Sturnus vulgaris (common starling): 106852538
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Entry
106852538 CDS
T08833
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg04010
MAPK signaling pathway
svg04210
Apoptosis
svg04218
Cellular senescence
svg04620
Toll-like receptor signaling pathway
svg04621
NOD-like receptor signaling pathway
svg04622
RIG-I-like receptor signaling pathway
svg04623
Cytosolic DNA-sensing pathway
svg04625
C-type lectin receptor signaling pathway
svg04920
Adipocytokine signaling pathway
svg05132
Salmonella infection
svg05164
Influenza A
svg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106852538 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
106852538 (NFKB1)
04218 Cellular senescence
106852538 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
106852538 (NFKB1)
04621 NOD-like receptor signaling pathway
106852538 (NFKB1)
04622 RIG-I-like receptor signaling pathway
106852538 (NFKB1)
04623 Cytosolic DNA-sensing pathway
106852538 (NFKB1)
04625 C-type lectin receptor signaling pathway
106852538 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
106852538 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
106852538 (NFKB1)
05168 Herpes simplex virus 1 infection
106852538 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
106852538 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svg03000
]
106852538 (NFKB1)
Transcription factors [BR:
svg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
106852538 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
106852538
NCBI-ProteinID:
XP_014730708
LinkDB
All DBs
Position
Unknown
AA seq
985 aa
AA seq
DB search
MAAEDSYIMGVSDPQMFAVDQFMGMNALFNSTNYITSDLPLRTADGPYLQIIEQPKQRGF
RFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKYVHLHAHSLVG
KFCEDGVCTVTAGPKDMVVGFANLGILHVTKKKVFETLEARMIDACKKGYNPGLLVHPEL
SYLQAEGCGDRQLTEREREIIRQAAIQQTKEMDLSVVRLMFTAFLPDSNGSFTRKLDPII
SDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGGMWE
GFGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKD
KEEVQRKRQKLMPNFSDGYGGGSGTGGGGMYGGAGGSAGSGFSFPSYGYSAFGGMHFHPG
TTKSNAGMKHEGLSNCTAEQDRKSCDKQSDKWDMKCDVKEETVERTECRTSCSAVNEKKE
DSVFSCKTEVSEADCRWQDALFLEKAMQLARRHCNALFDYAVTGDVKMLLAAQRHLTAVQ
DDNGDNVLHLAIIHLHTELVKNLLDVMPDLNYNDIINMRNDLYQTPLHLAVITKQAKVVE
DLLKAGADVSLLDRHGNSVLHLAATEGDDKILSLLLRHEKVSPMVNLPNGEGLSAIHMVV
MANSMSCLKHLIAAGVNINAQEQKSGRTALHLAVEQENIPLAGCLLLEGDADVDSTTYDG
TTPLHIAAGRGSTKLAAVLKAAGANPHIENFEPLFDLDDVKDGEDDDEGIVPGTTPLDMA
ANSEVYDILNGKPYESAEVLEDLLTQGHLRELNENSKMQLYKLLELPDPTKNWSSLAQKL
GLGILNNAFRLSPSPSKTLLDNYEVSGGTVQELITALRQMDHTEAIEIIQEALSISRRPS
PLEDSTAKALPSSSPLTFANEETGELYNSRFQDTESTCDSGVETSFRKLSFTYSDSLNSK
SSLTLGKMALGYGHESSGQSNYIAD
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaagattcctatatcatgggagtatctgatccccagatgtttgcagtggat
cagttcatgggaatgaatgctttatttaacagtacaaattacatcacttcagacttgcca
ctacgaacagcagatggaccatatcttcagatcatagaacagccaaaacagaggggattt
