Sturnus vulgaris (common starling): 106853395
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Entry
106853395 CDS
T08833
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1 isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106853395 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
svg04040
]
106853395 (TRPV1)
Ion channels [BR:
svg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106853395 (TRPV1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
Ion_trans
Ank_3
Ank_5
Ank_4
PKD_channel
Motif
Other DBs
NCBI-GeneID:
106853395
NCBI-ProteinID:
XP_014732091
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MSSILGKMKKFGSFDMEESEVTDEHTDGEDSVQETPDNLQGPPSTKVQPLKSNIFARRGR
FVMGDSDKNMAPMDSFCQMDHLMAPSVIKFHVNLERGKLHKLLSTDSITGCSEKAFKFYD
RRRIFDAVAQGNTKDLSDLLLYLNRTFKHLTDEEFKEPETGKTCLLKAMLNLQDGKNDTI
PLLLDIARKTGTLKEFVNAEYTDNYYKGQTALHIAIERRNMYLVKLLVQNGADVHARACG
EFFRKIKGKSGFYFGELPLSLAACTNQLCIVKFLLENPYQAANIAAEDSMGNMVLHTLVE
IADNTKDNTKFVTKMYNNILILGAKINPILKLEELTNKKGLTPLTLAAKTGKIGIFAYIL
RREIKDPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEILAYSSETPNRHEMLL
VEPLNRLLQDKWDRFVKHLFYFNFFVYTIHITILTAAAYYRPVQKNEKPPFTFGYSTGEY
FRVTGEILSVLGGLYFFLRGIQYFVQRRPSLRTLIVDGYSEVLFFVHSLLLLSSVVLYFC
GQELYVASMVFSLALGWANMLYYTRGFQQMGIYSVMIAKMILRDLCRFMFVYLVFLLGFS
TAVVTLIEDDNEGQETNISDYARCCHMKRGRTSYNSLYYTCLELFKFTIGMGDLEFTENY
RFKSVFVILLVLYVILTYILLLNMLIALMGETVNKIAQESKSIWKLQRAITILDIENSYL
NCLRHSFRSGKQVLVGITPDGQDDYRWCFRVDEVNWSTWNTNLGIINEDPGYSGELRRNP
SFSIKPGRVSGKHWKTLVPLLKDGEKRREEPHKAPEEAKLKPVLEPYFEPEDCEVLKESI
PKSV
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccattcttgggaagatgaagaagtttggcagttttgacatggaggaatctgaa
gtgacagatgaacacacagatggggaggactctgtccaggaaacccctgacaacctccag
ggcccacccagcaccaaggtgcagccactcaaaagcaacatttttgcaaggcgaggccgc
tttgtgatgggggacagtgacaagaacatggctcccatggactccttctgtcagatggat
cacctgatggcaccttctgtcatcaaattccatgtgaatttggagaggggaaaacttcac
aagctcctgtctacagattccatcacaggctgctcagaaaaagctttcaaattttatgac
cgcagaaggatctttgatgctgtagcccaaggcaacacaaaggacctcagtgacctgcta
ctttaccttaatagaaccttcaagcatctcacagatgaagagttcaaagagcctgaaact
ggcaaaacctgtttactgaaagccatgctgaatctacaggatgggaaaaatgataccatt
cccttgctgctggatattgcaagaaaaactggaactctgaaagagtttgttaatgcagaa
tatactgacaactactacaagggccagactgctcttcacattgccatcgagaggaggaac
atgtacctggtgaagctcctggtccagaatggagcagatgttcatgccagagcctgtggg
gagttcttcaggaaaatcaaagggaaatctggcttttattttggagagctgcctttgtcc
ctggctgcctgcaccaaccagctctgcattgtgaaattcctcctggagaatccctaccag
gcagccaacatcgctgctgaggactccatgggcaacatggtcctgcacacactggtggag
attgcagataacaccaaggataacaccaagtttgtaaccaagatgtacaataacatattg
atccttggtgccaaaattaatcccatcctcaagctggaagaactcaccaacaagaaaggg
ctgactcctttaactctggcagccaaaacagggaagatagggattttcgcttacatcctc
agacgagagatcaaagaccccgagtgcagacacttgtccaggaagttcactgaatgggcc
tatggacctgtccactcctctctttatgacctgtcctgtatagacacctgtgagaaaaat
tcagtgcttgagatccttgcctacagcagtgagacaccaaaccgtcacgagatgctgctg
gtggaaccccttaacaggctgctgcaagacaagtgggatcggtttgtcaagcacttgttt
tacttcaacttctttgtctacaccatacacatcaccatcctcactgcagctgcttactac
agacctgtacagaagaatgaaaagcctcccttcacctttggttacagcactggggaatat
tttcgagtaactggagagatcctgagtgtactggggggcctctatttttttctcagaggg
atccagtattttgtgcagaggcgcccatccctcaggacactgatagttgatggctacagt
gaggttcttttctttgtccattccctgctcctgctgagctctgtggtgctctacttctgt
ggccaggagctctatgtggcatccatggtgttctccttggccctgggctgggccaacatg
ctctactacacccggggcttccagcagatgggaatttactccgtcatgatcgccaagatg
atccttagagatttatgtcgcttcatgtttgtctatctcgtattcctcttggggttttct
acagctgtggtgactttgattgaagatgacaacgaggggcaggaaacaaatatctctgac
tatgccaggtgctgccacatgaaacgaggccgcacctcctacaacagcctctactacacc
tgcctggagctcttcaagttcaccattggcatgggggacctggagttcacagagaactac
aggttcaaatctgtgtttgtcatcctgctggtgctctatgtcatcctcacctacatcctc
ctgctcaacatgctcattgcactgatgggggagactgtcaacaaaattgcacaggagagc
aagagcatctggaaactccagagagccatcacaatcctggacattgagaacagctacctg
aactgtctgaggcactcgttccgctctgggaagcaagtcctggtggggatcacacctgat
ggccaagatgattacaggtggtgcttcagggttgatgaagtgaactggtccacatggaac
actaacctgggcataatcaatgaagaccctgggtactctggggagctcagacgaaatccc
agtttctccattaagcctggcagagtttcagggaagcactggaaaacattggttccactt
ctgaaagatggagagaagaggagagaagagcctcacaaggcaccagaagaagccaaatta
aaacctgttttggagccttattttgagccagaagattgtgaggtgttgaaagaatcaatt
ccaaagtcagtataa
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