Sturnus vulgaris (common starling): 106851887
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Entry
106851887 CDS
T08833
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106851887 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svg03019
]
106851887 (HBS1L)
Messenger RNA biogenesis [BR:
svg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106851887 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GIP1_N
Motif
Other DBs
NCBI-GeneID:
106851887
NCBI-ProteinID:
XP_014729669
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MSRHRNVRGYNYDEDFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPATFAEPLEEEYG
CEGTDPAADCFTSTHQLTEVDRARLNSCLDQMREVLAESVPEQAMVQAVLDTEFDVQKAL
DLVLSQGSKQNVKTKNKDAVILAKTTKGKTRDSQSARMESEIVPKITKMTVSGKKQSMGF
EVPCAIAEENGHTNTPQKGLLPEDASVASGVLEAASKSILSPQVVHVSEEQNMVPTPAKK
SSKAKPQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQ
ESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETPTKVITLMDAPGHKDFIPNMIT
GAAQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQER
FQEITSKLGQFLKQAGFKESDVAYIPTSGLGGENLVTRGQSSDLTQWYKGNCLLEQIDSF
KPPQRSVDKPFRLCVADVFKDQGSGFCVTGKIEAGYIQVGERLLAMPPNETCTAKGITLH
DEPVDWAAAGDHVSLTLTGMDIIKINVGCVFCDPKEPIKVCTRFRARVLIFNIEVPITKG
FPVLLHYQTVSEPATITRLLSVLHKSTGEVTKKKPKFLAKGQNALIELQTQRPVALELYK
DFKELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcacaggaacgtccgaggatataactacgacgaagactttgaagatgatgat
gtgtatggccaatcagtagaagatgattattgcatttctccttcaacagcagcccaattt
atttactccagacgagacaaaccagccacatttgctgagccattagaagaagaatatggc
tgtgaaggtaccgatcctgctgctgattgttttacatccactcatcagttgactgaagtt
gatagagcccgtcttaattcatgccttgatcaaatgagagaagttttggcagagtccgta
ccagaacaagcaatggtgcaggcagtattggatactgaatttgatgtacaaaaggctttg
gatcttgtgctttcacaaggcagtaagcaaaatgtgaagaccaagaataaggatgctgtg
attttagcaaagactacaaaaggaaaaacaagggattcccagtcagccagaatggaatct
gaaattgtgccaaaaattaccaaaatgacagtgtctggaaagaaacaatctatgggattt
gaagttccatgtgcaattgctgaggaaaatggccacaccaatacacctcagaaaggactg
ttacctgaagatgccagtgtagcttctggggtacttgaggctgcctcaaaatctattctt
tcaccccaagtagtgcatgtttcagaagagcagaatatggtgcctactccagcaaaaaag
tcaagcaaggcaaaaccacaaatagatgtgaaagcagagttggagaagagacaaggagga
aagcaactgctgaatttggtggtaataggacatgttgatgcaggcaaaagtactttaatg
ggtcatttgctttaccttttgggaaatgtgaataaaagaactatgcacaaatatgaacag
gaatctaaaaaggctggtaaagcttcctttgcctatgcatgggtcttggatgaaactggt
gaagaaagagaaaggggagtgaccatggatgtgggtatgaccaaattcgagacaccaact
aaagtaattacactgatggatgctccaggccacaaagacttcattccaaatatgatcaca
ggagctgcgcaggctgatgtggcaattttggttgtggatgccagcagaggagagtttgag
gcagggtttgagactggtggacaaacacgagaacatggattattagtgcgctctcttgga
gtgacacagttggctgttgcagtcaataaaatggatcaggtcaattggcaacaggaaaga
tttcaggaaattacaagtaagctcggccaatttcttaagcaagctggctttaaggaatca
gatgtggcttatatcccaacaagtggccttggtggtgaaaatctagtcacaaggggtcag
tcaagtgacctcacacaatggtataaaggaaactgtttgttagagcaaattgattctttc
aagccaccacagagatcagtggataaaccatttagactgtgtgttgctgatgtttttaaa
gatcaaggttcaggattttgtgtgactggtaaaatagaagcaggctatattcaggttgga
gaacgacttctggcaatgcctcccaatgaaacttgcactgcaaaaggaatcacactgcac
gatgaaccagttgattgggctgcagcaggagatcacgttagtctcactttgaccggcatg
gatatcatcaaaatcaatgtgggctgtgtattttgtgatcccaaggagcccattaaagtt
tgcactcggttcagagctcgggttctcatcttcaatattgaggttccaatcactaaagga
tttcctgtgcttttacactatcaaacagtaagtgaacctgctactattacaagactgttg
agtgtcctgcacaaaagcactggtgaagtgacaaagaaaaaacctaagttcttggctaaa
ggccagaatgctctgatagagctacagactcaaagacctgttgctttggagttgtacaaa
gattttaaagagctggggaggtttatgttacgctacagtggttccactattgctgcagga
gttgttacagagattaaagaatga
DBGET
integrated database retrieval system
