Sturnus vulgaris (common starling): 106853696
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Entry
106853696 CDS
T08833
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106853696 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svg03000
]
106853696 (ATRX)
03036 Chromosome and associated proteins [BR:
svg03036
]
106853696 (ATRX)
Transcription factors [BR:
svg03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
106853696 (ATRX)
Chromosome and associated proteins [BR:
svg03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
106853696 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
DUF6395
Motif
Other DBs
NCBI-GeneID:
106853696
NCBI-ProteinID:
XP_014732589
LinkDB
All DBs
Position
Unknown
AA seq
2472 aa
AA seq
DB search
MEQLFKASLASRCCFLLESKLTTLVQKLHDFLAHSSEESEDANSPPALPKNKSIGKNREP
KGNPASMENNRDEGSSSSEKTKSLGLSRSKRKPTVVTKYVGSDDEQIVDETVNEDISNEN
SENDVDMQSLPKGTVVVQPEPVLNEDKDDFKGPEFRSRNTVKMKPEAPKKRGEEGLHGIV
SCTACGQQVNHFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQCRWCAEGGNL
ICCDFCHNAFCKKCILRNLGRKELSTILDENNQWHCYICHPEPLLDLVTACDSVFENLEQ
LLQQNKKKMKVENEKSKIYDHAVKFSPKKNNANCNGEEKKLDNSYSGSLTYSYKALMVPK
DLLKKTKKLIETTTNLNSSFVSFLKNAAENVEISPTVQLCQLKAFKSVLSDMKKAHLSLE
EGLNLEIQALNVKIKDKNTKEKKTEVRSEKNEVKKDEGKERVALKEDAATQTQKKVVSEQ
PDNEPMDQSVPSVEQTDNKAAPEEEKKSGGNEEPQYEPNSTEALDMDIVSIPSSVPEDIF
ETLESAMEIQMPSDEQDSGNTAADHETPNSNTKLNTPVKDTKGGTKLKSSAKGTKELIVK
LTPVSLSESTVKADDQDSSLEKDNKDNDASQAVAASQNVDASQDVDASQDVDASQDVDAS
QARAADCDSVKQNHSVGSEPSTENDTVPVEDSDLRRSPRVKTTPLRRPTDISPLTSNSEE
DSNDTSNEKQKGKPSKQAGRKNDKKNSSDSTADGPSPKKVSKSKKPYDLDHSSDSDELPA
VLKEAGMMSRSSSDSESNSEAPAKNQQASDFQKSQPVKDENGKRKRKSSSSGSDLDAKRG
KSAKNAAAAKKKRQNYSDSSNYDSELEKEIKMLSKIDAAKKSKKKFSQKDDSYDSSEEEQ
RNKVSSKKKVNLKKKRGKSSEDDDAEKSSPEKEINHSSKDKKTGKRSAAKDKINRDSKEK
SAKGKRDESSDAERSSLEKEESPEVKKKDLKKKKTQDDSSSESTEKSAKKEHKLESSKDK
LKNKKGSESKAKKSEKLKKKGFKKEQDDSSSDPDKSSPEKGSGNSSENDKIKKEPVLTEK
RKLRERVAKRVRIDLSSDTEKSPQKEESSDDDAMRRKKRTDTKEKKKISHKKKISKKEQN
DSSSSDEESYEDTKKKVKRGSVKESKKSNLKKKVAKKKVVVTSSSSSDKEASDKEENDDQ
NSTGDGSSDEQKIRPVTESLMLSADAGFCQSSGDEAEALSRTIPMEEEEDDDDDDPENRI
AKKMLLEEIKANLSSDEDTSSDEQPVEGKKKPAKQTENTGEDGEKEKEDKKSEKEEGDSE
SDSEEEETSKKPRYRHRLLRHKLTVSDGESGEEKKVVKPKDKKEGGKRRHRRKVSSDDSN
DSEFHESAVSEEVSESEDDQRPRTRSAKKAEAEENQRSYKQKKKRRRIKVQEDSSSENEN
KSNSENEDNDDSKSPGKGRKKIRKIIKDDKLRTETQNALKEEEERRKRIAEREREREKLR
EVIEIEDASPLKCPITTKLVLDEDEETKEPLVQVHRSIVTRLKPHQVDGVQFMWDCCCES
VKKTKTSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFRTALVVCPLNTALNWLNEF
EKWQEGLEDEEKLDVYELATVKRPQERSYMLQHWQDEGGVMIIGYEMYRNLAQGRNVKSR
KLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEY
HCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTLVDVRVMKKRAHILYEMLAGCVQRK
DYTALTKFLPPKYEYVLEVRMTPIQCKLYQYYLDHLTGVGGGNEGGRGKAGAKLFQDFQM
LSRIWTHPWCLQLDYISKENKGYFDEDSMDDFIASDSDETSMSLSSDDYAKKKKSKGKKA
