Sturnus vulgaris (common starling): 106850813
Help
Entry
106850813 CDS
T08833
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106850813 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svg03019
]
106850813 (DROSHA)
03009 Ribosome biogenesis [BR:
svg03009
]
106850813 (DROSHA)
03036 Chromosome and associated proteins [BR:
svg03036
]
106850813 (DROSHA)
Enzymes [BR:
svg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
106850813 (DROSHA)
Messenger RNA biogenesis [BR:
svg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
106850813 (DROSHA)
Ribosome biogenesis [BR:
svg03009
]
Eukaryotic type
90S particles
RNase
106850813 (DROSHA)
Prokaryotic type
rRNA processing factors
106850813 (DROSHA)
Chromosome and associated proteins [BR:
svg03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
106850813 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
YcaO
Motif
Other DBs
NCBI-GeneID:
106850813
NCBI-ProteinID:
XP_014727893
LinkDB
All DBs
Position
Unknown
AA seq
1337 aa
AA seq
DB search
MSFHSGRGCPRGQGGPGARTSTQTYRPQNLRQLHPQQPSVQYQYEQQAAPPTTYSNPPPT
TGYMPPRPDFVPYPPPVPPSTQNPISQCPMRPPFPNHQMRQSFPVPPCFPPTPPPVPNPS
NTPVPGTPAGQSTFPYMMPPPTVPHPPPPPVLPQQVSYQPVYSAGYSQQSFPPPGFSSYQ
HGSGSFPSSTASSSASSSHFRHTGQYQGDKSQSDRRSPDRSKHYDEHRHREHGHIHGDRH
RSANHGDRRDRGRSPDRRRQESSRHRTDYDRGRISPHHRSYERNRERERERHRHRDSRRS
PSPDRSYKKDYKRAGSRSPSRERKRTRWEEDRERWSENQSSSKEKNYTAVKDKESEENAS
EKNEEEDEELLKPVWVRCTHSESYYSNDPMDQVGDSTVVGTSKLRDLYERFDEELGKRQA
KAKAARPPWEPPKTKLDEDLESSSESECDSEDDSSCSSSSDSDVIDVIAEIKRKKAHPDR
LHEELWYNDPGQMNDGPLCKCSAKARRTGIRHGIYPGEEPIKPCRPMTNNAGRLYHYRIT
VSPPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMP
ENFCVRGLELFSSYLFKDILELYDWNLKGPSLENDSISCPRYHFMPRFVRFLPDGGKEVL
SMHQILLYLLRCSKALVPEEEIANMLQWEELEWQKYAEECKGMIVTSPGMKPSSVRIDQL
DREQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQADKQK
LSQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHVRYHQCLM
HLDKLIGYTFRDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHIHM
RKKGINTLINIMSRLGQDDPAPSRINHNERLEFLGDAVVEFLTSVHLYYLFPTLEEGGLA
TYRTAIVQNQHLAMLAKKLELERFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSL
EEAKQLFGRLLFNEKDLRDVWLNYPLHPLQLQESNTDRQLIETSPVLQKLTEFEEAIGVI
FTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLL
RSSLVNNRTQAKVAEELGMQEFAITNDKTKRPVTLRTKTLADLLESFIAALYIDKDLEYV
HTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHART
YTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKELRW
EREHQERESEETEEARK
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccattctgggcgaggatgtccccgtggccaggggggaccaggagcaagaact
tcaacgcagacctaccgcccccagaacctccggcagcttcacccgcagcagccctccgtg
cagtaccagtatgagcagcaagctgcccctccaacaacctactccaaccctcctccaacc
accggttacatgcctcccaggccagactttgtgccctatcctcctccagtgcccccttct
acacaaaatcccatcagccagtgtcccatgaggccgccgtttccaaaccaccagatgagg
cagagcttcccggtgcctccatgtttccctcccactcctccaccagtgccaaatcccagc
aacactcccgtgccaggaacacctgctgggcaaagcacctttccttacatgatgcctccc
cccacggtaccacaccctcccccgcctccagtcctgccacagcaagtcagctaccagccc
gtgtactcggcggggtactcgcagcagtccttcccgccgcccggcttcagcagctaccag
cacggctccggctccttccccagcagcactgccagcagcagcgccagcagcagccacttc
cggcacacggggcagtaccagggagacaagtcccaaagtgaccggcgctccccggacagg
agcaagcactacgatgagcaccggcaccgcgagcacggccacattcacggcgacaggcac
cgctccgctaaccacggcgatcgtcgcgatcgcggccgcagcccggacaggaggaggcag
gaaagcagtcggcaccggacagattacgacagaggaaggatatcacctcatcacagaagt
