Sturnus vulgaris (common starling): 106854003
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Entry
106854003 CDS
T08833
Symbol
ATM
Name
(RefSeq) serine-protein kinase ATM
KO
K04728
serine-protein kinase ATM [EC:
2.7.11.1
]
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03440
Homologous recombination
svg04068
FoxO signaling pathway
svg04110
Cell cycle
svg04115
p53 signaling pathway
svg04210
Apoptosis
svg04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106854003 (ATM)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
106854003 (ATM)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106854003 (ATM)
04210 Apoptosis
106854003 (ATM)
04115 p53 signaling pathway
106854003 (ATM)
04218 Cellular senescence
106854003 (ATM)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
svg01001
]
106854003 (ATM)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svg03032
]
106854003 (ATM)
03036 Chromosome and associated proteins [BR:
svg03036
]
106854003 (ATM)
03400 DNA repair and recombination proteins [BR:
svg03400
]
106854003 (ATM)
Enzymes [BR:
svg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
106854003 (ATM)
Protein kinases [BR:
svg01001
]
Serine/threonine kinases: Other
PIKK family [OT]
106854003 (ATM)
DNA replication proteins [BR:
svg03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
106854003 (ATM)
Chromosome and associated proteins [BR:
svg03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
106854003 (ATM)
DNA repair and recombination proteins [BR:
svg03400
]
Eukaryotic type
Check point factors
Other check point factors
106854003 (ATM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PI3_PI4_kinase
FAT
TAN
FATC
M-HEAT_ATR
HEAT_ATR
HEAT
Motif
Other DBs
NCBI-GeneID:
106854003
NCBI-ProteinID:
XP_014733084
LinkDB
All DBs
Position
Unknown
AA seq
3067 aa
AA seq
DB search
MNLALHDLLNCCRRLENEKAVERRKEIENFKRLLRDSEIVLQLDRNSDSKPGKQLNWDAV
FRVLQKYFQKELKNLQQTKPNASASTQTTRQKKIQEFGSLVKYFIRCANKRGPRLKCQEL
LIYVMEVIRDPTSCAAYGSDCSSILLKDILSVRKYWCEISQQQWSELLTLYGHLYLKPSG
SINRVLVARIIHTLTRGYCFQTDGLSSDMLVFFSKAMQSARQEKNAAGLDHIVGAMNIFC
NKFADNCRIQMCKVGEEILPTVLYIWTQYRPKDSLKESIIELFRLQVHIHHPKGAKTQGR
GACDLTKWQSILHNLYDLLVNEINLINTRGKYSSGSRNIAVKENLIELMADICHQVFTEG
TKILEITQSYAVSQRESCEDMAPNKRRKIELSWGVIRDNLQRSQKDFDVIPWLQVTSQLI
SKYPMSLPNSELPALLNVLHQLLPQQRRGERTPYVLKCLTEVALCQSQKTDLKSTQKLEL
QRTWAKIWTLTIRSVSLQQIEAESFGLLGAMIQGNLVVTDKELWKIFSGPACKPSSSAAC