KKECSSSGSGSDNDVEVIKVWNSRSRGGGEGNVEDLTNNPASTKSDEGKATSSSNPGSPA
PDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEELGDKVLVFSQSLISLDLIEDFLELAN
REKSDRDKPSIYKGEGKWFRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA
GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQNKPVFVYRFLAQGTMEDKIYDRQ
VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKKRDTPMLPKDTILAE
LLQINKEYIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGMTMRFNMPTGTNTMP
TNFSSQTYIPYNLGALSAMSNQQLEDLINQGREKVVEATNSVAAARIQPLEDIISSIWKE
NLTLTESQVQALALNRQASQELDVKRREAIYNDVLGKQQMLIGCVQRILMNRRLQHQYNQ
QQQQQMSYQQAAMGHLMMPKPPNLIMNPSSYPGIDVRGMYQSVSGGMQPPPLQRAPPPMR
GKNPGPSQGKSM
NT seq
7419 nt
NT seq
+upstream
nt +downstream
nt
atggaacagctttttaaggcaagcctggcatcgagatgttgctttttacttgaaagcaag
ttgactacattggtacagaaactccatgacttcttggctcactcatcagaagaatctgag
gacgcaaactctcctccagcattacctaaaaacaaaagtataggtaaaaacagagaacct
aaaggaaacccagcttcaatggagaacaacagggatgagggaagtagttcttcagaaaaa
accaaatcattaggattatcccgttccaaaaggaaacctacagtcgtaacaaaatatgtt
gggtcagatgatgaacaaatcgtagatgaaactgtaaatgaagatatttcaaatgagaac
tcagagaatgatgtagatatgcaaagcttgcctaaaggtacagtggttgtacagcctgag
ccagtgctgaatgaagacaaagatgattttaaagggcctgaatttagaagcagaaatacc
gttaaaatgaaacctgaagctcccaaaaagcgtggagaagaaggactccatggaattgtg
agctgtacagcttgtgggcagcaggtgaaccattttcaaaaggattcaatctatagacac
cctacactgaaagtgcttatttgtaagacttgttacaagtattacatgagtgatgacatc
agtcgtgattcagacgggatggatgaacagtgtaggtggtgtgctgaaggtggaaatttg
atttgctgtgacttttgccataacgccttctgtaaaaagtgcattttgcgcaacctgggc
cgaaaggagctctcgactatccttgatgaaaataaccagtggcactgctatatttgccat
ccagagcctttgttggacttggtcactgcgtgtgacagtgtctttgaaaatttagaacag
ttacttcaacaaaacaaaaaaaagatgaaagttgaaaatgaaaaaagtaaaatatatgac
catgcagtcaagttttctccaaagaaaaacaatgcaaattgtaatggggaagaaaaaaaa
ctagataattcatattcaggttcattaacatattcttataaagcactaatggtgccaaaa
gacttgcttaagaaaacaaaaaaactgattgaaactacaacaaatctgaattctagcttt
gtaagctttttgaaaaacgctgcagaaaatgtagaaataagcccaactgtgcaactgtgc
cagctgaaagcttttaaatctgtgctgagtgacatgaaaaaagctcatctgtctctagaa
gaaggcctgaacctggagattcaagcattgaatgttaaaatcaaagataaaaataccaaa
gagaaaaaaactgaggttagatcagaaaaaaatgaggtgaaaaaagatgaaggaaaggaa
cgtgtcgcattaaaagaggatgctgccacacagacacagaaaaaagttgtgtcagagcag
cctgacaatgagcccatggatcaaagtgttccctcagtggaacagacagataacaaggca
gctcctgaggaagagaaaaagtctggtggaaatgaagaaccgcagtatgagcccaacagt
acagaggctttggacatggatattgtgtccatcccctcgtctgttcctgaagatattttt
gagactctggaatctgctatggagattcagatgccatcagatgagcaggacagtggaaac
acagcagcagaccatgagactccaaactcaaatacaaaactaaacactcctgtgaaagac
accaaaggtggtaccaagttaaaatcgtcggctaaaggaacaaaagaactgattgtaaaa
ttgactccagtttccctttcggagtccacagttaaagctgatgatcaagacagcagccta
gaaaaggacaataaagacaatgatgcatctcaggctgttgctgcatctcagaatgttgat
gcatctcaagatgttgatgcatctcaggatgttgatgcatctcaagacgtcgatgcatct
caagctagggcagcagactgtgactctgtgaaacaaaaccacagcgttggcagcgagccc
