Sturnus vulgaris (common starling): 106853360
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Entry
106853360 CDS
T08833
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106853360 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svg03041
]
106853360 (PRPF8)
Spliceosome [BR:
svg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
106853360 (PRPF8)
Complex C
U5 SnRNP specific factors
106853360 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
106853360
NCBI-ProteinID:
XP_014732025
LinkDB
All DBs
Position
Unknown
AA seq
2335 aa
AA seq
DB search
MAAVFPYRGGCAPVPNPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
VAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgtgttcccgtaccgcggcggctgcgccccggtgcccaacccgctggcgccg
ctgcccgactacatgtccgaggagaagctgcaggagaaagcccgcaaatggcagcagctg
caggccaagcgctatgcggagaagagaaaattcggcttcgtggacgcgcagaaggaggac
atgccccccgagcatgtccgcaaaatcatccgcgaccacggcgacatgaccaataggaag
ttccgtcacgacaagcgcgtctacctgggagctctgaagtacatgccccatgctgtgctg
aagctcctggagaacatgcccatgccctgggagcagatccgagatgttcctgtcctgtac
cacatcactggcgccatctcctttgtcaatgagatcccctgggtcatcgagcctgtctac
attgcccagtggggctccatgtggattatgatgaggcgggagaagagggacaggcgtcac
ttcaagaggatgagattccccccgtttgatgatgaagaacctcctctggattacgctgat
aacatcctggatgtggagcccctggaagccattcagctggagctggatccagaggaggat
gcccctgtgctggactggttctatgaccaccagcctctgaaggacaacaggaagtatgtc
aatggctccacataccagcgctggcagttcaccctccccatgatgtccaccctgtaccgc
ctggccaaccagctgctcactgacctggtggatgacaactacttctacctgtttgacctg
aaagcattcttcacctccaaggcactgaacatggccattcctggaggtcccaagtttgag
ccccttgtcagagacatcaatcttcaggatgaagactggaatgaatttaatgacatcaac
aaaatcatcatcaggcagcccatcaggacagagtacaaaattgctttcccatacctgtac
aacaacctgccacaccatgtccacctcacttggtatcatactccaaacgttgttttcatt
aaaacagaagatcctgacctccctgctttttacttcgatcctctgatcaaccccatttca
cacagacattctgtcaagagccaggagccactgcctgatgacgatgaagagtttgagttg
ccagagtttgtggagcctttcctgaaggatacccctctctacactgataacacagccaat
ggcattgccctgctctgggccccacgacccttcaacttgaggtctggcaggacccggaga
gctcttgacatcccactggtcaagaactggtaccgagagcactgcccagcaggacagcca
gtcaaggtgagagtctcctaccagaagctcctgaaatactatgtcctgaatgcactcaaa
cacagacctcccaaggcccagaagaagaggtacctattccgctccttcaaggctaccaag
tttttccagtcgaccaagctggactgggtggaagttggcctgcaagtgtgtcgccaaggc
tacaacatgctgaacttactgatccacagaaagaacctgaattaccttcacttggattac
aacttcaacctgaagcctgtgaagaccctcaccacaaaggaaagaaaaaaatcccgtttt
gggaatgctttccatctgtgccgagaggtcctgcggctgactaagctggtggtggacagc
cacgtccagtacagactgggaaatgtggatgcatttcagctggcagatgggctgcagtac
atctttgcccacgtgggtcagctcacagggatgtaccggtacaaatacaaactgatgagg
caaattcgaatgtgcaaggacctgaaacatctcatctactacaggtttaacacagggcct
gtgggcaaaggtcctggctgtggtttctgggctccaggctggagagtgtggctgttcttc