cgtttccgatatgtatgtgaagggccttcacacggtggacttcctggtgcttctagtgaa
aagaacaagaaatcgtaccctcaggtcaaaatctgcaattatgttggacctgcaaaagta
attgtccagttagtaactaatgggaaatacgtccacttacatgctcacagcttggtgggt
aaattctgcgaagacggagtgtgcacggttactgcaggacccaaggacatggttgtgggg
tttgcaaatcttggaatacttcatgtcacaaagaagaaggtgtttgaaactctggaagca
cgcatgatagatgcttgcaagaagggatacaacccaggactcctggtgcatccagaactc
agctatctacaggcagaaggatgcggagacaggcagctaactgaacgggagagagaaatc
atccgccaggcagccatccagcagaccaaggagatggatctcagcgtggtgcggctcatg
ttcacagcctttcttcccgacagcaacggcagcttcacacggaaacttgaccccattata
tcagatgcaatatatgacagcaaagctcccaatgcctccaacctaaaaattgtaagaatg
gacagaacagcagggtgtgtgacaggaggggaagagatttacctgctctgcgacaaggtt
cagaaagatgatattcaaatacgtttctatgaagaggatgagaatggtggtatgtgggaa
ggctttggagatttttctcctacagatgtacatagacagtttgctattgtgttcaaaaca
cctaaataccgagatgtcaatatcacaaagccagcatctgtatttgtacaactgcgtagg
aaatctgatctagaaacgagcgaaccaaagccttttctctactatccggaaatcaaagat
aaagaagaggtgcaaaggaaacgacagaagctcatgccgaatttctccgatggctatggt
ggaggcagtggcactggaggtggtggcatgtatggaggggcaggtggcagtgctggctct
gggttcagttttccttcatatggatactctgcttttggagggatgcatttccatcctggc
acaacaaagtccaatgctggcatgaaacatgaaggtttatcaaattgcacagctgaacaa
gacagaaagagttgtgataaacaaagtgacaaatgggacatgaaatgtgatgtgaaggag
gaaactgtggagaggactgagtgcaggacgtcctgttctgctgttaatgagaaaaaggag
gattccgttttttcctgtaagactgaagtaagcgaagcagattgcaggtggcaggatgct
ctgttcctggagaaggccatgcagcttgccaggcgccactgcaacgctctctttgattat
gctgtaaccggagatgtgaagatgctgctggcagctcagcgccatctcaccgctgtccag
gatgataatggggacaatgtccttcatttagcaattatccaccttcatactgagctggtg
aaaaacctcttggatgtgatgcccgatttgaattacaatgacatcattaacatgagaaat
gacctctatcagacccccctgcacctggcagtaatcacaaagcaggcaaaggtggtggaa
gacttgctgaaggctggagcagatgtcagccttctggatcgccatggcaattctgtctta
catttagctgctactgaaggagatgacaagattttgagtctactcctcaggcatgagaag
gtatctccgatggtcaacctccccaatggtgaaggtctcagtgcaattcacatggtggtg
atggcaaatagcatgtcctgcctcaaacatctgattgctgctggagttaacatcaatgct
caggaacaaaaatctggacgaactgcactgcatttggctgttgaacaagagaacatcccc
ttggcaggctgccttttgcttgaaggtgatgcagatgtggacagcactacatatgatggg
acaactccacttcacatagcagctggaaggggctcaacaaaattggcagcagttctcaaa
gcagcaggtgcaaatcctcacattgagaactttgaaccattgtttgatctggatgatgtg
aaagatggtgaagatgatgatgaagggattgtgcctggaacaacaccactggatatggcg
gccaactctgaggtgtatgacatactaaatggcaaaccctatgagtcagcagaggttttg
gaggacttactcacacaaggacatttgagagagctgaatgagaattccaagatgcagctt
tacaaattattggaattgcctgatccaaccaaaaactggagctccctagcacaaaaactg
ggtcttggcatacttaataatgccttcaggttgagcccttccccatcgaagactctgctg
gataactatgaggtttctggaggtacagttcaggagctgatcacagctttgagacagatg
gatcacacagaagccatagaaataattcaggaagcactatccatctcacgcagaccgtct
ccactggaggacagtacagcaaaagctcttccatcatcatcaccactcacctttgcaaat
gaagagacaggtgagctctataatagcagattccaagacactgaaagtacatgtgacagt
ggtgtggagacctcctttcgcaagctgagcttcacttactcagactctctgaacagcaag
tcctcactaacacttggcaaaatggccctgggctatggacatgaaagttcagggcaaagc
aattacatagctgactag
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