Sturnus vulgaris (common starling): 106850173
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Entry
106850173 CDS
T08833
Symbol
NPC1
Name
(RefSeq) Niemann-Pick C1 protein
KO
K12385
Niemann-Pick C1 protein
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03265
Virion - Ebolavirus and Lyssavirus
svg04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus and Lyssavirus
106850173 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
106850173 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svg02000
]
106850173 (NPC1)
Transporters [BR:
svg02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
106850173 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
NPC1_N
Sterol-sensing
MMPL
Motif
Other DBs
NCBI-GeneID:
106850173
NCBI-ProteinID:
XP_014726791
LinkDB
All DBs
Position
Unknown
AA seq
1285 aa
AA seq
DB search
MGTPQGSPGRGGLGFLVLLLLLSPVRVLPQKCVWYGECGIASGDKRYNCAYDGLPIALPE
DGYDLMQELCPGLFFGNVSTCCDVQQLQTLKNNLQLPLQFLSRCPSCFYNLINLFCELTC
SPNQSDFLNVTSTIPYYDPVLKENKSSITELQYFIGDRFANAMYNACKDVEAPSSNVKAL
GLLCGKDVKDCNATNWIEYMFSKDNGQTPFSIIPIFSDVPVHGMNPMNNATKGCNESVDD
STGPCSCQDCSIVCGPKPQPPPLPSPWLLFGLDAVYVIMWISYMGFLLIFFALVFGVWCY
RRRHFVSEYTPIDSNVAFSVNSHRDNGNITCGERLGERFENGLRMTFTSWGAFCVRNPRP
VILFSVVFIAMCCSGFVYIKATTNPVDLWSAPSSQARKEKEYFDTHFGPFFRTEQIIIQA
PKSHPDTYSPYPSGEDVPFGPPLTKDILHQVLDLQDAIVSITASYDNETVMLKDICLAPL
APYNNNCTILSVLNYFQNSHSVLDHTVGDEFFVYADYHTHFLYCVRAPASLNDTSLLHDP
CLGTFGGPVFPWLVLGGYDDDNYNNATALVITFPVNNYYNDSKKLMKALAWEKEFINFLK
NYNNSNLTISFSAERSIEDEINRESNSDISVVLISYMVMFVYISIALGHIQSCRRLLVDS
KISLGIAGILIVLSSVACSIGIFSYFGIPLTLIVIEVIPFLVLAIGVDNIFIMVQTLQRD
ERIQGETLDKQIGRVLGDVAPSMFLSSFSETVAFFLGTLSTMPAVRTFSLFAGMAVLIDF
ILQVTCFVSLLGLDIKRQESNRLDILCCIKSSEEMSGVQRSESMLFLFFKNLFSPYLLKD
WMRPIVIAVFVGILSFSAAVMHNVEIGLDQSLSMPDDSYVIDYFSHISKYLHVGPPVYFV
LEEGHNYTSLEGQNMVCGGMGCNNDSLVQQIFNAAEIGSYTRIGYAPSSWIDDYFDWVKP
QSSCCRVYNTTGQFCNASVSDPSCTRCRPLTPEGKQRPQGEDFMTFLPMFLSDNPNPKCG
KGGHAAYYSAVNFINNKTEVGATYFMTYHTVLKTSSDFIDAMRKARIIADNITETMGIKE
KNYRVFPYSVFYVFYEQYLTIVHDAIFNLCISLGSIFLVTTVLLGFEVWAAVVVSITIAM
IIVNMFGVMWLWGISLNAVSLVNLVMSCGIAVEFCSHVTRAFTISTKGSRVERAEEALSH
MGSSVFSGITLTKFGGIVVLAFSKSQIFKIFYFRMYLAMVVLGATHGLIFLPVLLSYIGP
SVNKAKTRAAQERTRGTERERLLYF
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggggacccctcaaggcagccccgggcgaggcggtctaggcttcctcgtcctcctcctg
cttctgtcgcccgtgcgggtacttccacaaaagtgtgtgtggtatggagaatgtggaatt
gcttctggagacaagaggtacaactgtgcttatgatgggctaccaatagcactaccagaa
gatggctatgacttaatgcaggaactctgtccgggtttattctttggcaatgttagcact
tgctgtgatgttcagcagcttcagactttgaaaaataacttgcagctgcctctgcagttt
ctttccagatgtccatcgtgtttttacaacttgataaacctcttctgtgaactgacttgt
agtcctaatcagtctgactttttgaatgttacaagcaccataccttattatgatcctgtt
ttaaaagagaacaaaagtagcattacagagctgcagtactttattggagatcgatttgca
aatgcaatgtacaatgcctgcaaagatgtggaggctccatcaagcaatgttaaagcactg
gggctgctgtgtgggaaggatgtcaaggactgcaatgcaaccaactggattgagtacatg
tttagtaaagacaatggacaaactcctttcagcataattcctatcttttcagatgttcct
gtccatggaatgaaccctatgaataatgctaccaaaggctgtaatgagtccgtggatgat
tcaacaggaccatgcagctgtcaggactgttcaattgtttgtggtccaaaacctcaaccc
cctccattgccttctccttggctattgtttggtttggatgctgtgtatgtcatcatgtgg
atctcatacatgggctttctactcatattttttgcactggtttttggagtctggtgttac