atgaggggcatcaccccactgctggaacgctggctggggaatctgctggccaggcagttt
gaaggccgtcactcaaagggcgttgcaaagactgtcacaaagcagcgtgtggagtctcac
tttgacctggagctcagggcagctgtgatgcacgacatcctggacatgatgccagaaggg
atcaagcagaacaaagccagaaccatcctgcagcacctgagtgaggcttggcggtgctgg
aaggccaatattccttggaaggtgccagggctgccaacccctattgagaacatgatcctg
aggtatgtgaaggccaaagctgactggtggacaaacacagctcactacaaccgggagcgg
atccgccggggagccaccgtcgacaaaaccgtctgtaagaagaacctgggcaggctgacc
agactctacctgaaagctgagcaggaacggcagcataattacctgaaggatgggccttac
atcactgcagaagaggctgttgctgtgtacacaaccacagtgcactggctggagagcagg
agattctcccccattccgttccccccactgtcatacaagcatgacaccaagttgctgatc
ttagccctggagaggctgaaggaagcttacagtgtgaaatctcgactgaatcagtcacag
agagaggagctgggcttgattgagcaggcttatgataatccccacgaagctctgtccaga
atcaagcgacatctgttgactcagagagccttcaaagaggtgggaattgagttcatggat
ctctacagccacttggtccctgtttatgatgttgagcccctggagaagatcacagatgct
tatctggatcagtacctgtggtatgaggctgataagcgaagactcttccctccttggatc
aaacctgctgacactgaaccacccccactgctggtgtacaagtggtgccaaggcattaat
aacctgcaggatgtttgggaaacaagtgaaggggaatgtaatgtgatgctggagtctcgg
tttgagaagatgtatgagaagattgacctgaccttgctcaacaggctgctgcgtctcatc
gttgatcacaacattgctgactacatgacagccaagaacaacgtggtgatcaactacaag
gacatgaatcacacaaactcctatgggattattcgtgggctgcagtttgcttccttcatt
gtccagtactatgggcttgtgatggacctgctggtgctgggcctgcaccgggccagtgag
atggctgggcctccccagatgccaaatgacttcctcagcttccaggacattgccacggag
gtggcccatcccattcgcctcttctgcagatacattgacagaattcacatcttcttcagg
tttacagctgatgaggcaagagacctgatccagaggtacctgacagagcacccagacccc
aacaatgagaacatcgtgggctacaacaacaagaagtgctggccccgcgacgctcgcatg
cgcctcatgaagcacgacgtgaaccttggccgtgctgtgttctgggatatcaagaaccgc
ctgccccgctcggtgaccacggtgcagtgggagaacagcttcgtgtccgtgtacagcaag
gacaaccccaacctgctgttcaacatgtgcggcttcgagtgccgcatcctgcccaagtgc
cgcaccagctacgaggagttcacccacaaggacggggtctggaacctgcagaacgaggtc
accaaggagcgcacggctcagtgcttcctgcgtgtggatgatgagtctatgcagaggttt
cacaacagagtgaggcagatcctcatggcctctggctccacaaccttcactaagattgtc
aataaatggaacacagctctgattggcttgatgacttatttccgggaagctgttgtaaat
actcaggagctgcttgatttgttggtgaagtgtgagaataaaatccagactcggatcaag
atcggcctgaattctaaaatgcccagccgttttcctcctgtggtgttctacacccctaaa
gagctgggagggctgggcatgctctccatgggccatgttctcatccctcagtctgacctg
aggtggtccaagcagacagatgttggcatcactcacttccgctcgggaatgagtcatgag
gaggaccagctcatcccaaatctgtatcgttacatccagccctgggagagtgaattcatt
gactctcagagggtgtgggcagagtatgccctgaaacgacaggaggctatagcccagaac
aggcgtctgacactggaggatctggaggactcctgggacagaggaattcctcggattaac
acccttttccagaaggaccggcatactctggcttatgataaagggtggagagtcaggact
gacttcaaacagtatcaggtgctgaagcagaacccgttctggtggacacaccagcggcac
gacggcaaactctggaacctgaacaattaccgcacggacatgatccaggccctgggcggg
gtggaagggatcctggagcacacactcttcaagggcacctacttccccacctgggagggt
