Sturnus vulgaris (common starling): 106850877
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Entry
106850877 CDS
T08833
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106850877 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
svg04091
]
106850877 (FREM1)
Lectins [BR:
svg04091
]
C-Type lectins
Lecticans
106850877 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
106850877
NCBI-ProteinID:
XP_014728412
LinkDB
All DBs
Position
Unknown
AA seq
2177 aa
AA seq
DB search
MKPFEKSWFFLLLPVMLRVVCSSFISVNLGLKVMKGQSVFLSEEDLKFSIPREKDACKVE
VVINEPITQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDMVMLRVYRFTETETYVETF
TLHVQLLEPDCNIIKMRSHALEVPEYYGLSRVIDKNVLTFDFDRKINLDCTISIISSETH
LPAHGQLIAGKVQQKHFHGDQPWSFFPGTKHSLGQKCRNGSCTLGLGVINNKKMSCEEFL
RMGIQYQHLDPPSPDIDYIPVRLDLSDSRSKTLHKTEYAWLPVQIRGAIPNQIPKAAPMA
KFVLEVDQFILTPITTTTIDAEDKETPKSLLIFNITKPPPQGFITHLSDHTKTVGSFTWK
DLSDMLIAYQPPNNSHTERRNYEVEFEVHDFYFERSLPITVHLSIRTTDTNAPRVSWNTG
LNLLEGQSRPITWQHFQIVDNDDIQNVRLVTADGLQHGRLSVRGGKGFMFTVSDIQAGVV
RYHHDDSDSTKDFVVFRIFDGSHSIRHKFPINILPKDDSPPFLISNVVIEVHEGQMILIQ
GSMLHASDLDSSDDYILFNITKPSQAGEIMKKPGPNLIGYSVNSFLQRDLFNGMIYYHHL
GGEVFEDSLEFVLCDSHDPPNLSEPQVMMVHIIPVDDQLPREAPGVTRHLVVKETDISHL
TKKHLHFIDVEEQDRELTYTITTSPFFSCTHGYSDAGKLFMVDTIPRLVKDPAALPVRSF
TQHAVNYMKIAYMPPMHDIGPEPQQVQFIFSVSNQHGGTLYGICFNITILPVDNQAPQVF
TTHLRVEEGGMTSITEEHILISDADTKQDRLFLLLQRQPQHGVVELDDIPMNGGDRLSCE
DLRTLAVRYHHDGSDTLTDDVFFAATDGIHFVEFILQVKVLPVNDELPVMQTGLAPVLHC
LEGEEVVLSSEYIHATDADSDDMELMFMLARQPHHGLVRKAGIAVDHFSQADIIAGLVTY
KHTGGEIGLTPSMEILTLIVSDGEAGLDVKDCCYDGPPSPPVSRDDPFPVYDLNITVLPV
DNQPPSIATGASFVVEEGSSAALTTNHLFATDPDTTADDLEFVLVSPPQFGYIENILPSP
GFEKSNVGISIGSFQLKHLKAMNINYVQARHLRMEPTEDNFVFYVTDGLHRSAETPFFVL
ISPTNDEVPEFIARNITVQEGAMKELDLSVINAVDLDVPQDPLVFGVVQRPSYGFLINGV
HGSDVLHYKELINHDHHNHGLLVHDFSMELLRNGMKLMYMHDNSENLNDSFKIQLSDGKH
KVLRTISVKVIPVNDEKPVLSKKNDIEVNIGETQIISSAVLSAEDKDTSRERIHYLFERL
PENGQLQLKVGQGWVTLQTGMKCTQEELDMNLVRYVHTGTVGSKKKDSFTFYLWDGYNRS
PAVDFYINIKDLEKGDIAIFTKLLRVPKGDRSYITTDVLLALDGTDKPEELLYVITSPPQ
YGQIEYVSYPGIPIASFSQMDVARQIVCYIHKTKAVVHEDAFRFIISNGLRTKHGTFKII
LEAADQALPTLSRNMGLRITEGAMILLTPDVLQLSDPDTAKENLTFLLAQLPQYGHLCYH
GTVLLQHNFTQQDVDNRDVAYKHRGGNSQIDRFTFVATDRTNQGFIVNGRVQSEPVAFTI
QVDPLDKVAPKIIHLHCFSDVELLKNGNYGIYITARSLRASDPNTEDDKIIFKILRGPHY
GHLENITTGEFIQEGFSQKDLNSKIILYVINQSQEVNSDNLEFQVSDASGNSAAPQRLEL
QWSRIEMLQTEYEVCENMGVVSLKITRAGHSGESAFITVKVNEISARLGKDFTVTPSKLV
QFDPGVSTKMWNIAITYDGLEEDDEVFEVVLNSPVNAVLGTRTKAVVKILDSKGGQCSYS
