KEGG   Sturnus vulgaris (common starling): 106851108
Entry
106851108         CDS       T08833                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
svg  Sturnus vulgaris (common starling)
Brite
KEGG Orthology (KO) [BR:svg00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:svg01009]
    106851108 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:svg03036]
    106851108 (KDM5B)
Enzymes [BR:svg01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     106851108 (KDM5B)
Protein phosphatases and associated proteins [BR:svg01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     106851108 (KDM5B)
Chromosome and associated proteins [BR:svg03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    106851108 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_2 Lipoprotein_20 zf-PHD-like PHD_5
Other DBs
NCBI-GeneID: 106851108
NCBI-ProteinID: XP_014728339
LinkDB
Position
Unknown
AA seq 1522 aa
MAEFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFACDVDKLH
FTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKILDLFQLNRLVAEQGG
FDVVCKERKWTKIATRMGFAPGKAVGSHIRAHYERILYPYNLFQSGASLLCLQKPDLSSD
TKDKEYKPHDIPQRQSVPPSESCPPARRAKRLTPEATNVKSETDPPEARTHNLRRRMGCA
PPKSEGDKEMRSVVKLPEKKELSGEPEKDKSKVRSKKPTNAVDLYVCLLCGSGNDEDRLL
LCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCLAQECNKPQEAFGFEQAARDYTLRTFGEM
ADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPVRGGKF
KVRPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWS
YSINYLHWGEPKTWYGAPGYAAEQLEDVMKKLAPELFESQPDLLHQLVTIMNPNTLMAHG
VPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLNRYC
VFSHDEMICKMASKADVLDVVVASTVQKDMAIMIEEEKRLREKVDKLGVTDSERVMFELF
PDDERQCLKCKTTCFMSAVYCPCKPGLLVCLYHVEDLCSCPTYKYKLGYRYTLEELYPMM
NALKMRAESYNEWASNVNEALEAKINNKKSLISFKALIEESEMKKFPDNDLLRHLRLVTQ
DADKCASVAQQLLNGKRQTRYRSGGGKCQNQLTVNELRLFVRQLYALPCVLSQTPLLKDL
LDRVEAFQQQSQKLLSEEMPSAAELQELLDVSFDFDVDLPQLAELRARLEQARWLEDVQL
ASSEHGSLTLDDMRRLIDSGVGLAPYPAVEKAMAKLQELLTVSEHWDDKARNLIKARPRQ
SLSSLAAAVKELEEIPAYLPNGAALKDAVQKAKDWLQEVEALQAGGRVPVLDTLAELVTR
GRSIPVHLDYLPRLEALVAEVQAWKECAANTFLCENSPYSLLEVLCPWCDIGMLSLKRKQ
KKLKEPVPSGKKKSTKLETLSDLERALSESKDTASAMATLGEARLREMEALRALRAANEG
KALSSEEDAELKVCLCQKEPAAPMIQCELCRGFFHTGCVPVPGAAPGPRVWLCPQCHRSQ
KPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQMLYSGNLKRIQDKVGSG
LLYSRWQASAGQLPETNKVSQTIGAMSFSMPHDWDNRTMYLHSPFSTGQHCIPLHVISTE
LDELMMEAQLLQVSLPEIQELYQALFTKQSPALQPEQRSPSAATSEKNECCRGKKDGMSY
MERKLKRRFERESFCGEKRARVKKMRTPKKKKLKLSHSKDQCSNKLERERERLLELQRSS
DSHLLPSDTSSFSEQEDSEDEDAICPAVNCLQPEGDEVDWVQCDGSCNQWFHQVCVGISP
EMAEKEDYICASCGGKDAQYRK
NT seq 4569 nt   +upstreamnt  +downstreamnt
atggccgagttcctgcccccgcccgagtgccctgtcttcgagcctagctgggaggagttc
gccgaccccttcgccttcatccacaagatccggcccatcgccgagcagaccggcatctgc
aaggtgcggccgccgccggactggcagcctccatttgcatgcgatgtcgacaagcttcac
ttcacaccaaggatccagaggctcaatgaactggaggcccaaactcgtgtaaagctgaat
tttctggaccagattgcaaagttttgggagcttcaaggatgcacactgaaaattccacat
gtggagaggaagatcttggatttatttcagcttaacagactagttgcagaacaaggagga
tttgatgtggtttgcaaggagagaaaatggaccaaaatagccacgaggatgggctttgct
cctggcaaagccgtgggctcgcacatccgcgcgcattacgagagaattctctacccctac
aacttgttccagtcgggagcgagtctcctgtgcttgcagaagccagatctgagcagtgac
acgaaggacaaggagtacaagccccacgacatccctcagcggcagtcggtgccaccgtcc
gagagctgcccgcccgcccggcgcgccaagcgcctgacacccgaggcaaccaatgttaaa
agtgagactgaccctccagaagccagaactcacaatctgagacgcagaatgggctgtgcc
cctccaaagagtgaaggtgacaaggaaatgcgcagtgtggtgaaactccctgagaagaaa
gaactttctggggagccagagaaggacaaatccaaagtcagatctaaaaaacctaccaat
gctgtggatttgtatgtgtgtctcctgtgtggcagtggcaatgatgaggaccgactgctg
ctgtgtgatggctgtgatgacagttaccacaccttctgtttaattccacccctccatgat
gttcccaaaggggactggaggtgtcctcagtgtctggctcaggagtgtaacaagcctcaa