CLSLVMSAYSVPENLDLGMEQNSSERNLGSVLREAIMKWLLSSCLEEEIEECAELPPVLC
SDFPHLVLQKILVSLSMKNCRASMIFFQNDAKCEQHVQGKEENNFSDVEELYLQTTFDEM
DIFTNFAANIADKNVTGSRLAINQNLRETLENCLLAMSEKLLSTCGPTSKVVTAEHLVRC
VSLLVGVLGCYCYTGTFKEEDACKSVLFQNAKSLIHYAGESISQSKNKLNEDTHIHTLRT
LIMQCTKCLCNCTKNSANKMLSNIFLRLLTSKFMNDLIDICKNLMTVTGKPSVLGKMDLR
NDPEESIMEVDNLASDDLFDDHSVTDVSDTNESGDTQTVTGALSPLAEEQLTKQDLLLLE
IVRFLCISVTTVQVQTLSFRASDIRRRLLMLTESSVFDSAKPLHLHMYLILLKELPAEEH
LLPAVDVDMLLKPLSTVCSLHRRDQEVCKVILNNLLPIAVGLAQFDEHAAEEAGTAKGQF
LTVVEAFWHLSQGGKCTASVRVALLNCMKALLEVDPHCKWAILHVKNKDLPVSDAFPHFL
ADSHHQVRILAAKSIISLFQDVKQRDSSGMSRPLPLKLQQKAFENAYLRVQEGMSNLVRG
DTSPEDLLDKQSNGKAVLLMLITMVLCCSPVCEKQALFAICQSVKENGLEPHLVKKVLKK
VSDIFGYKSIEDFMTSHLDYLVMEWLKINDSGYSLSAFPYVLLNYTSLEEFYRSCYKVLV
PHLVIRNQFEDVKTLANKIGKDWRQVLADCFPKLLVNILPYFAYQSHGKSEVAEQREMAS
KVYDMLKDENCLGKQQMDNLSHSNLPEIVVELLMTLHEPAGTTVEEGSHLSKYIRELDPA
PNPPHFPSYVIKATLDYISNCHKSKLKSIVAVLSKSPDSFQKILLALCKHVSDAKNMYKK
HRVLTIYHLFVGLLLKEIKDSLGGAWAFVLRDVIYTLIHHINSRPIIVRDISVRSFSLCC
DLLQHVCHTAVTCCSDALETHLHVIVGTLIPLAMDQSQVQEQVLGLLKYLVIDNKDNESL
YQAIKCLDPFPEYPPFKDLRATQQKIKYSKGPYSLLEEINHFLSVGVCDSLPLTRLEGLY
DLRKKLEQYKDQMKDLLKIFQEKPEDSAVVKLVVSLLQLSKMAVNHTGEKAVLEAVGSCL
GEIGPMDFSTTALQRAENALDSRAADLLEDRKLQCVFIMLIQINTALTDNCIDVRAAAVS
CLKNILATKSGNEFWEVYKSKADPMLIYLQPFRTSRKKFLEVSANDTEAPLEKLDDTNLW
IPLGESHETWIKHLTSSILDSGGVKNEVLQLMKPLCEVKTDLCQTLLPYLIHDILLHDSD
ESWRNLLSLHIQKFFTACCKFASSNRSTPNLDSEQETHNFRSLDKVSRRAMLAVVDYLRR
QKRSVSGTVFDDSFWLDLNYLEVAIAAQSCAAHFTALLYAEIYADKINRDKQQQERSSFK
AAKSLTFEEESQGTPISTLNEKSKEETGLSLQDLLMDIYRSIGEPDSLYGCGGGRMLQPL
ARIRTYEHEAVWEKALVTYDLETSLSPSTRQAGIIEALQNFGLCHTLSMYLKGLEHENTE
WCAELQEIRYQAAWRNMQWSHISSVKDEAGSPGYHESLYDALQSLRDKEFSAFHDSLKDA
RVNEVEELCKGSLESVYSLYPTLCRLQLIGELENAGLLFSRSVTTQQLNDVYLKWQRQSQ
LLKDSDFHFQEPVMALRTVILEILLEKESENTKRECIKDLLTKHLVELSRLARTAKNTQL
PERAMFQIKQHNPNGNGVSEWQLEEAQVFWAKKEESLALNILKTMIKKLDADWFQVEKDP
HLKLMYTECLRLCGSWLAETCLENPTVIMQKYLEKAVEIAASHSGDSSDELKKGKMKAFL
SLARFSDNQYQRIENYMKSSEFENKQALLKKAKEEVGLIRERRVQTNRYTVKVQRELELD
EGAIQALTEDRKRFLCKAVENYISCLLSGEEHDMWIFRLCSLWLENSGVDRVNEMMTKNA
QKIPSYKFLPLMYQLAARMGTKMMGGLGFHEVLNNLMSRISLDHPHHTLFIILALANANK
DELLTKPDAIRRIKLTKNAPKEISQLDVDRMEAARTIMNIVRKRRPAMVRDIEALCDAYI
ILANLDSTPWKSQKNGIRIPADQPIIKLKNLEDVAVPTMEIKVDPTGQYENLVTISSFKQ
EFRLAGGMNLPKIIDCVGSDGKERRQLVKGRDDLRQDAVMQQVFQMCNTLLQQNTETRKR
KLNIRRYKVVPLSQRSGVLEWCAGTTPIGEFLVNAEEGAHKRYRPQDYSSYQCHKIMLDA
