Sturnus vulgaris (common starling): 106852016
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Entry
106852016 CDS
T08833
Symbol
PKD1L2
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
svg
Sturnus vulgaris (common starling)
Brite
KEGG Orthology (KO) [BR:
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]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
svg04040
]
106852016 (PKD1L2)
04091 Lectins [BR:
svg04091
]
106852016 (PKD1L2)
Ion channels [BR:
svg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106852016 (PKD1L2)
Lectins [BR:
svg04091
]
C-Type lectins
Others
106852016 (PKD1L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
SUEL_Lectin
Lectin_C
Ion_trans
REJ
GPS
PKD
AGA2
Motif
Other DBs
NCBI-GeneID:
106852016
NCBI-ProteinID:
XP_014729896
LinkDB
All DBs
Position
Unknown
AA seq
2537 aa
AA seq
DB search
MTSQAFEEGSKKSGALESKTSATHGTELRMWLGITVLMSLAVCMAVEEATDEEIPCSKYQ
QAFNHSCYEFVRLQQTFTSAQSWCERGGGHLVFIQNEDTQEFLQKHIAEDQEWWIGLISN
SLLNETADGSITWLDTSNISYSNWYKDQPSPFSSTCGYILKNAKYQWGVTENCSQEFDFI
CEFESGQSIACDNYNATVQCGSGEVIQIEESFYGRKTPHYCVSETPLQLETDEGCSWISV
KDEVAGQCHGLQACQVAADGTFFGDPCPALGSYLSVQYHCKEGLQLVMTDTCFVFENITL
TLNWLLSPYSGNLSCTISTGDGHTIDPYYPLTLVSNLTYTYSSPGEFTVFVECTTSEWHV
MAQRQVTVQDGVDQLSITGCFSRCETGNSSHCRTLYGEVLWIQVQLTGGNGVTYSVLADN
MTLTESSVKEGLVPHNLTLNSASQELIGPGIHQLEIRASRNTKASEISERIAVHLIEPVS
GIQAAVASHTLQLGEDLEVNVSVSHGAPEKLMFEVTGANQTHCHKADGPRGEPRMYSVPV
PSEGTFLVKVVAMNAFSNMSLDLGFITVLANSSHKKDSAKEEGSYKTNTQKKNDHRIYIK
PSRHVDPFTTVTLGWPDNSSNSSFLWTCGACWPAWNECVKQQIILINQSEVQIPPSCLPP
PKSAVTVRITVRNHGSEEGQDEQCLYVTAKQQLQLEIRCEANCKPVNVSDEVVLSVSGQE
DSQAIHYNWYLDNTFQKKSTTLPPACGLTGFQQNSLNLLQSNTSVLRMTSSFLQTQGEAF
QIKLFSSHGLLRGRQPRGSVGDAGARSWLSPLPPLAARTPRGYGEGSFQVSAVAPPEAPV
CALSPGHGSVLTAFRVSCSAPGSQGSGQPRPSRQLTYCFYVTPDSLLDCSPDPELFPVYL
PLGEKENDFILYVTIIVSNNFGDTAQTNASVKVGPADMMDGNLTLQAVISEKANTILKDG
NNSMSLFQLYKSVTSVLNQQIQEESFNMSLQKTTRKELRGLMLTTLSVVNITSMQTALKM
SEVLKEITYRSEELSVSAQVEASNTLKHVSASLLAVNTEHSRDGEELKEAANYLFNAVSN
VLKASVEIRGGNTSVPEAEQSSVSHQLLSTVENLQSALLFGKAPGDEPTVLTSPSATMYM
HRLQIENMDSTSINISNSSSASFTLPPASSLSVSGVDGETVDIRMVSFAMNPFFSSDNSF
DISGTVGGLSLTDLDGLIIPVSNLEENIEIILPRLSAAEEDKILLKLGNYSTFQVNVTSE
NTSIVIHLESEHDIPLILYLGYGYHPNETNYDMKNHLFYKKTSGGEINSWVLSPEELIFG
VGAYYFMVLQDMGTDSTVYNGLTINATCFASRCVFWDEHQGGWNSYGCHVGPKTNPSSTQ