gaagcctttgggtttgaacaagcagcacgggactacaccctgcgcacgtttggggaaatg
gccgatgccttcaagtcagactattttaacatgccagtgcacatggtccccactgagctg
gttgaaaaagaattttggagacttgtcagtaccattgaagaggatgtgacagtggaatat
ggagctgacattgcttcgaaggagtttggcagtggcttcccagttagaggtgggaagttt
aaagttagaccagaagaagaggaataccttgatagtggctggaatttaaacaacatgcct
gtgatggagcagtctgtgcttgctcacatcactgcggacatctgtgggatgaaattgccc
tggctgtacgtaggaatgtgcttttcctcattttgttggcatatagaagaccattggagc
tattccattaactatctgcattggggggagcctaaaacgtggtatggagccccagggtac
gcagctgagcagctggaggatgtaatgaagaaacttgctccagagctatttgagtcccag
ccagatctcttgcaccaacttgtcaccataatgaacccgaacactttgatggcccacggg
gtgcctgtgtacaggaccaaccagtgtgctggggagtttgtgatcacctttcccagagct
taccacagcggcttcaaccagggcttcaactttgctgaagctgtgaacttctgcaccgta
gactggctgcccctgggccggcagtgcgtggagcattaccgcctgctcaaccgctactgc
gtcttctcccacgacgagatgatctgcaaaatggcttccaaagcagatgtcctggacgtt
gtggtggcatctacagtccagaaagacatggctattatgattgaagaggagaagaggttg
cgtgagaaggttgataaattgggagtgactgactcagagagggtgatgtttgagctgttc
cctgatgatgagcgacagtgcctgaagtgtaaaaccacctgcttcatgtcagcagtttat
tgtccttgcaaacctgggttgttggtgtgcttgtaccatgtcgaggacctctgctcctgt
cccacctacaaatacaagctggggtaccgctacaccctggaggagctgtacccgatgatg
aacgcgctcaagatgcgcgcggagtcctacaacgagtgggcttccaacgtcaacgaggcc
ctggaggcaaagatcaacaacaaaaaaagtctcatcagttttaaggctttgatagaagaa
tcagaaatgaaaaagttcccagacaatgacctgctgcgacacctccggctggtgacacag
gatgcagacaagtgtgcctcggtggcccaacagctgctgaatggcaagaggcagaccagg
taccgctccggaggggggaagtgtcagaaccagctgacggtgaacgagctgcgcctgttt
gtcaggcagctctatgccctgccctgcgtgctcagccagacaccactgctcaaggatctc
cttgaccgtgtggaagctttccaacagcaaagccagaagctcctttctgaagagatgccc
agtgctgcggagctgcaggagctgctggatgtcagctttgactttgacgtggacctgccg
cagctggcggagctgcgggcgcggctggagcaggcgcgctggctggaggacgtgcagctg
gcgagctccgagcacggctcgctcactctggatgacatgaggcgcctcattgactcgggc
gtggggctcgcgccatacccggccgtggagaaggccatggcgaagctgcaggagctgctc
accgtgtccgagcactgggatgacaaagccaggaacctgataaaggccaggccccggcag
tccctgagcagcctggcagcagcagtgaaggaactggaggagatcccagcctacctccca
aatggagcagcactgaaggatgcagtgcagaaagccaaggattggctgcaggaggtggag
gctctgcaggctgggggccgtgtgcccgtgctggacacgctggcagagctcgtcacgaga
ggtcgatccatcccagtgcacctggattacctgcccaggctggaggccctggtggctgaa
gtgcaggcgtggaaggagtgtgcagcaaacacgttcctgtgtgagaactctccgtattcc
ctcctggaggtgttgtgtccttggtgtgacatcgggatgctcagtctgaagaggaagcag
aagaagctgaaggagccagtgccgagtggcaagaagaaaagcacgaagctggagacactc
agtgacctggagcgggcgctctccgaaagcaaggacactgcatccgcgatggccacgctg
ggagaggcgcggctgagggagatggaggcgctgcgggccctgcgagcagccaacgagggg
aaggcgctgtcgagcgaggaggacgccgagctcaaggtgtgtctgtgccagaaggagccg
gctgctcccatgatccagtgtgagctctgccggggcttcttccacacgggctgtgtgccg
gtgcccggcgccgcgcccgggccgcgcgtgtggctgtgcccgcagtgccaccgctcgcag
aagccgcctctggagaagatcctgcccctgctggcgtccctgcagcgcatccgcgtccgg
ctgcccgagggggatgccctgcgctacatgatcgagagaactgtgaactggcagcacaga
gcacaacagatgttgtattcagggaatctaaaacgcatccaggacaaagttggctcagga
ttactgtacagcaggtggcaagcctcggcgggccagctgccagagacaaacaaggtgtca
cagacaattggagcaatgtcattctccatgcctcatgactgggataacagaaccatgtat
ttgcattctccattctctacaggacagcactgcatcccacttcatgtcattagcaccgag
ctggatgagctgatgatggaagcccagctgctgcaggtttctttgcctgagatccaggag
ctgtaccaggccctgttcacaaagcagagccctgccctgcagcctgagcagaggtcaccc
agcgcagccacaagtgagaagaatgagtgttgccgagggaagaaggatgggatgagttac
atggagagaaaactgaagcggcgttttgagagagagagcttctgtggtgagaagagagcg
agagtaaaaaagatgagaacacccaaaaagaagaaactgaaactgagtcactcaaaggat
cagtgcagtaacaaactggagagagagcgggagcggctgctggagctgcagcgttccagt
gacagccacttgctgccctcagacacgtcgtcgttctcggagcaggaggactctgaggat
gaggatgccatctgcccagctgtgaactgcctccagcccgagggggatgaggtcgactgg
gtccagtgtgatggcagctgcaaccagtggttccaccaggtgtgtgtgggcatctcccca
gagatggcagagaaggaggattacatctgtgccagctgcggcggcaaggacgcccagtac
cggaagtaa

DBGET integrated database retrieval system