QKKHSEEKYRIFMEICERFQPVFRYFCMEKFLDPAVWFEKRLAYTRSVATSSIVGYILGL
GDRHVQNILIDEQTAELVHIDLGVAFEQGKILPTPETVPFRLTRDIVDGMGITGVEGVFR
RCCEKTMAVMRNSQEALLTIVEVLLYDPLFDWTMNPLKALYLQQRPEDEADMSSTLGTDP
QEPKRKASDDQSFNKVAERVLMRLQEKLKGVEEGTVLSVGGQVNLLIQQAMDPKNLSRLF
PGWKPWV
NT seq
9204 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgcattacacgatctgctcaactgttgtcgtcgccttgaaaatgagaaagct
gtggaacgaaggaaggaaattgaaaatttcaagcgacttctccgtgattctgaaatagtt
ctccaactggaccggaattctgattctaaaccaggaaagcaactcaactgggatgctgta
tttcgtgttttgcagaaatacttccagaaagaacttaaaaacctgcagcagacaaaacca
aatgcatcagcttcaacccaaactaccagacagaaaaagatacaagaatttggaagcttg
gttaaatatttcatcagatgtgctaataaacggggacccaggctgaaatgtcaggaactt
ctgatttatgtcatggaagttataagagatccaacaagttgtgctgcttatggttctgac
tgtagtagtatactcctaaaggatatcctctcagtaaggaaatactggtgtgagatatcc
cagcagcaatggtcagagttgctgaccctgtatggccatttatacctcaaaccttctggg
agcattaatagagtcttagtggctaggataattcacacacttacaagagggtactgcttc
caaactgatgggttgagttctgacatgcttgtcttcttttcaaaggcaatgcagtctgca
aggcaggagaagaatgctgcaggcctggatcatattgttggagcaatgaatatcttctgc
aacaagtttgcagacaactgtcgcatacagatgtgcaaagtaggagaagaaattctgcct
acagtgctttacatttggactcagtacagaccaaaggattccctgaaagaatcaataatt
gagttatttcgtctccaagttcatattcatcatccaaagggtgcaaaaactcagggaaga
ggtgcttgtgacttaacgaagtggcaaagcatcttacataacctgtatgatctgctggtg
aatgaaataaatctcatcaataccagagggaagtattcttcaggctcacgtaatattgct
gtaaaggaaaatttaattgagttaatggctgatatttgtcatcaggtctttacagagggt
accaaaatccttgaaattacccagtcttatgctgtttcacaaagagagtcctgtgaggac
atggcgccaaacaagcgcaggaagattgagctgagctggggggtcattcgagacaacctg
caaagatcccagaaggattttgatgtcataccttggttacaggttacaagtcagctaata
tccaagtatcccatgagtcttcctaacagtgagctgcctgccttactgaatgtccttcac
cagttactgcctcagcagcgccgaggagaaaggaccccgtacgtgctgaagtgtctcaca
gaggtggctttatgtcaaagtcagaaaactgatttgaaaagcacccagaagttagagctc
cagagaacttgggcaaagatctggactcttaccattcgcagtgtaagccttcagcaaatt
gaagcggagagctttgggctgcttggagctatgattcaagggaaccttgttgtaacagat
aaagagctttggaagatattttcaggacctgcatgcaaaccttcaagttctgctgcatgt
tgtttgtcattagtgatgtctgcctattcagtgccagaaaatttggacctaggaatggaa
cagaatagttctgaaagaaatctgggttctgtgttaagggaggcaataatgaaatggctc
ctgtccagctgtttggaggaagaaatagaagaatgtgcagagttgcctcctgtgctctgc
agtgattttcctcatcttgtattacaaaaaattcttgtgagcctttcaatgaagaactgc
agagcttccatgatctttttccaaaacgatgctaaatgtgagcaacatgtgcaagggaaa
gaagaaaacaatttttctgatgttgaagagctgtacctgcagactacatttgatgaaatg