CLCNHLTFFGSSFFVIPNAIDVSKTAQLFGTFVDNPVVVTTVGCIFLIYVLVLIWARRKD
IQDDAKVKITVLEDNDPFAQYRYLVTVFTGHRRGAATTSKVTLTLYGLDGESEPHHLNDP
DTPVFERGGVDVFLLCTFFPLGELQSIRLWHDNSGDSPSWYVNRVLVHDLAWDQKWYFLC
NSWLAIDIGECILDKVFPVATEQDLKQFSNLFYMKTSKGFQDGHIWYSVFSRSPRSSFTR
AQRVSCCFSLLLCTMLTSIMFWGVPKDPAEQKMDLGKIEFTWQEVMIGFESSLLMFPINL
LIVQIFRNIRPRPAQQGREKKPGKNGRVSPSLPPTPGPTQAASLTPEAVAKDIRRIANSL
FKALKTPSLISVPDLEKSTNINTLLSLVEDIIFQQNRAEQGFYDESKNDDPITVTLGAMD
IQEKTRSPTPENRICGQLKYSDYYRCLYMQLHHVEMELELLGAHKFQMPQSYTQAVCQVQ
HMKNLLENQICSSAWSHTPNLSSDDKKSSSPRGLPWWFVFIAWFLVAATSGVSGFFTMLY
GLHYGKENSIKWLISMVISFLESLFITQPLKVLGFAAFFALVLKKVEHEDEENTAIDGPL
SGSLLSPTGDSHPLFGVRRDSRSNIYRPPPAADVEKMKISCMKEQKAFALIREILAYLGF
LWMLLLVAYGQRDPNSYYLNKHIKHSFTDGFQDVYSYQDFFTWANTTLLKNLYGSYKGFI
TDGNSKLVGSARIRQVRVKGDTCPISPRLQHVVEECHAPYSLQTEDTSVYGEHWNTSVFD
NSSDLSSAWRYQSQSKLRGYPSWGKFAIYSGGGYVIHLGTDPKNASRILQYLFNNVWLDI
FTRAVFVEFTVYNANVNLFCIISLMFESNALGAFFTSAELQSVRLYPYTNSLHIFVVAAE
VIYFLFIVYYMTVQGKLLKSLRWRYFHSKWNLLEMAIILISWSALSVFVKRTVLGTRDIS
YYQEHKEDSISFSETARADAVLGYLIAFLVLLSTVKLWHLLRLNPKLNMITSTLRRAWGD
ISGFITVIAIMFLAYSIAANLIFGWKLYSYKTLFDSAETMVSLQLGIFNYEEVLDYNPIL
GSFLIGSCIIFMTFVVLNLFVSVILVAFSEEQKHYQASEEEEIVDLMLMKLFSFFGIKCK
KEEKPVTGEQLEQPDSE
NT seq
7614 nt
NT seq
+upstream
nt +downstream
nt
atgacatctcaagcttttgaagaaggcagcaaaaagagtggtgccctggaaagcaagacg
agtgcaacacacggcactgagctgagaatgtggctggggatcacagttctgatgtctctt
gctgtgtgcatggctgtggaggaagcaactgatgaagaaataccttgttcaaagtaccag
caagctttcaaccattcatgctacgagtttgttagactccagcaaaccttcacaagtgcc
cagagctggtgtgagagaggaggagggcatcttgtctttattcaaaatgaagacactcaa
gagttcttgcaaaaacatattgctgaggatcaggaatggtggataggactgatctcaaac
tccttgctgaatgaaactgctgatggatcaataacttggctggacacttcaaatataagc
tacagtaactggtacaaggatcagccatctcccttctcatccacatgtgggtacatcctg
aagaatgccaagtatcagtggggtgtgactgaaaattgcagccaagaatttgacttcatt
tgtgagttcgaatctggccagagcattgcttgtgataattacaatgccactgtacagtgt
ggatcaggagaagttattcaaattgaagagagcttctacgggaggaagacccctcactac
tgtgtgtcagagactcctctccagctggaaacagatgaaggctgcagctggatcagtgtc
aaggatgaagtagcaggccagtgtcacggtctgcaggcttgccaggtggcagcagatggc
actttctttggagatccttgtccagctttgggaagctatttgtctgttcaatatcactgc
aaggaaggtctgcagctggttatgacagacacatgttttgtgtttgaaaatatcacgctc
actttgaactggctgctctcaccatactctgggaatctttcctgtaccattagcactgga
gatggtcacactattgatccttactaccctctaacactggtcagcaacctcacatacacg