ctcttctgggagaaggccagtggctttgaggagtccatgaagtggaagaagctgacaaat
gcccagagatcgggtttgaaccaaattccaaacagaagattcactctctggtggtctcct
accattaacagagccaatgtgtatgttgggttccaggtgcagctggatttgacagggatc
ttcatgcatggcaagatccccacgctgaagatttccctcatccagattttccgagctcac
ttgtggcagaagatccacgagagcattgtcatggatttgtgtcaggtgtttgatcaagag
ctggatgctctggagattgagaccgtgcagaaagagacaatccaccccaggaagtcctac
aagatgaattcctcgtgtgcagatatccttctctttgcttcctacaagtggaatgtgtca
cgtccatccttgctggcagattccaaggatgtgatggacagcaccaccacccagaagtac
tggattgacatccagctgcgctggggcgactacgactcccacgacatcgagcgctatgca
agggccaagttcctggactacaccacagacaacatgagcatctacccctctcccactggg
gtgctcattgccattgatctggcctacaacttgcacagtgcttatgggaactggttccct
gggagcaaacctctgatccagcaggccatggccaaaatcatgaaagcaaaccctgccctg
tatgtgttgagggaacgaatccgcaaagggctgcagctctactcctcagagcccacagag
ccctacctgtcctcccagaactatggggagctcttctccaaccagatcatctggtttgtg
gatgacaccaacgtgtacagagtcaccatccacaagacttttgaagggaatttgaccaca
aaacccatcaatggagccattttcatcttcaatcccagaactggacagctcttcctgaag
atcatccacacatctgtgtgggcagggcagaagcgtctgggacagctggccaagtggaag
actgctgaggaggtggctgccttgatccgatcccttcccgtggaggagcagccaaagcag
atcatagtgacacggaagggcatgctggacccacttgaggtgcacttgctggatttcccc
aatattgtgatcaaaggctcggagttgcagctacccttccaggcctgtctgaaagtggag
aagtttggtgatctcatcctgaaggccactgaaccccagatggttctcttcaatctctat
gatgactggctgaaaaccatctcttcctacacagcattctcccgtctgatcctgattctc
cgggcactacacgtgaataacgatcgagccaaagttatcctgaagccagacaagacaacc
atcactgagcctcaccacatctggccaaccctgacagatgaggagtggatcaaggtggag
gtgcagctgaaggatctcatccttgctgactatggcaagaagaacaacgtgaacgttgca
tccctgacccagtcagagatccgagacatcatcctgggcatggagatctctgccccatct
cagcagaggcagcagattgcagaaatcgagaagcaaaccaaggagcagtcgcagctgacg
gccacgcagacccgcacggtgaacaaacacggggatgaaatcatcacctccaccaccagc
aactacgaaacacagaccttctcctccaagactgagtggagggtcagagcaatttctgct
gccaacctgcacctgcggacaaaccacatctatgtctcatcggatgacataaaggagacc
ggttacacctacattcttcccaaaaatgtgttgaagaagttcatctgcatctcagacctg
cgggcccagattgcaggttacctgtatggagtgagccctccagacaacccccaggtgaag
gagatccggtgcattgtgatggtgccccagtgggggacacaccagaccgtgcacctgcca
gggcagctgccacagcatgagtatctcaaggaaatggaacctctgggatggattcacacc
caaccaaacgagtcccctcagctctcaccacaggatgtcaccacccacgccaaggtcatg
gctgacaacccctcctgggatggggagaagaccatcatcatcacctgcagtttcacccct
ggctcctgcacgttgacagcctacaaactgaccccgagtgggtacgagtggggccggcag
aacacggacaaagggaacaatcccaagggttacctcccctcccactacgagagggtgcag
atgctcctgtctgaccgattcctcggcttcttcatggtccctgcacagggctcctggaac
tacaacttcatgggtgtccgccacgaccccaacatgaagtacgagctgcagctcgccaac
cccaaggagttttaccacgaggtccatcgcccctctcacttcctcaacttcgcgctgctg
caggagggggaggtttactctgccgaccgcgaggatctctacgcctaa
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integrated database retrieval system
