Sturnus vulgaris (common starling): 106853857
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Entry
106853857 CDS
T08833
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03440
Homologous recombination
svg03450
Non-homologous end-joining
svg04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106853857 (RAD50)
03450 Non-homologous end-joining
106853857 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
106853857 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svg03032
]
106853857 (RAD50)
03400 DNA repair and recombination proteins [BR:
svg03400
]
106853857 (RAD50)
DNA replication proteins [BR:
svg03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
106853857 (RAD50)
DNA repair and recombination proteins [BR:
svg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
106853857 (RAD50)
BRCA1-C complex
106853857 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
106853857 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
Rad50_zn_hook
AAA_21
AAA_15
SbcC_Walker_B
DUF2703
AAA_29
Motif
Other DBs
NCBI-GeneID:
106853857
NCBI-ProteinID:
XP_014732824
LinkDB
All DBs
Position
Unknown
AA seq
1311 aa
AA seq
DB search
MSRIEKMSILGVRSFGVEDKDKQIITFFNPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGKTFVHDPKVANETDVRAQIRLQFRDVNGELIAVQRSMVCTQKGKTPEFKTLESVITR
TKHGEKVSLSSKCAEIDREMISALGVSKSVLNNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALEALRQVRLKQSLKVKECQTELKYLKQNKEKAQEIQDHLSNREALLAASKEN
VMSIENQLEPLKTSLAVVEQNLTKLMRLDNDVKALESRKRQMEKDNQDLQQKIEKVFQGT
DEQLMDRYQNHQRIVKEKEKRLLDCKRDLDRATKECQRFNSEKSELLIERGRLQLQADRH
QEHIVTRDSLIQSLAAQLELDGFERAPLTERHIASFCRLVKDRQERDTEAADHVMREFAQ
KEAMKQKQVDEIRDKKTGLESTIDLKSDIQKKKQAELKNVKCELQQLEGFSDRISELDEE
IGKMEHELEKAERSINAETLEQEVQTLQNEKINLDKALRRLDQEMEQLNLHTTTITQMEM
LKKDKAEKEDQIRKVKSRHSEELTSLLGYFPNRKQLEDWLHGKNKKINQTRDTLANLNKQ
LASVEYDKTYASNELKKKEAQLSYHEAKLFDVCGSQDFDGDLSRLQDEIEKSSKQRAVLA
GATAVYSQFITQLTEENQSCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELKR
KEKKRDEMMSLKPLRRTVVELQDKEIPDLRNKIQNANRDLTGLKSEIEEQESLLQTALSE
EEGAKAHLQDITLMERYQIDIRDAERKIAQQEAKLLGVDLSRTVLQVSQEKQEKKHLWDT
ITGKIELNQKLKQDQQSQIQQLKSTLNELKAEKLQIVSSMQRRRQLEEQAVELTTEVQSL
CREIKEAKEQVLPLDAMLDKLQQEKEELVNKRTASNKETQEKMNGINEKVKDINKYMKEI
ENYIQEGKEDYRKQKQFELDEVNSQLAACEKQKEKISKEMEMTRQDIDTQKIQERWLEDN
LTLRKRNDELKEVEDNIKQLMKEMGEMKVPQMKSEQKHLEEKIESLKRNHHIALGRQHGF
EEEIVRFRKELKEPQFKDAEEKYRDMMIVMRTTELVNKDLDLYYKALDKAIMTFHSIKME
EINKIIRDLWRSIYRGQDIEYIEIRSDVDENVSATDKRRNYNYRVVMVKGDTALDMRGRC
SAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRLHQRN
FQLLVITHDEDFVELLGRSEYVETFYRIKKNIDQCSEIMKCSVSSLGSCVH
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggattgaaaaaatgagtatcctcggagtgaggagttttggggtagaagataaa
gacaaacaaattatcactttctttaatccattaactattctggtgggaccaaatggtgca
ggaaaaacgactatcattgaatgtcttaaatatatatgcactggtgattttcctcctggc
accaaaggaaaaacatttgttcatgatccaaaggttgccaatgaaactgacgttagagct
cagattcggttacagtttcgagatgtcaatggggagctcatagctgtccagcgctccatg
gtctgtacccagaaaggcaagactccagaatttaaaacactggaatctgtcattactaga
acaaagcatggcgagaaggtcagtctgagttccaagtgtgctgaaatagatcgggagatg
atcagcgcccttggtgtttccaaatctgttcttaacaatgtcattttctgtcaccaagaa
gaatccaactggccgttaagtgaagggaaggccctgaaacaaaaatttgatgagatcttt
tcagcaacaaggtatatcaaagcacttgaagctctgcgtcaggtacgactgaaacaaagc
ttgaaagtaaaagagtgtcagacagaactgaaatatctaaaacagaataaagagaaagca
caggaaatccaggatcatctcagcaacagagaagctctgctggctgcttctaaggagaat