tactcctctcctggggagttcactgtttttgtggagtgcaccaccagtgagtggcatgtg
atggcccagaggcaggtgaccgttcaggatggggtggatcagctcagcattactgggtgc
ttcagccggtgtgaaacagggaacagctcccactgccgtacgctctatggggaggtgttg
tggatccaagttcagctcactggaggcaatggagtaacctacagcgtgttagcagataac
atgacactgactgaatccagtgtaaaggaaggtcttgttccccataacctgacactcaac
agtgcctctcaggagctgataggcccagggatacatcagctggaaatccgagcatccagg
aacacgaaggcttcggagatctccgagagaattgctgtccatttaattgagccagtatct
ggaattcaggctgctgtagcttcccacactctgcagctgggggaggatttggaggtgaat
gtctctgtgtcccacggtgccccagagaagctgatgtttgaggtgactggagccaaccaa
acccactgccacaaagcagatggccctcgcggggagccgcggatgtacagcgttcctgtg
ccctcggaagggacttttctagtgaaagtcgtggccatgaatgccttctcaaacatgagt
ctggatcttggattcatcactgtgttggcaaacagttcccataaaaaagattctgctaag
gaagaaggcagctacaaaacaaatactcaaaagaaaaatgatcacagaatatatattaaa
ccgagtcgccatgtggatcctttcacaactgttacacttggctggccagacaacagcagt
aattccagttttctctggacctgtggagcttgctggcctgcctggaatgaatgtgtgaag
caacagataatcctaatcaaccaaagtgaggtgcaaatcccaccttcctgccttcctcct
cccaaatcagcagtgactgtcaggattaccgtccgaaaccatggcagtgaagaggggcag
gatgagcaatgtctctatgtgactgcaaaacaacaactgcaactggaaatcaggtgtgag
gcaaactgcaagccagtgaatgttagtgatgaagttgttttgagtgtctctggacaggag
gactcccaggccatacattataactggtatttagataacacattccaaaagaagtccaca
accctccctccggcctgtggcctgactggtttccagcagaactctttgaatttgcttcaa
agcaacacgtctgtgttaagaatgaccagctccttcttgcagacacagggagaagctttt
cagattaaactcttttcctctcacggtttattgaggggcagacagccccgtggctcggtg
ggcgatgccggggcacggtcgtggctgagcccgctccctccgctcgcagccaggactccg
cggggttacggggagggctcgttccaggtgagcgccgtggccccgcccgaagccccggtc
tgtgccctgagtcccgggcacggctcggtgctcaccgcattccgagtctcctgcagcgct
cccggctcccagggctcgggccagccccgtccgagcaggcagctcacatattgcttctat
gtgacaccagattctctcctggattgtagcccagatcctgaactcttcccagtttatctt
ccacttggagaaaaggaaaatgattttattttatatgtgacaattattgttagcaacaat
tttggtgatacagctcaaacaaatgcttcagtgaaggttggacctgcagatatgatggat
gggaacctgaccctgcaggctgtgatatctgagaaggcaaacaccatcctaaaagatggc
aacaacagcatgagtcttttccagctctacaagtcagtgacatctgtccttaatcagcag
atccaagaggaaagttttaacatgtctttacagaaaactacacgaaaagagctccgaggg
ctgatgctgacaactctctctgttgttaacataacatcaatgcagactgctctgaagatg
tcagaggtactgaaagaaatcacttataggagtgaagagctgtctgtctcagcacaggtg
gaagccagcaacactctgaaacatgtcagtgcctccttgcttgctgtaaacacagagcac
agcagagatggtgaggagttaaaggaagcagccaactatctgtttaatgcagtgagcaat
