Sturnus vulgaris (common starling): 106853383
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Entry
106853383 CDS
T08833
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
106853383 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svg04131
]
106853383 (RABGEF1)
Membrane trafficking [BR:
svg04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
106853383 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
106853383 (RABGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
106853383
NCBI-ProteinID:
XP_014732065
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MRKMNLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWEL
AERLQREEEEAYASSQSTQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFTASSRAGAKKAE
IQEAKAPSPSIHRQASIETDRVSKEFIEFIRTYQKPGQDIYKQCKLFLDTMSHKRDLSIE
EQSECAQDFYQNVADRLQTRWKVPPEKVEKAMDEVEKYIMTRQYKYVFCPETTDDEKKDL
AVQKRIRALHWVTPQMLCVPVSEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSK
HIFNAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYF
TNLCCAVAFIEKLDAQSLNLSQEDFDRFMTGQTSPKKQESDSFSPDVCLGVKQMCKSLDL
LSQLNERQERIVSEAKKLEKDLIDWTDGITKEVEDIVEKYPLEIKPKSQALAAIDSENVE
NDKLPPPLQPQVYAG
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaatgaacctgaaatcggagcgcagaggaatccacgtggatcagtcggagctg
ctgtgcaagaagggctgtggttactatggcaatcctgcctggcagggcttttgctccaag
tgctggagggaggaataccacaaggccaggcagaagcagatccaagaggactgggagctg
gcagagcggctccaacgtgaggaggaagaggcctatgccagcagccagagcacccaaggg
gcacagtccctgaccttttccaagtttgaggagaagaaaaccaatgagaaaacaagaaag
gtcactactgtgaaaaagttcttcactgcttcctccagagcaggagctaagaaggcagag
atccaggaggccaaagctcccagcccttccatccacaggcaggccagcatcgagactgac
agagtgtccaaggagttcatagaattcatcaggacttaccagaagcctggccaggacatc
tacaagcaatgcaaactctttttggacaccatgagtcataaaagggatttgagcattgag
gaacaatctgagtgtgcccaggacttctaccaaaatgtagcagacaggctgcagacacgt
tggaaagtgccccctgaaaaagtggagaaggcaatggatgaggttgagaaatacatcatg
actcgacagtataaatatgttttttgccctgagacaactgatgatgagaagaaagacctt
gctgtgcaaaaacggatcagggctttgcactgggtgactccccagatgctgtgtgttcct
gtgagtgaggaaatcccagaagtctctgacatggttgtaaaggcaatcacagatatcatt
gagatggactccaagcgtgtccctcgggataaactggcctgcatcaccaaatgcagcaaa
cacatcttcaatgccatcaaaatcaccaaaaatgagccagcatctgctgatgatttcctg
cccaccctgatttacatcgtgctcaaggggaaccccccacgcctgcagtccaacatccag
tacatcactcgattctgcaaccccagcaggctcatgactggggaggatggatattatttc
accaacctgtgctgtgccgtggccttcattgaaaaactggatgctcagtctttaaatctg
agccaggaagattttgatcgtttcatgactggccagacctccccaaaaaagcaggaatct
gacagtttctcccctgatgtgtgcctgggggtgaagcaaatgtgcaaaagcttagacctc
ctctctcagttgaatgagagacaggaaagaattgtcagtgaagccaagaagctggagaag
gacctgattgattggactgatggcatcaccaaggaggtggaagatattgtggagaaatat
cccttagagatcaaaccaaaaagtcaagccttagcagccattgactctgaaaatgtggag
aatgacaagctgcccccaccactgcagcctcaggtttatgcaggataa
DBGET
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