gatattttcactaactttgcagcaaatattgcagataaaaatgtgactggttcaagactt
gccatcaaccaaaatcttagggaaacactggagaactgccttttagcaatgtcagaaaag
cttttaagcacttgcggccctacgtctaaggttgttactgctgagcaccttgtccgatgt
gtcagtctcttggttggtgttctgggttgctattgctacactggtacttttaaagaggaa
gatgcctgtaagtcagtattgttccagaatgctaagtctctcattcattatgccggcgaa
agcatttcccagtctaaaaacaagctaaatgaagatacccatatccacacactgaggact
ttgataatgcagtgtacaaaatgtttgtgcaattgtaccaagaacagtgctaataagatg
ctgtctaatatattcctgcgtttgttaacttcaaaatttatgaacgatctgatagatatt
tgcaagaatctgatgacagttactggaaagccaagtgtactgggaaaaatggatctgagg
aatgatcctgaggagagtataatggaagtagataacctggcatctgatgatttgtttgat
gatcattcagtgactgacgtcagtgatacaaatgaatctggtgacacgcaaactgtaaca
ggtgctttgagcccattagctgaagaacagttgacaaaacaggatttacttctccttgaa
attgtgaggttcttatgtattagtgtaactacagtccaagttcagacactgagcttccga
gcttctgatattaggaggaggctgttaatgctgactgaaagcagcgtctttgacagcgct
aagccactgcatctgcacatgtacttgatcctgttgaaggagctccctgctgaagaacac
ctcttgcctgcagttgatgttgatatgctacttaagcctctttctactgtgtgttctctg
catcgtcgagatcaagaagtttgtaaagtaatcctaaataatttgctccctatagcagta
gggttggcccagttcgatgaacatgctgctgaagaggcagggactgccaaaggacagttt
ttgacagttgtcgaagccttttggcatttatctcaaggagggaaatgcacagcatcagta
agagtggcccttttaaattgcatgaaagccctacttgaggttgatcctcattgcaagtgg
gcaatccttcatgtgaaaaataaagatctacctgtgagtgatgctttcccacatttcctt
gcagacagtcaccatcaagttcgcattcttgctgcaaagtcaattatcagtttgtttcaa
gatgtgaaacagagagattcttctggaatgtcaagacctcttcccctgaagctccagcaa
aaggcttttgagaatgcatacctcagagttcaggaaggaatgagcaatctggtcaggggt
gatacaagtcctgaagatcttttggacaaacagagtaatggaaaagcagttttgctgatg
cttataaccatggttctgtgctgcagcccagtgtgtgaaaagcaagctctgtttgctatt
tgccagtctgtgaaagagaatggattagaacctcatctagtgaagaaggttttgaaaaaa
gtgtctgacatttttggctataaaagtatagaagacttcatgacatcacatttagactac
ttggtgatggagtggctgaaaataaatgacagtggatatagcctgtctgctttcccttat
gttcttctgaactatactagccttgaggaattttacaggtcttgttacaaagttttggtt
ccacacctggtgattagaaatcagtttgaagatgtgaaaacacttgccaacaagattgga
aaagactggagacaagttctggcagactgttttccaaagttacttgtcaatatcctcccg
tactttgcctatcaaagccatggaaagagtgaagtagcagagcaaagagaaatggcttct
aaagtctatgacatgcttaaggatgaaaactgcttaggaaaacagcaaatggacaattta
tctcatagtaacttgccagagattgtggttgaactgttgatgaccttacatgaaccagct
ggtaccacagtggaagaagggtctcatctaagtaaatatataagggaactggatcctgct
cctaatcctcctcattttccatcttacgtgattaaggcaaccttggactatattagcaac
tgtcataaaagcaaattaaaaagtattgtagcagttctttctaaaagccctgattcattc
cagaaaatccttctagctctttgtaagcatgtatcagatgcaaaaaacatgtataagaaa