gtaatgtcaattgagaaccagcttgagcctctaaagacctctctggcagtagttgaacag
aatctcacaaaattgatgagattggacaatgatgttaaggccctcgagagcaggaagcgg
cagatggaaaaagataatcaagatttgcaacagaaaattgaaaaggtttttcaaggaaca
gatgaacaactaatggatagataccagaaccaccagagaatagtgaaggagaaggagaag
agattgttggactgtaagcgtgatttagatagagccactaaagagtgccagaggtttaac
agtgagaaatcagagctgcttattgaacgaggtcgtcttcaactgcaggcagatcgtcac
caagagcacattgtgaccagggattccttaattcagtctctggcagctcagctggaatta
gatgggtttgagcgagcacctttaactgaaaggcacattgctagtttttgcaggttggtg
aaggacagacaggagagagatacagaagcagcagatcatgtgatgagagaatttgctcag
aaagaagcaatgaaacaaaaacaggtagatgaaataagagacaagaaaactggattagaa
agtaccattgacctgaaatcagacatccagaaaaagaaacaagcagagctgaagaatgta
aaatgtgaattgcagcagttggaggggttttcagacaggattagtgagttggatgaggag
attggcaagatggaacatgagctggagaaggctgagaggagcatcaatgcagaaacactg
gaacaggaagtacagactctgcaaaatgagaaaataaatctggacaaagctcttaggcgg
ctggatcaagagatggagcagttgaatctgcacaccacaacaattacccagatggagatg
ctgaagaaagacaaagcagagaaagaagatcagattagaaaagtaaagtcaagacattct
gaggagctaacatcactgctgggatactttcccaatagaaaacagcttgaagactggctt
catggtaaaaataaaaagattaatcagacaagggatactcttgcaaatcttaacaagcaa
ctggcatcagtagaatatgataaaacttatgccagtaatgagctaaaaaaaaaagaagcc
cagttgtcctatcatgaagcaaaactttttgatgtttgtggaagtcaggattttgacggt
gacctgagcagacttcaagatgaaattgaaaaaagttccaagcagcgagctgtgcttgct
ggagccactgcagtttattcacagttcattacacaactgacagaggagaaccagtcttgt
ccagtttgccaaagagtttttcagacagaggctgaactgcaagatgtcattagtgatctg
cagtctaaactgcgccttgccccagacaaactgaagtcaacagagtctgagcttaaaaga
aaagagaaaaaacgtgatgaaatgatgagtcttaaaccactgcggcgaactgtagttgaa
ctccaagataaggaaattccagacctgaggaacaagatccagaatgcaaacagagattta
acaggcctgaagagtgagatagaagaacaggaatcactcctccagacagctttgtctgag
gaagaaggtgctaaagcacatttacaggatataactctgatggaaaggtatcagattgat
attagggatgctgaacgaaaaattgctcagcaggaggctaagctgctaggcgtcgattta
agtagaacagtgcttcaagtaagccaagaaaaacaagagaaaaaacacttgtgggataca
attactggtaaaattgagttaaatcaaaaactcaagcaggaccagcaaagccagattcag
cagctgaagagtacacttaatgaactcaaagcagagaagctgcagatcgtcagcagcatg
cagcggcggcggcagctggaggagcaggctgtggagttaaccactgaggttcagtcctta
tgcagagagatcaaggaagctaaagagcaggtacttcctttggatgcaatgttagacaaa
ttgcagcaggaaaaggaggaactagtgaataaaaggactgcaagcaataaagaaacacaa
gagaagatgaatggcataaatgagaaagttaaagatataaacaagtacatgaaagaaatt
gaaaactatattcaagaaggaaaagaagactatagaaagcaaaagcagtttgaacttgat
gaagtaaattctcaattggctgcctgtgagaaacaaaaggaaaagataagtaaagagatg
gaaatgacccgacaagatattgacactcaaaagatacaggaaaggtggctggaggataat
ctcactttgaggaagcggaatgatgagctgaaagaagttgaagacaatataaaacagctt
atgaaggagatgggagaaatgaaagtcccccagatgaaaagtgaacaaaaacatttggag
gaaaaaatagaatctctgaaaaggaaccatcacattgcacttggccgccagcatgggttt
gaggaggagattgttcgctttagaaaagagcttaaagagccacaattcaaagatgcagaa
gaaaaatacagggacatgatgattgttatgagaacaacagagctggtgaacaaagatctg
gacctttattacaaggctcttgataaagcaataatgacctttcatagcataaaaatggaa
gaaattaacaaaataattcgggacctatggcgaagcatttacagaggacaagatattgaa
tacatagaaattcgctctgatgtagatgagaatgtctctgccactgacaaaaggagaaat
tacaattacagggtagtaatggtgaagggagatacagcactggatatgcgaggaagatgt
agtgctgggcaaaaggtgcttgcttctctcatcattcgccttgctctagcagaaacattc
tgtctcaactgtggcattctggccctggacgagcctacaaccaaccttgatcgagaaaac
attgagtctctggcacatgccctggtagagataataaagagccgcttacatcaacgcaac
tttcagcttctggtgattactcacgatgaagattttgttgaacttctgggacgttctgag
tatgtggaaacattctacaggataaagaagaacattgaccagtgctctgagatcatgaaa
tgcagtgtcagctcgctaggctcctgtgttcattag
DBGET
integrated database retrieval system