aggaggcggcacttcgtctcggagtacaccccaattgacagcaatgtagccttttctgtg
aattctcaccgtgacaatggaaacattacctgtggtgaaaggcttggtgaaaggtttgag
aatggcctgaggatgacatttacctcatggggggctttctgcgtcagaaatccacgtcct
gttatcctcttctctgtggtcttcattgcaatgtgctgctcaggctttgtatatattaaa
gcaactacaaatcctgtagatctctggtcagccccaagcagccaggcccgtaaggaaaag
gaatactttgacacacactttgggcctttcttccgtactgaacagattattattcaagca
ccaaagagtcacccagacacctactcaccttacccatcaggagaagatgtaccttttggg
cctcctcttactaaagatattctccatcaggtactggatttgcaggatgctattgtcagc
ataactgcatcttatgacaatgagactgtaatgctgaaggatatttgcctggctcctctt
gctccctacaacaacaactgcactatactgagcgtactcaactactttcagaacagccat
tctgttctggatcacactgttggggatgagttctttgtctatgctgattaccacactcac
ttcttatactgtgttcgggctccagcatcactgaatgacacaagcttgcttcacgatccc
tgcttaggaacgtttggtggacctgtatttccatggctggtgttgggaggatatgatgat
gataactataataatgctacagctcttgtaattacttttcctgtcaacaactactacaat
gactcaaaaaagctgatgaaagccttggcatgggaaaaagaatttattaactttctgaag
aactataataattcaaacttaacaatatcattttctgctgaacggagtattgaagatgag
atcaaccgtgaaagcaacagtgatatcagcgttgtgttgataagctatatggtgatgttt
gtgtacatctcgatagctctgggacatatccagagctgtagaagactgctggtggattcg
aagatctctctaggcattgcaggcatcctgattgtactgagctcagtagcatgttctata
ggcattttcagctactttggaatcccactgacactgattgtgatagaagtaattcctttc
ttggtgctggctattggagtggacaacatcttcattatggttcagacacttcagagagat
gaacgcattcagggtgaaactctggataaacagattggcagagtcttaggagatgtggca
cccagtatgtttctctcatccttttcggagactgtggcattctttcttgggacactgtct
acgatgccagcggtccgcacgttctccctgtttgctggaatggctgtgctcatagacttt
attcttcaagtcacttgcttcgtcagtctcctgggcttggatattaagcgtcaagagagt
aatagactggatattctgtgttgcatcaagagcagtgaagaaatgagtggagtccagcgt
tctgagagcatgttatttctgttcttcaaaaatctgttttctccatatctgcttaaggat
tggatgagaccaatagtaatagcagtgtttgtgggtatcctgtcattcagtgcagcagtt
atgcacaatgtggagattggactggatcagtctctctcaatgccagatgactcctatgta
atagattacttcagccacatcagcaagtacctgcatgtgggtccccctgtctactttgtc
ctagaagagggacacaattacacctctttggaagggcagaacatggtgtgtggtggaatg
ggatgtaacaatgattcacttgtccagcaaatcttcaatgctgcggaaattggtagctac
acgaggattggctatgccccatcgtcctggattgatgactactttgactgggtgaagcca
cagtcgtcttgttgcagagtctacaataccactggacagttttgcaatgcttcagtcagc
gatccatcctgcacccgttgccgaccactgactccagaaggcaagcagagaccacagggt
gaagacttcatgacgtttttgccaatgttcctatcggacaaccctaatcctaaatgtggc
aaaggaggacatgctgcgtattactctgctgtcaactttataaacaacaaaactgaggtt
ggagccacatattttatgacttaccatactgtactgaaaacatcatctgattttattgat
gctatgaggaaagctcggattatagcagacaatattactgaaaccatgggcatcaaagag
aagaattaccgggtgtttccatacagtgtgttttatgtcttctatgaacaatacttgaca
attgtgcacgatgctatctttaacctctgcatctctttgggatcaatatttctggtgaca
actgtgcttcttggttttgaagtatgggctgctgttgtggtttcaataactattgctatg
ataatcgtcaacatgtttggagtgatgtggctctggggcatcagcttgaatgcagtttca
ttagtaaatcttgtcatgagctgcggtatcgctgtggaattctgcagtcatgtgacaagg
gcgttcaccatcagtaccaagggcagtagagtagagcgtgcagaagaagctctgtctcac
atgggcagctcagttttcagtggtatcacactgaccaaatttggaggaattgtagtattg
gctttttccaaatctcaaatcttcaagatattctacttcaggatgtatctagctatggtt
gtgctgggagcaacacatggactgatatttcttcctgttctgcttagttacataggccca
tcagtaaataaagctaaaactcgtgctgcacaagagaggaccagaggtacagaacgggag
agactcctctacttctag
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integrated database retrieval system