gttcttaaagcttctgtagaaatcagaggtgggaacacttcagtgccagaggcagaacag
agttcagtgtcacaccagctcctgagtacagttgaaaatctccagagtgcccttctgttt
gggaaggcaccgggtgatgagccaacagtcctcacctctccctctgctacaatgtacatg
cacagattacaaatagaaaacatggatagcacatccattaacatctccaattccagctct
gccagctttactctcccacctgcttcttctctcagtgtttcaggagttgatggtgaaaca
gtggatataaggatggtgagctttgccatgaatccctttttctccagtgacaacagtttt
gacatcagtggaacagtgggaggtctaagtctaactgatctggatggtttgatcatacca
gtcagcaacctcgaagagaacattgagatcatcttaccacggctttcagcagctgaggaa
gataagattctgttgaagctgggcaattacagcacttttcaagtcaatgttacctcagaa
aacacatctatagtgatccacctggaatctgaacatgacatcccactaatactttacttg
gggtatggttatcatccaaatgaaaccaactatgacatgaaaaatcatctgttctataag
aaaacttctggaggtgagataaacagctgggttctcagcccagaagaactcatttttgga
gtgggagcctactatttcatggttttacaagatatgggaacggattcaacagtctacaat
gggctaaccataaatgccacttgctttgcatcccgctgtgtattttgggatgagcaccag
ggaggctggaacagctatggatgtcatgtaggaccaaaaacaaatcctagcagcacacag
tgcctctgcaaccatctgaccttctttgggagctccttctttgtcatacccaatgccata
gatgtcagcaaaacagcacagctgtttggtacattcgtggacaatcctgtggtggtgaca
actgtaggatgcatctttctgatatatgtgcttgtacttatttgggctcgaaggaaagac
atccaggatgatgccaaagtgaaaatcacagtcctggaagacaatgacccctttgcccag
tatcgttaccttgtgacagttttcacaggacaccgccgtggcgcagccacaacctccaag
gtgactctcaccctctatggactggatggagagagtgagccccaccatctaaatgatcct
gatacaccagtctttgaacgtggaggagtggatgttttcctcctctgtaccttcttccct
cttggggaactgcagagtattagattgtggcatgataattcaggggatagtccatcctgg
tatgtgaatcgagtattagtccatgatctggcatgggatcagaaatggtacttcctctgt
aactcttggctagccattgatattggagaatgcatcctagataaagtgttcccagtagca
acagaacaggacctgaagcagttcagcaatctgttttacatgaagacttccaagggtttc
caggatggacacatctggtactcagttttcagccgctccccacgaagctccttcacgcga
gcccagcgtgtgtcctgttgcttctcactgctcctctgcaccatgctgaccagcatcatg
ttctggggtgtgccaaaggatcctgctgagcagaaaatggatttgggtaagattgagttc
acatggcaggaagtgatgattggctttgagagctccctcctcatgttccccatcaacctg
ctcattgtccagatcttcaggaacatacgaccccggccagcccagcagggcagagagaag
aagccaggaaagaatggccgagtatccccaagcctgcctcccaccccagggcccacccag
gctgcctctctcactccagaggctgtggcaaaggacataagaagaattgccaactcactt
tttaaagccctgaagactccatcgctcatctcagtgccagaccttgaaaaatcaactaat
atcaacacactcctgtcattggttgaggacatcatctttcagcagaacagagctgagcaa
gggttttatgatgagagcaagaatgatgaccctataactgtcacattgggtgctatggat
atccaagaaaaaacaagaagtccaactccagagaacagaatttgtggccagctgaaatac
