Sturnus vulgaris (common starling): 106850316
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Entry
106850316 CDS
T08833
Symbol
USP13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
svg
Sturnus vulgaris (common starling)
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
svg01002
]
106850316 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svg04121
]
106850316 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svg04147
]
106850316 (USP13)
Enzymes [BR:
svg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106850316 (USP13)
Peptidases and inhibitors [BR:
svg01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106850316 (USP13)
Ubiquitin system [BR:
svg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106850316 (USP13)
Exosome [BR:
svg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106850316 (USP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
UBA_9
Motif
Other DBs
NCBI-GeneID:
106850316
NCBI-ProteinID:
XP_014727026
LinkDB
All DBs
Position
Unknown
AA seq
861 aa
AA seq
DB search
MQRAALFRGGDAQMAAGDLGELLVPYMPTIRVPKSGDRVYKTECAFSYDSPDSEGGLYVC
MNTFLGFGREHIERHYRKTGQCVYLHLKRHVVEKVPGASGGALPKRRNAKLFLDLEISSD
LNSDDFEYEDEAKLIIFPDHYEISLPNIEELPALVTIACDALLSAKSPYRKQESDSWEEE
LQASKHAKTLVQLDNGVRIPPSGWKCSKCDLRENLWLNLTDGSVLCGKWFFDGSGGNGHA
MEHYKETGYPLAVKLGTITPDGADVYSFDEEEPVLDPHIAKHLAHFGIDMLQMQVTENGL
RDNDIKPRVSEWEVIQEAGMKLKPMYGPGYTGMKNLGNSCYLNAVMQAIFSIPEFQRAYV
GNLPRIFDYSPLDPTQDFNTQMAKLGHGLLSGQYSKPPMKAELIEQVMKEEHKPQHNGIS
PRMFKAFISKGHPEFSSNRQQDAQEFFLHLINLVERNPVGSENPSDVFRFLVEERTQCCQ
SRKVRYTERVDYIMQLPVAMEAATNKDELIAYELKRREAEAARRPLPELVRAKIPFRACL
QAFSEPSNVEDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWIPKKLDVSIDM
PDFLDISHLRARGLQPGEEELPDIAPPIVIPDDPKDHMANHFVESLDIDESSVMQLAEMG
FPLEACRKAVYYTGNLGAEVAFNWIIAHMEEPDFAEPLVTPAFGEVASSGAAALGAVGLD
NQPPEEMVAIIISMGFQRNLAIQALKATNNNLERALEWIFSHPDPEEESDPALDTVDMEN
NANANILAETGSEGPRIKDGPGRYELFGFISHMGTSTMSGHYVCHLRKEGRWVIYNDLRV
CASERPPKDLGYIYFYHRIPS
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgggccgcgctcttccgcggcggcgatgcgcagatggccgccggggacctgggc
gagctgctcgtcccctacatgcccacgatccgggtgcccaagtcaggggaccgggtctac
aagacggagtgtgccttctcctacgactcgcccgattcagaaggaggtctctatgtgtgc
atgaacacgtttctgggatttggaagggagcacatcgagaggcattaccggaaaacagga
cagtgtgtctacctgcacctgaaacgacacgtggtagagaaggtaccaggagcatctggt
ggagctttaccaaaaaggaggaatgctaagctatttttagatctggagataagcagtgat
ctcaacagtgatgactttgagtatgaggatgaagcaaaacttattatctttcctgatcac
tatgaaatctcattacccaacatagaagagctaccagcattggtgacgatagcttgtgat
gcactcctcagtgcaaaatcaccctacaggaagcaggaatctgactcctgggaagaagag
ttgcaggcatctaaacatgctaaaacacttgtacagttagacaatggtgttagaattcct
cccagtgggtggaagtgctccaagtgtgacctgcgggagaacctgtggctgaacctgacc
gatggctctgtgctctgtgggaagtggttcttcgatggcagcgggggcaatgggcatgcc
atggagcactacaaggagacaggttatcccctggcagtgaagctgggaaccatcactcct
gatggagcagatgtctattcctttgatgaagaggagccggttttagatccacacatagca
aaacatttggcacactttggaattgatatgctgcagatgcaagtgacagagaatgggcta
agagataatgacataaagccaagagtctcagaatgggaagtgattcaggaagctggcatg
aagctcaagcccatgtatggcccaggatacactggcatgaagaacctgggaaatagctgc
tacctcaatgctgtcatgcaagccattttcagcatcccagagttccagcgagcgtatgtg
ggaaaccttccacgaatatttgactactcccctcttgatccaacacaagatttcaacact
cagatggctaaactgggacatggactcctttcaggccaatattctaagccacccatgaaa
gctgagctcattgagcaggtgatgaaagaagaacacaagcctcaacacaatggaatatct
cctcgaatgttcaaggcttttataagtaaaggccacccagaattttcatctaatagacag
caagacgcacaggaatttttcctacatcttataaatctagtagagaggaaccctgtgggt
tcagaaaaccccagtgatgttttccggttcctggtggaggagcgcacacagtgctgccag
tccaggaaggtgcgctacaccgagagggtggactacatcatgcagttacctgtggccatg
gaggcagcaacaaacaaagatgaattaattgcctatgaattgaagaggagagaagcagaa
gctgcaaggagacctctgccagagctggtccgtgccaagatcccatttagagcatgtctg
caggccttctctgaaccaagcaacgtagaggatttctggagcagtgcccttcaagcaaaa
tctgcaggagttaagacttcccgttttgcttcctttcctgagtacttagtggtgcagata
aagaaattcacctttggccttgactggatacccaaaaagcttgatgtttctatagacatg
ccagatttcctggatatcagtcatcttcgggccagggggctccagccaggagaagaggaa
ctcccagacattgctcctcccattgtcattcccgatgacccaaaagatcacatggcgaac
catttcgtggagtccctagatattgatgagtcttcagttatgcagctggcagagatgggc
tttcctttggaagcgtgtcggaaagctgtgtactatacaggcaacctgggtgctgaagtt
gctttcaactggatcattgcacacatggaagaaccagactttgctgagccactggtcaca
cctgcatttggagaagttgcttccagtggggcagctgctttaggagctgtagggctagat
aaccagcctcctgaagagatggttgcaattatcatttccatgggattccaaaggaatctg
gcgattcaggcgctgaaggcaacaaacaataacttggagcgtgcactggagtggatcttc
agccaccctgaccctgaggaggaaagtgaccctgccttggacacagtggatatggagaac
aatgctaatgccaatatccttgcagagacagggtctgagggacccaggatcaaagacggc
cctggaagatatgagctgtttgggttcatcagccacatgggaacatccacgatgagtggc
cactatgtttgtcacctcagaaaggaaggaagatgggtgatctacaacgaccttagagtc
tgtgcctcagaacgacctcccaaagacctgggctacatttatttttaccacaggatacca
agttag
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integrated database retrieval system