RSGQSKHDFWGRSTLFAVSLGSSSPSKPGNVSLEGIPLPPSKRMREHGGGLQQEHSLANR
SRTRLRVTGNGRIVHPSSVFRNETDVIFKYHGIVSLKREDDTSSAEANKKTQPQINVISS
RKTEIPQADKAELAAEPRSRHKDFYSFQKACTPDLKGLLHYEESTQKLFQCDGITWKFWN
SQSKEVTVKKCPSGWTYHEGSCYFLVVNHKVTWDTAAQACREQYLGSLTSVTNEQHMQWL
WDFSGRMPFWIGLNDQVNPGHWEWNGGDPVTYINWRRGSYHFPIRGRNCVFVQKRGKWQA
TDCKKVKPNSYICSRKL
NT seq
6534 nt
NT seq
+upstream
nt +downstream
nt
atgaagccctttgagaaaagctggttctttctactgctgcctgtcatgttaagagtcgtg
tgctcttcctttattagtgtgaaccttgggttgaaagtgatgaagggacagtctgtcttc
ctgtcagaagaagacctcaagttttccatccccagagagaaggatgcctgcaaagtagaa
gttgtgattaacgagccaataacgcagagggttgggaaacttactccacaggtttttgac
tgtcacttccttcctaatgaagtcaaatatacccacaatggatgtccaattttagatgaa
gacatggtcatgcttcgggtgtacaggtttacagaaacggaaacatatgtagaaacattc
acccttcatgtgcagttacttgagccagactgtaacatcataaaaatgcgctcccatgct
ttggaggtccctgaatactacggtctgtctagggtgattgacaagaatgtcctcaccttt
gattttgacaggaagataaacctggattgcaccatatccataatctcttcggaaactcac
ctgcctgctcacggccagcttattgcaggaaaagtgcagcaaaagcactttcatggagat
cagccatggagcttcttccctggcactaagcacagcctgggccaaaagtgcagaaatggg
agctgtacactgggactaggagttattaacaacaaaaagatgagctgtgaagaatttctg
aggatgggcattcagtatcaacaccttgaccccccctcacctgacattgactatattcct
gtgaggttggatctctcagacagcagaagcaaaactctgcacaagacggagtatgcgtgg
ctcccggttcagattagaggtgccattcccaaccaaatacccaaagctgccccaatggca
aagtttgtcctggaagtagatcaatttattttaacccctattacaaccacaaccattgat
gctgaagacaaggaaactccaaagtctctgcttatattcaacattaccaagccacctcca
cagggttttatcactcacctctctgaccacacaaaaactgttggctccttcacgtggaag
gatctcagtgacatgctcattgcttatcagcctccaaataacagccacacagagaggagg
aattatgaggtggaatttgaggtgcatgacttctactttgaaaggagtttgccaatcact
gtgcatctttctatcagaacaacggatacaaatgcccctcgcgtttcatggaacacaggc
ctcaacctcctagaagggcaatcccgacccatcacatggcaacacttccaaattgtagac
aacgatgacatccaaaatgttcgcttggtcacagctgatggattacagcatgggcggctg
tcagtgagaggagggaaaggattcatgttcactgtctctgacattcaggctggcgttgtt
cgctaccatcatgatgacagcgattcgactaaggactttgttgtgtttagaatttttgat
ggctcccacagtattcgccataagtttccaataaatatcctccctaaagatgatagccct
ccatttctgatcagcaatgtggtcattgaagttcacgagggacagatgatcctcattcag
ggctccatgcttcatgcttcggacttggattccagtgatgactacatactattcaatatt
accaagccatcacaggctggagaaatcatgaagaaaccaggaccaaacttgatagggtat
tctgtcaacagttttcttcagagggatctatttaatggaatgatttattatcatcacttg
ggaggagaagtatttgaagattcccttgaatttgtgctatgtgatagccatgatcctcca
aatctctctgagccacaggtgatgatggttcacattatccctgtggatgatcagctaccc