tccacggagaacgacactgtgcccgtggaggactcggatctccggaggtcaccacgtgtc
aaaaccaccccactgaggcgccccacggacatcagccccctgacatccaactcagaggag
gacagcaacgacacgagcaatgaaaaacagaaggggaaaccatccaagcaagccgggagg
aaaaacgataaaaaaaattcatctgacagcactgctgatggtcccagtcctaagaaagtt
tccaaatccaaaaagccatatgacttggatcacagctcagactctgatgagttgccagct
gtccttaaagaagcagggatgatgagtcgcagctcctcagacagtgagagcaacagtgaa
gcgccagcaaagaatcagcaggcttcagattttcaaaagagtcaaccagtaaaggatgaa
aatgggaaacgaaaaaggaaaagttccagttccggctcagatttagatgctaaaagaggc
aaatcagctaaaaatgctgctgctgctaaaaagaaacgacaaaactactctgattcttca
aactatgattctgagttggaaaaggagataaaaatgttgagtaaaattgatgctgcaaaa
aaatcgaagaaaaaattctcacaaaaagatgatagttacgattcctctgaagaagagcag
aggaacaaagttagcagtaagaaaaaggtaaatctgaagaaaaagagagggaaatcttct
gaagatgatgatgctgagaagtcttctccagagaaggaaattaatcactcttctaaagat
aagaaaacgggtaagaggtcagctgctaaggacaagataaacagagactcaaaagaaaaa
tctgcaaagggaaaacgtgatgagtcttctgatgctgagaggtcttcactggagaaggag
gagagtcctgaagttaagaaaaaggatttgaaaaagaaaaagacacaggatgattcttct
tctgagagtactgagaaatcggcaaagaaagagcacaagttggaatcttcaaaagacaag
ctcaagaacaagaaaggttcagaaagcaaagcaaagaaatctgaaaaattgaaaaagaaa
ggtttcaagaaagaacaagatgattcctcttctgatcctgataagtcatctccagagaaa
ggcagtggcaattcttctgaaaacgacaaaattaaaaaggagcccgtgttaacagaaaag
aggaaattgagagagagagtagctaaaagagtgcgcattgatttatcctctgatactgag
aaatctccccaaaaagaggagagttctgatgatgatgccatgcggcgtaaaaagcgaact
gacacgaaagaaaagaaaaaaataagccacaaaaagaaaatttccaagaaagaacagaat
gactcgtcttcttctgatgaggagtcctatgaagacactaagaaaaaggttaaaagagga
tcagtaaaagaaagtaaaaagagcaacttaaaaaagaaagtggcaaaaaagaaggtggtt
gtcacttcctcttcttcgtctgataaggaagcgtctgataaggaagagaatgacgatcag
aattccacaggcgatggaagcagcgacgagcagaagatcaggccggtgaccgagagcttg
atgctgtctgctgatgcaggattttgtcagtcatcaggagatgaagcagaggctctatca
aggactatcccaatggaggaggaggaagatgatgatgatgacgaccctgagaatagaatt
gccaagaaaatgcttttagaagaaatcaaagccaatctttcctctgatgaggatacgtct
tcagatgagcagccggtggaaggaaaaaagaaacctgcaaagcaaactgaaaacacagga
gaggatggagagaaggaaaaggaagacaagaagtctgaaaaggaagaaggtgattctgag
tcagattcagaggaagaagaaacatccaagaagcccagatacaggcacagactgctgagg
cacaaactcactgtgagtgatggggagtctggagaagaaaagaaggtggtgaaaccaaaa
gacaaaaaggaaggagggaagcgaagacatagaaggaaagtgagcagtgatgactcaaat
gactccgagttccacgagtctgcagtgagtgaagaggtcagtgagtctgaggatgaccaa
aggccaaggacaagatctgccaaaaaagctgaggcagaagaaaaccagcgcagctacaaa
cagaaaaagaaacgaaggaggataaaggttcaagaggattcatcaagtgaaaatgagaat
aagagcaactctgagaatgaggacaatgatgactcaaaatctcctggaaaaggcaggaag
aaaatcaggaaaattattaaagatgataagcttagaacagaaacacaaaatgcacttaaa
gaagaagaagaaagaagaaaacgaatagcagagagagaacgagagagagagaaattgaga
gaggtgatagagattgaagatgcttcacctctgaaatgtcccattacaaccaagctggtt
ttagatgaagatgaagaaaccaaagaaccattagtgcaggttcacaggagtatagtgacc
agactgaaaccacaccaagtagatggtgttcagttcatgtgggattgctgttgtgaatct
gtaaaaaaaaccaagacatctcctggctctggctgcattcttgctcactgtatgggcctg
