Sturnus vulgaris (common starling): 106851217
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Entry
106851217 CDS
T08833
Symbol
TRIM55
Name
(RefSeq) tripartite motif-containing protein 55 isoform X1
KO
K10654
tripartite motif-containing protein 55
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106851217 (TRIM55)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svg04121
]
106851217 (TRIM55)
Ubiquitin system [BR:
svg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106851217 (TRIM55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Sina_RING
TFA2_Winged_2
Fry_C
DUF4871
DUF1664
Cbl_N
Motif
Other DBs
NCBI-GeneID:
106851217
NCBI-ProteinID:
XP_014728483
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MPQQKLGMSTSLSYKTFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASD
IFQASNPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQEST
RPERKCDQPMCEEHEDERINIYCLNCEMPTCSLCKIFGAHKDCQVAPLTNVYQQQKSELS
DGIAVLVGSNDRMQGIVTQLEETCKSVEECCRRQKEQLCEKFDYLYSVLEERKNEMTQII
TRTQEEKLEHVRSLIKKYADHLEAVSKLVESGIQFMEEPEMAVFLQNAKTLLQKITEASK
GFQMEKIEDGYENMNQFTVNLSREEKIIREIDFDREEEEEEEEEETEDGEGLGEVHTESS
GEEEEEEEVEEEGAERAPQPPQQDPEAQSAGGEPLAEPTPAPVLAASAGQDVVVTPSGSQ
QTPESDTQVPATAETTDPLFYPSWYKSQSRQASSPSPVSGLGKVGTPVSLETSAKKAEAP
TEAATIEESAPGSGKESNATAATSKPGSEPHPQGQVEEAPVSSERGDEPARHVFSFSWLN
SLNE
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcaaaagctagggatgagcacctccctgagctacaagaccttctccaaagag
cagcaaactatggataacctggagaaacagctgatctgccccatctgtttggagatgttc
accaagccagtggtcatcctgccctgccagcacaacctctgtcggaagtgtgccagtgac
atcttccaggcctccaacccctacctgccgaccaggggaggcacaactgtggcgtcgggc
ggccgcttccgctgtccctcctgcaggcacgaggtggtcctggaccggcacggcgtctat
gggctgcagaggaacctgctggtggagaacatcatcgacatctacaagcaggagtccaca
agacctgaaaggaagtgtgaccagccaatgtgtgaagagcacgaagatgagagaattaat
atttattgcttgaactgtgaaatgcccacctgctccctgtgtaaaatctttggtgcccac
aaagactgtcaggttgctcctctcacaaatgtttaccagcaacagaagtctgagctgagt
gatggcattgcagtcctggtggggagcaatgacagaatgcaagggattgtcacgcagctg
gaggagacctgcaagtcggttgaggaatgctgcagacgacagaaagagcagttgtgtgaa
aaatttgattatctctattctgtactggaagaaagaaaaaatgagatgacacaaataatc
actagaacccaagaggagaaactggaacacgtccgctccctgataaagaagtatgcggat
cacttggaagctgtgtcaaaactggttgaatcaggaatccagttcatggaagaaccagaa
atggccgtgtttttgcagaatgccaaaacattgctacaaaaaattactgaagcttctaaa
ggatttcaaatggaaaaaatagaggatgggtatgaaaatatgaaccaattcacagtgaac
ctcagtagagaagaaaaaataatacgagaaattgattttgacagagaggaagaggaagaa
gaagaagaggaggagacagaggatggcgaaggcctgggggaagtccacacagagtcatca
ggagaggaagaagaggaggaagaggtagaagaggaaggggcagagagagcaccacagcca
cctcagcaggatcctgaagcacagagtgcagggggagagcccctggctgagcccactcca
gcgccagtgctggctgcctcagctggtcaggatgttgttgtgacaccaagtggttctcaa
cagactcctgagtctgacactcaagtgccggccacagcagaaaccaccgaccccttgttt
taccctagctggtataaatcacagtcacggcaagcaagcagtccaagcccggtgagtggg
ctggggaaagtagggactcctgtttctctggaaacaagtgcaaagaaggcagaagccccg
acagaagcagcaacaatcgaggagagtgcaccagggagtggtaaggaaagtaatgccact
gcagcgacgtccaagcctggttctgaaccacaccctcaaggacaagtggaggaagctccc
gtgagcagtgagaggggtgacgagccggctcgtcatgtcttctccttctcctggttgaac
tcactgaatgaatga
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