tatgagagaaacagggaacgggagagggagaggcatcggcaccgtgacagcagaagatcg
ccatcaccggacagatcctataaaaaggattacaagagagcaggaagccggtctccaagc
agagagagaaagagaacccgatgggaggaggacagagaaaggtggtctgagaaccagagc
tccagtaaagagaaaaattatactgctgtcaaagacaaagaatcagaagagaatgcatct
gaaaaaaatgaagaggaggatgaggaattgcttaagccagtctgggttcgctgtacccat
tctgaaagctattattccaatgaccctatggatcaagtgggtgactctactgtggtagga
acaagcaagctccgggatctgtatgaaaggtttgatgaggagttaggaaagcgacaggca
aaggccaaagcagccaggccaccatgggagccaccaaaaaccaagctggatgaagattta
gagagctccagtgagtcagagtgtgactctgaagatgacagcagctgctccagcagttca
gattcggatgttattgacgtcattgcagaaattaagcgtaaaaaagcacaccctgatcgt
ctccacgaggaattgtggtacaatgatccaggacagatgaatgatggacctttgtgcaag
tgcagtgctaaagcccggcgaacaggaataagacacggcatttatcctggcgaagagccc
attaaaccatgtcgccccatgaccaacaatgctggaagactgtaccactaccgaattact
gtgtcacctcccacaaatttcttaacagacagacctactgttattgagtatgatgaccat
gaatatatctttgaagggttctccatgtttgcacatgccccactaacaaacattcctcta
tgcaaagtaatcaggtttaacattgactatacaattcacttcattgaggagatgatgcct
gagaatttttgtgtgagaggccttgagctgttctcttcgtatctattcaaagatattttg
gagttgtatgactggaatcttaaaggtccttcacttgaaaatgattctatttcctgtccc
agatatcacttcatgccgcggtttgtgagatttcttccagatggaggaaaagaagtactc
tcaatgcatcagattcttctctacttgttacgatgcagtaaagctctggtgcctgaagag
gagattgccaacatgcttcagtgggaagaactggaatggcagaagtatgcagaagaatgc
aaagggatgattgttaccagccctggcatgaaacccagctcagttcgtattgatcaacta
gaccgcgaacaattcaatcccgatgtaattactttccctattattgtgcactttgggata
cgacctgctcaactcagttatgctggagatcctcaataccaaaagctgtggaagagttat
gtgaagctgcgtcacctactggctaatagtcccaaagtcaaacaggctgataaacagaaa
ttatcacaaagagaggaagcactgcagaaaattcgtcagaagaacacaatgagacgtgaa
gtgactgtggagttgagcagccaaggattctggaaaacagggatacgctctgacgtctgc
cagcatgcaatgatgcttcctgtcctgacccaccatgtgcgctaccatcagtgtctgatg
cacttggacaaattgataggctacacttttcgagataggtgcttactgcagcttgcaatg
actcacccaagtcatcatttaaattttgggatgaatccggatcatgccagaaattcctta
tccaactgtgggattcgacagcccaagtatggagatagaaaagttcaccatatacacatg
agaaaaaaagggataaacaccctgataaatattatgtcccgcttgggacaggatgatcca
gctccttccaggattaaccacaatgagcgtttagaatttctgggcgatgctgtggtggag
ttcttaacaagtgtccacttatactacctgtttcccactctggaggaaggagggctagct
acgtaccgcactgccatagtgcagaaccaacacctggccatgctggctaagaagctggaa
ctggaacgattcatgctctatgctcatggtccagacctttgcagggagtcagatctccgc
catgccatggccaactgctttgaagccctaataggagctgtttatctagagggaagccta
gaagaagcaaaacaattatttggacgtttgctcttcaatgaaaaggacctgcgggatgta
tggcttaattatccactacacccactccaactgcaggagtccaatactgataggcagctc
attgagacctctccagttcttcaaaagcttacggagtttgaggaggcaattggagtcatc
tttactcacgttcggcttctagcacgtgcattcactctgaggacagtaggctttaaccat
ctgactctaggccacaaccagaggatggaattcctgggtgactctataatgcagttggta
gccacagagtatttattcatacatttccccgatcatcatgaagggcacttaacgctgttg
agaagttctttggtgaacaacaggacacaggccaaggtggcagaagagctgggcatgcaa
gagtttgccatcactaacgacaagacaaaaagacctgtaactcttcgaactaagactttg
gctgatctcttggaatcctttattgctgccctgtacattgataaagatttggaatacgtt
cacactttcatgaatgtttgcttttttccacggctaaaggagtttattttaaatcaagat
tggaatgatcctaaatctcagcttcagcagtgctgcttgactctcaggacagaaggaaaa
gagccggacattcctctttacaagaccttgcagacagtgggaccttctcatgccaggaca
tacacagtagctgtttacttcaaaggggaaagaataggatgtggtaaaggtccaagtatt
cagcaagcagaaatgggagctgcaatggacgcacttgaaaaatataactttccccagatg
gcccatcagaaacggttcattgaacggaagtacagacaagagttgaaagaattgaggtgg
gaaagagagcatcaagagagagagtcagaggagactgaagaagcaaggaaataa
DBGET
integrated database retrieval system
