKRNRLFNHTACLVLY
QMCMEDPVATVVDVVSKPKSKWRPLPLDTVELEKLASRKLKINAKETMTIAEKLYTKGFI
SYPRTETNIFPKELNLSALVEQQTQDPNWGDFAQRILDQGGPTPRSGTKSDQAHPPIHPT
KYTSNLQGNEQRLYEFIVRHFLACCSQDAKGQETTVEIDIANEQFIAQGLMILARNYLEV
YPYDKWSDKVIPLYQKGSRFQPTTVEMVDGETSPPMLLTEADLIALMEKHGIGTDATHAE
HIETIKTRMYVGLTADQRFLPGQLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKK
DKSVVLQQQVQKYKQVFIEAVARANKLDQALAQYLGEAAEVPEQDEVYPETPVSVRKCPQ
CNSDMVLKTRKNGGFYLSCMGYPACKTAVWFPDFVLDVTRDESICDVCQPHPVHRLKFKF
KKGSVPPVMPLEFVGCIGGCDEMLKELLDLKYLHRSSQPASSTTQPGHPMQANHSLNRAS
NQTRQARGTSNLAQGHLLSINSSRTPRAAPPAAPDDGNAVVCNCGSEALLLTVRKEGPNK
GRQFYKCSSSTCNFFLWADEQPQDRGSVAPRSSTLLQPTAGRAPGVGREPLGSSSSDAEG
GPMCRCEQPAVTRTVQKDGPNKGRQFHTCPKPREQQCGFFQWADENVAPGPSGDDSLNHF
GSNGYSRGLGSKAKRPSNLSSGSAAKKPRTCSICHQPGHTRKTCPQNH
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctacttgcggctctttaccaggggcacgatgctgccccagccctggcgcttc
ttctcgcgggctgcggaggatttggcgctgcacaggatccgcaaggtcctgtgcgtggcg
gagaagaacgatgctgcccgagggatcgctgagctgctctccaacagcaggatgaggcgg
cgagaagggttttccaagttcaacaagatctatgaatacgactaccagatgtttggccag
aaagttaccatggtgatgacatctgtgtcaggacatttactggctcatgattttatcatg
ccatttcgcaaatggcatagctgcaaccctttagctctttttgatgctgaaattgagaag
tattgccctgaaaattacctggatatcaagagaacccttgaacgagaaatccagcagtgc
caagccctggtgatctggactgactgtgatcgagagggagagaacattggctttgagatc
atccacgtgtgcaaagctgtaaagccaaacctccaggttttccgagcccggttctctgag
atcacacttcatgctgtcagatcagcctgtgagaacctcacccagcccgaccaaaaaacc
agcgatgccgtcgacgtcaggcaggagctggacctcaggataggtgctgccttcaccaga
ttccagactctgaggctgcagaagatcttccctgatattttagcagatcagctgatcagc
tatggcagctgccagttcccaacactgggatttgtagttgaacgctttaaagccatccag
gcctttgttcctgaagccttctacaaaattaaagtgacccacgagcatgaagatggcagc
gtggtcttcagctggaagaggaaccggctcttcaatcacacagcgtgcctggtcctttac
cagatgtgtatggaggatccggtagcgactgttgttgatgttgtgagcaagccaaagagc
aaatggaggcccctgcccttggacactgtggaactggaaaaattggcttcccgcaaactg
aaaataaatgcaaaggaaacgatgacaatagcagaaaaactctatactaaagggttcatt
agttaccctcgaaccgagaccaacatcttccccaaggagctcaacctctctgccttggta
gaacagcaaacacaggaccccaactggggagactttgcacagaggattttggatcagggt
gggccaacccctcggagtggaaccaaatctgatcaggctcaccctcctattcaccccaca
aaatacaccagcaacctgcagggcaatgagcagagactctacgaattcatcgtgcgccac
tttttggcttgctgctctcaagatgccaaaggacaggaaacaactgtggagatcgacatt
gccaacgagcaattcattgctcaaggactcatgatcctggcccgaaattacctggaagtg
tatccttatgacaagtggagtgataaggttatcccactgtatcagaaggggtctcgcttt
cagcccaccacggtggagatggtggatggggaaaccagtcctcccatgctcctcacagaa
gcagatctcattgctctcatggaaaaacatggcattgggactgatgccacccacgccgag
cacatcgagacgatcaagacgcggatgtacgtggggctcacggcagatcagcgcttcctg
cccggccagctgggcatggggctggtggaaggctatgattccatgggctacgagatgtcc
aagcctgaccttcgagctgagctggaggctgatctaaaactgatctgtgaggggaagaaa
gacaaatctgtagtgttgcagcagcaggtccaaaagtacaagcaagtcttcattgaagct
gtggccagagccaacaagctggaccaggccctggctcagtaccttggagaagctgcagaa
gttccagagcaggatgaggtgtacccagaaacgcccgtttctgttcggaaatgtccccag
tgcaacagtgacatggtcctgaagaccaggaagaatggcgggttctacctcagctgcatg
ggctatccagcctgtaaaactgcagtctggttccctgatttcgtgctggatgtgaccagg
gacgagagcatctgtgatgtgtgtcaaccccatccagttcacagactgaagtttaaattc
aagaaaggcagcgttccccctgtgatgcccctggagttcgttggctgcattggaggctgt
gatgagatgctgaaagagcttttggacctcaagtacttgcacagatcatcccaacctgca
tcatccaccacccagccggggcatcccatgcaggccaaccactcactgaacagagccagc
aatcagaccaggcaagccagggggacctccaacctggcacagggacacctgctgtccatc
aactcctccagaacccccagggctgctcctccagctgctccagacgatgggaatgccgtg
gtgtgcaactgtgggagcgaggcgctgctgctgaccgtgcgcaaggaggggcccaacaag
ggccgccagttctacaagtgcagctccagcacctgcaacttcttcctctgggctgacgag
cagccacaggacagaggcagcgtggctccacgcagctccacactgctccagcccactgct
gggagagccccaggagttgggagagagcccctggggagcagcagctcggatgctgaaggt
ggcccaatgtgcaggtgtgagcagcctgccgtgacacgcaccgtgcagaaggacgggccc
aacaagggcaggcagttccacacctgccccaagccccgggagcagcagtgtggcttcttc
cagtgggcagatgagaacgtggcaccaggcccttctggagatgactctttgaaccacttt
ggcagcaatggatactccagagggttaggaagcaaggccaagagacccagcaatctctcc
tcaggatctgctgccaagaaaccacggacctgcagcatttgccaccagcctgggcacaca
aggaaaacctgccctcagaaccactga
DBGET
integrated database retrieval system