agagaagctccaggagtgacccgtcacctggttgttaaggagactgacatttctcaccta
actaagaaacatctccacttcatagatgtggaagagcaagacagggagctcacatacacc
ataaccacttccccatttttctcttgcacccatggttattcagatgctggtaagctgttt
atggtggacaccatccccagactggtcaaggatcctgctgctcttccagtgcggtccttt
actcagcatgctgtgaactatatgaaaattgcttacatgccacccatgcatgacatcgga
cctgaaccccagcaagtccagtttattttttctgtcagcaatcagcatggaggcactttg
tatgggatctgcttcaatattacaattcttcctgtagacaaccaagccccacaggttttt
acaactcatttgagagtggaagagggtggcatgacctctattacagaggaacacattctc
atctctgatgcagacacaaaacaagaccgtctcttcctgctcctgcagaggcagccgcag
catggggttgtggagctggatgacattcccatgaatggaggtgacaggctttcctgtgag
gacctgcgtaccctggcagtcagataccatcatgacggctctgacactctgactgatgat
gttttctttgcagccacagatggcatccattttgtagagttcatcctgcaggttaaggtg
ttgcctgtgaatgatgagctacctgtcatgcaaacaggccttgctcccgtgctccactgc
ctggagggtgaagaagtagtcctctcctcagagtacattcatgccacagatgcagacagt
gatgacatggagctgatgttcatgctggcccgccagccacaccatgggctagtgaggaaa
gctggcattgctgtggaccatttctcccaagctgatatcattgctggtttagtcacatac
aagcacactggtggtgagattggcctgactccttccatggagatcttaaccttgattgtc
tctgatggtgaggctggcctagatgtgaaagactgctgttatgatggacctccttctcct
ccagtttcacgtgatgatccatttcctgtctatgaccttaacatcactgtacttccagtg
gacaaccagcctccatcaattgcaactggtgcaagctttgtggtggaggagggctcctca
gcagcccttactaccaatcatttgtttgccaccgaccctgacaccactgcagatgactta
gagtttgtgttggtttctcctccccagtttggttacattgaaaatatactgccttctcct
gggtttgagaagagcaacgttggaataagcataggttcatttcaactgaagcacctgaaa
gccatgaatataaactacgttcaagccaggcacttgcgaatggaaccaacagaagacaac
tttgtattttatgtcactgatgggttgcatcgctctgcagagactccattttttgtgcta
atcagcccaaccaatgatgaagttccagaattcatagccaggaatattactgttcaagaa
ggggctatgaaggagctggatctgtctgttatcaatgcagttgatctggatgtgcctcaa
gaccctctggtatttggggttgtgcagaggccttcgtatgggttcctcatcaatggtgtt
cacggcagtgacgttctacactataaagagttaattaaccatgatcaccacaaccatggc
ttgcttgttcatgacttttccatggagctacttaggaatggaatgaagctgatgtacatg
catgacaactctgaaaacctcaatgacagctttaaaattcagctatcagatggaaagcat
aaagtcctcagaaccatttcagtaaaagtcattccagttaatgatgagaaaccagtactg
agcaagaagaatgatatagaggtgaacataggtgaaactcaaataatttctagcgctgtt
ctgtcagcagaagataaagatacctccagggagagaattcactacttatttgaaagactt
ccagaaaatggtcagcttcagctcaaggtaggacaagggtgggtgactctccaaactgga
atgaagtgcactcaggaagagctggacatgaaccttgtgagatatgtccacacaggaact
gtggggtccaagaaaaaagacagcttcacattttacctctgggatgggtacaacagatcc
ccagctgtggacttctacataaatatcaaggacttggaaaagggagacattgctattttt
acaaaacttcttagagtgccaaaaggagatcgcagctacattacaactgacgtcctcctt
