Sturnus vulgaris (common starling): 106852537
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Entry
106852537 CDS
T08833
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
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]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106852537 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svg03021
]
106852537 (TAF5L)
03036 Chromosome and associated proteins [BR:
svg03036
]
106852537 (TAF5L)
Transcription machinery [BR:
svg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106852537 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
106852537 (TAF5L)
Chromosome and associated proteins [BR:
svg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
106852537 (TAF5L)
STAGA complex
106852537 (TAF5L)
TFTC complex
106852537 (TAF5L)
SAGA complex
106852537 (TAF5L)
SLIK complex
106852537 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
TFIID_NTD2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WD40_RFWD3
PEP5_VPS11_N
PROPPIN
WD_LRWD1
Ge1_WD40
eIF2A
Nbas_N
Motif
Other DBs
NCBI-GeneID:
106852537
NCBI-ProteinID:
XP_014730712
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MKTRRCLLSISINAATVQVDLRLLCKSLITSFFSFEVMKRVRTEQIQMAVSCYLKRRQYV
DSEGPLKQGLRLCQTAEEMAANLTVQSESGCANVVSAAPCLAEPQQYEVQFGRLRNFLTD
SDSQHSHEVMPLLYPLFVYLHLNMVQNGLKSTVDSFYSRFHGMFLQNASQKDIIEQLQTT
MTIQDILSNLKLRAFLDNKYVIRLQEDSYNYLLRYLQSDNNNALCKVLTLHIHLDVQPAK
RTDYQLYAGGSSSRNESNGLEPSDVPASILQNEAALDLLQDSIKRVKDGPPSLTTICFYA
FYNTEQLLNTAEISPNSKLLAAGFDNSCVKLWSLRSRKLKSEPHLVDVSRIRLACDILDE
EEEEDDNAGTEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLGSFTNTVLYQGH
AYPVWDLDISPCSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCIKFHPNSNYLAT
GSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLY
KELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYCNAPADGSSSELVGVYTGQM
NNVLSVQFMACNLLLVTGIAQENQEH
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacacggagatgtttgctttctatcagtattaatgcagctacagtccaagttgat
ctaaggttactctgtaagagtctcatcacctctttcttttcttttgaggtcatgaaacgc
gtacgcacagaacagattcagatggcagtgtcctgctacctcaaacgccgtcagtatgtg
gactcagaaggtcccctgaaacaagggctgaggctgtgtcagactgctgaagagatggca
gctaatctcacagtccaatctgagtctggttgtgccaacgtcgtgtctgcagctccctgc
ctggcggagccacagcaatatgaagtacagtttggacgattacgcaattttctgacagat
tcagattctcagcacagccatgaagtgatgcctcttctatatcccctcttcgtctacctc
catctgaacatggtccagaatggcctaaaaagcacagtggacagtttttacagccgcttc
catggcatgttcttgcagaatgccagccagaaggatatcattgaacagttgcagactacc
atgactattcaagatatcctgtccaacttgaagcttcgggcttttctggacaacaaatac
gtcatccgccttcaagaggacagctacaactaccttcttcgctacctccaaagtgacaac
aacaacgccctgtgcaaagtcctgaccttgcacattcacctggatgtgcagcctgccaag
aggactgactaccagctctatgctggtgggagctcctcacgcaacgagagcaacggcctg
gaacccagcgacgtgccagcttccattctgcagaatgaggcagcgctggatttactgcag
gacagcattaaacgtgtcaaggacgggcccccttccttaaccaccatctgtttctatgcc
ttctataacacggagcagttgctgaacactgcagagatttcaccaaatagcaagctgctt
gctgctggattcgataattcctgtgtgaagctgtggagcctgcgctccaggaagttgaaa
tctgagccccaccttgttgatgtgtcccgcatccgtttggcttgtgatatcctggatgag
gaggaggaagaggatgacaatgcaggcacagaaatgaagatcctgagaggacactgtgga
cctgtgtatagcacgaggttcctttcagacagttcaggactcttgtcttgttctgaggac
atgtccatcagatactgggacctcggaagttttacaaacactgtgttgtaccaaggacat
gcctatcctgtctgggatttggatattagcccctgcagcctgtactttgccagcggctcc
cacgatcgcactgcaaggctctggtcgtttgatcggacgtacccgctgcgaatatacgcg
ggccacttggcggacgtggactgcatcaagttccaccccaattccaactacttagcgacg
ggctccacggacaaaaccgtgcgcctgtggagcactcagcagggcaactcggtgcggctt
ttcaccgggcaccggggccctgtgctggcgctggcattttcccccaatggtaagtacctg
gcatcggcaggtgaagaccagcggctgaagctgtgggacttggcatcaggaactctttac
aaagaactgagagggcacacagacaacataaccagccttacttttagccctgacagtagt
ttgattgcttcagcgtcgatggacaattcggttcgggtctgggacattcggaacacttac
tgcaacgcccctgctgatgggtcttccagtgaactggttggtgtatataccggacagatg
aataatgtactgagcgtacagtttatggcctgtaatcttcttctagtgactggaattgca
caagaaaatcaggaacattaa
DBGET
integrated database retrieval system