agtgattactatcgctgcttgtacatgcaactccaccatgtggagatggaactggaatta
ctgggggcccataaatttcagatgcctcagagttatacacaagctgtttgtcaggttcag
catatgaagaacctcctagagaaccaaatctgctcatcagcgtggtcccacactcccaac
ttgtccagtgatgacaagaaaagttcttctcccagagggctgccctggtggtttgtgttc
attgcttggttccttgtggcagccaccagtggtgtgtctgggtttttcaccatgctctat
ggactccattatggcaaagagaactccatcaagtggctcatctccatggtcatctccttc
ttggaaagtcttttcatcacacagcctttaaaggtgctgggatttgctgctttttttgct
ctggttctgaagaaggtggaacatgaggatgaagaaaacacagctattgatggaccttta
tctggttcactgctctcccccacaggtgattcacaccctctctttggggtcagaagggac
agtagaagcaatatttaccggccacctcctgctgctgatgtggagaaaatgaaaatcagc
tgcatgaaggagcagaaagcatttgccctcatcagagaaatcctggcctatctgggattt
ttatggatgctgttgctggttgcctatgggcagagagatcccaattcctactatttaaac
aaacacattaagcacagctttacagatggattccaggatgtctacagttaccaggatttt
ttcacctgggcgaacactactttactcaaaaatctttatggatcatataaaggattcatt
acagatggcaattccaagctggtgggtagtgctcgaattcgccaagtaagagtgaaagga
gacacctgccctatttctcccagactccagcacgtagttgaggaatgccatgctccatac
tccctacaaacagaggatacatcagtttatggggagcactggaatacctcagtctttgat
aactcctctgacttgagctcagcatggcggtatcagagtcagtccaaactcagaggatac
ccaagctggggtaaatttgccatctacagtggagggggatatgtgattcacctgggaaca
gaccctaaaaatgcctccagaattctccagtaccttttcaacaacgtctggcttgacatc
ttcaccagagcagtgtttgttgaatttacagtctacaatgccaacgtgaacctcttctgc
attataagcctgatgtttgaaagcaatgctttaggtgctttcttcacaagtgcagagctg
caaagtgtccggctctacccctacaccaacagcctccacatctttgtggttgcagcagaa
gtcatttatttcctcttcattgtgtactacatgacagtacagggaaagctcctgaagagt
ctgagatggagatacttccatagcaagtggaatctcctggagatggccattatattgatt
agctggagtgctctgtcagtgtttgtgaaacggacagtccttgggacccgggacatcagc
tactaccaggaacacaaggaggactccataagcttcagtgaaacagcgagagctgatgca
gttcttggctacctgattgcattcctggtgcttctctccacagtgaaactgtggcatctg
ctgaggctcaaccctaaactgaacatgatcacttcaacactaaggagggcatggggtgat
atctcaggattcatcactgttattgcaatcatgttccttgcttactccattgctgcaaac
ctgatatttggctggaagctctactcttacaaaactctctttgattcggcagagaccatg
gtcagtcttcagctgggaatcttcaactatgaggaggtcttggactacaatccaatttta
ggctccttcttaattggatcctgcatcatttttatgacatttgtggtactgaatctgttc
gtttcagtgattctggttgcttttagtgaggagcagaagcattaccaggcttcagaagaa
gaggagattgttgatctaatgctaatgaaactcttcagtttcttcgggataaaatgcaag
aaggaagagaagccggtcactggcgaacaactggaacaacctgacagcgagtga
DBGET
integrated database retrieval system