gggaaaacattacaggtagtaagttttctccacacagtcttgctgtgtgacaagttggat
tttcggacagctctggtcgtgtgtccactcaacactgccttgaactggctgaatgagttt
gaaaaatggcaagaaggtttagaagatgaggaaaaactagatgtctatgagctggcaact
gtgaaaaggcctcaggagaggagctacatgctgcagcactggcaggatgagggaggtgtg
atgatcattggctacgagatgtatcgaaacctggcacaaggcaggaatgtgaagagtaga
aaacttaaagaaatatttaataaagctttagtcgacccaggtcctgacttcgtggtgtgt
gatgaaggacacatattgaaaaatgaagcatcagctgtctctaaggcaatgaattctatt
agatctaggagaagaataattctgacaggaacaccactgcagaataatcttatagaatat
cactgcatggttaacttcattaaggagaatttgctgggctcaattaaggaattccggaat
cgattcatcaatcccatccagaatgggcagtgtgcagactccactctggtggatgtcagg
gtgatgaagaaacgtgctcacatcctctatgagatgttggctggctgtgttcagaggaag
gattacacagcattaaccaagttcctgccccccaaatacgagtacgtgctcgaggtgcgg
atgaccccgatccagtgcaagctgtaccagtattacctggatcatttgacaggtgtaggt
ggtggcaatgaaggtggaagaggcaaagctggagctaaactgttccaggatttccagatg
ttgagcagaatctggactcacccttggtgtttgcagctggactatattagcaaagaaaat
aagggctattttgatgaagacagcatggatgacttcatagcttcagattctgatgaaact
tccatgagcttaagttctgatgattatgcaaagaaaaaaaaatccaaggggaaaaaggca
aagaaggagtgtagctcaagtgggagtggcagtgataatgatgttgaagtcattaaagtc
tggaattcaagatctcgtggaggtggggaaggaaatgtagaagatcttacaaacaaccct
gcatcaacaaagtcagatgaaggcaaagctacatcctcttccaatcctggtagcccagct
ccagactggtacaaagattttgtcactgatgcagatgctgaagtgttggaacattctggg
aaaatggtgctgctctttgaaattcttcgaatggcagaggagctgggagacaaagtcctt
gtgttcagccaatccctaatatctctggatttgatagaagatttcctggaactggctaac
agagagaaatctgatagagataagccttccatctacaaaggtgaaggaaaatggttcaga
aatattgattattatcgtttggatggctcaaccacagctcagtccagaaagaaatgggct
gaggagtttaatgatgaaactaatgtgagaggccgcttgtttatcatatccaccaaagca
ggttccttgggaataaacctggtggctgctaacagagtcatcatctttgatgcctcctgg
aacccctcctatgacatccagagcatcttcagggtttatcgttttgggcagaacaagcct
gtgtttgtgtacaggtttttggctcagggaaccatggaggacaagatctacgaccggcag
gtgacgaagcagtcgctgtccttcagggtggtggaccagcagcaggtggagaggcacttc
accatgaacgagctcaccgagctctacaccttcgagcctgacctgctggacgaccccaac
tcggagaaaaagaagaagagggacacccccatgctgccaaaagacacgatcctggcagag
ctgctccagatcaacaaggagtacatagttgggtaccacgagcatgattcactcctggac
cataaggaggaagaggaactcactgaagaagagaggaaggcagcctgggcagaatatgaa
gcagaaaagaagggcatgaccatgcgtttcaacatgccaacagggaccaacacaatgccc
acaaatttcagctctcagacttatattccttacaatttgggtgctctgtcagcaatgagc
aaccaacagctggaggacctcattaatcaaggaagagagaaggtggtggaagcaaccaac
agtgtggctgcagcaagaatccagccccttgaagacatcatttcatccatttggaaagaa
aacttaaccctgacagagagccaggtgcaggccttggccctgaacagacaggcgagccag
gagctggatgtgaagcgcagagaagccatttacaacgacgtcctcgggaaacagcagatg
ttaatcggttgtgtccagaggatcctgatgaacaggcggctccagcaccagtacaaccag
cagcagcagcagcagatgtcctaccagcaagcagccatgggccacctcatgatgccaaag
cctccaaatttgatcatgaatccttccagctacccaggcatagatgtgagaggaatgtat
cagtcagtgtctggtgggatgcagccaccacccctacaacgagcaccacccccaatgaga
ggcaaaaatccagggccttcccaagggaaatcaatgtga
DBGET
integrated database retrieval system