gcactggatggtactgacaagccagaggagctcctttatgtgattacctccccaccccag
tatggacaaatagagtatgtcagctatcctggcatccccattgcgagctttagtcaaatg
gatgtagcacgacagattgtctgctacattcacaaaaccaaggcagttgttcatgaagat
gcattcagattcatcatcagcaatggactgaggactaagcatgggacattcaagatcatc
ttggaggcagctgaccaggctttgcccactctgtctaggaacatggggttaagaataaca
gaaggagctatgatacttcttactcctgatgtgctgcagctttcagacccagatactgcg
aaagaaaaccttaccttcctcttggctcagctcccccagtatggtcacctctgctatcat
gggactgtgctactgcagcacaatttcacacagcaagatgtggacaacagggatgttgca
tacaagcaccgaggtgggaattcccagattgacagatttacgtttgttgccacagatagg
actaaccaaggcttcatcgtgaatgggagggtgcagagcgagccagtggcattcaccatc
caggtggaccctttggacaaagtggcaccaaaaattattcatctccattgcttttctgat
gtggaactcctgaagaatggcaattatgggatctacattactgccaggtccctgagggca
tctgaccccaatacagaagatgacaaaataatttttaagattttgcgaggtcctcattat
ggccacctggaaaatataacaacaggtgaattcattcaggaaggatttagccaaaaggat
ttaaacagcaaaatcatactttatgtcatcaaccaatcacaggaagtgaattcagacaac
ttggagttccaagtgtcagatgccagtggaaactctgcagcaccccaaaggctggagcta
cagtggtctcgaattgaaatgctacagactgaatatgaggtgtgtgaaaacatgggagtg
gtgtctctgaaaatcaccagggcaggacactcaggagagtctgcctttataactgtgaag
gtcaatgaaatatctgctaggctgggaaaggacttcaccgtgactccctccaagcttgtt
cagtttgatccaggagtgtcaaccaagatgtggaatatagcaattacctatgacggatta
gaggaagacgatgaagtctttgaagtggttctgaactcccctgtgaatgctgttcttggc
acacggacaaaagctgtagtgaaaattttggactcaaaaggaggtcaatgcagctattcc
cgttctggccaaagcaagcatgacttctgggggagaagcacgctgtttgcagtttccttg
ggttcctcatcaccttctaagcctggcaatgtttccttggaagggatcccactgcctcct
tccaaaaggatgagagagcacggagggggcctgcagcaggagcacagcttggcaaatagg
tccaggactaggctgagagtaactggaaatggcagaatagttcatccttcatctgtattt
agaaatgaaacagatgtgattttcaaatatcacgggattgtatcactcaaaagagaggat
gacacctcctcagctgaagccaacaagaagacacaaccacagataaacgtcatctcctcc
aggaaaacagaaatcccacaggctgataaggcagaacttgcagctgaaccaagatcaaga
cataaggacttctactcttttcaaaaggcttgtacaccagatttaaagggtctcttgcat
tatgaagaaagcacacagaagttatttcagtgtgatgggataacatggaaattctggaat
tcccaaagcaaggaggtaactgtgaagaaatgtccctctggatggacttatcatgagggc
agctgctacttcctggtagtgaatcacaaggtcacctgggacactgctgctcaggcttgc
agagaacagtacctggggagtctaacaagtgtgactaatgagcaacacatgcagtggctg
tgggacttcagtgggaggatgcccttttggataggtttgaacgaccaagtcaatcctgga
cattgggagtggaatggaggggaccctgtaacctacataaactggagaagaggctcctac
cactttcccataagaggaagaaattgtgtatttgtgcagaagcgaggaaaatggcaagca
actgactgcaagaaggtcaaaccaaacagctatatatgttcacgaaagttgtaa
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integrated database retrieval system