cacagagttcttacaatctatcacttgtttgttggtctgttacttaaagagatcaaagac
agtttaggaggagcctgggcttttgtccttcgagatgtaatttacaccctgattcaccac
atcaatagcagacccatcatagtcagagacatatcggtgcgcagcttttccctctgctgt
gatcttcttcagcatgtgtgccacacagcagttacatgttgcagcgatgctctggagacc
caccttcatgttattgtgggaaccctgatccctcttgccatggaccagtctcaggttcag
gaacaggtcctaggcttgttgaagtacctggtgatagataataaggataatgaaagcctg
taccaagccatcaagtgcttagatccttttcctgaatacccaccttttaaagatttgcga
gcaactcaacagaaaataaaatacagtaaaggaccatattctcttttggaggaaattaat
cactttctttcggttggggtttgtgattcactgcccttaacacggcttgaaggactgtat
gatttacgcaaaaagctggagcaatataaagatcagatgaaggatctcctgaaaattttc
caggaaaagccagaagattctgcagtagtgaaactggtggtgagcttattgcagctgtcc
aagatggcagtaaaccacacaggagaaaaagcagtgctggaggctgttggaagttgcttg
ggagaaataggtcccatggatttctccaccacagctcttcagcgtgctgaaaatgcactg
gattctagagcagcagacttacttgaagatagaaaacttcagtgtgtcttcataatgtta
attcaaataaacactgctttgacagataattgtattgatgttagagctgctgctgtttcc
tgtttgaaaaacatactagccaccaagtctggcaatgaattttgggaagtttataaaagt
aaagctgatcccatgttaatctacctacaacctttcagaacatctaggaaaaagtttctt
gaagtatctgctaatgatacagaggctcctttagaaaaattagacgacacaaacctgtgg
attcctctgggagaaagtcatgagacctggatcaagcacctaactagttcaatactggac
agtggaggtgtgaaaaatgaagttctccagttaatgaagccactgtgtgaggtgaaaaca
gacttgtgtcaaactctgcttccatacctgattcatgatatccttcttcatgactcagat
gaatcttggcgaaatcttttgtcacttcacatccagaagttttttacagcctgttgcaaa
tttgcctcatctaatagatctactccaaatcttgattcagagcaagaaacccataatttt
agaagtttggataaagtgtctcgacgagccatgcttgctgttgttgattacttgagaaga
caaaagagatctgtttcaggtacagtttttgacgacagcttttggctagatctgaattat
ctggaggttgctatagcagcacagtcttgtgctgctcatttcacagccttgctctacgca
gaaatctacgcagacaagataaatagggacaagcagcagcaagaaagatcttcttttaaa
gcagctaagagtttgacatttgaagaggaaagtcaaggaacacctatttctactttgaat
gaaaaaagtaaagaagaaactggcctaagtttacaggaccttctcatggacatctataga
agcattggagaacctgacagtctttatggctgtggtggaggaagaatgttacagccattg
gcacggataagaacatatgagcatgaagcagtatgggagaaagcccttgttacatatgac
ctcgagacaagcctctctccatccactcgccaggcaggaataatagaggctttgcagaat
tttgggctttgccacactctttccatgtacttaaaaggactggaacatgaaaacactgag
tggtgtgcagaactccaggaaatacgctaccaggcagcatggaggaatatgcagtggagc
cacatctcttctgtcaaagatgaagcaggaagtccagggtaccatgagtcattgtatgat
gctcttcagtcgttacgggataaggaattctctgctttccatgacagtcttaaagatgcc
agagtgaatgaagtagaagagctgtgcaagggcagtcttgagtctgtttattcgttatat
ccaaccctttgcagactacagctaattggagagttggaaaatgcaggtctactgttctcc
agatctgttactactcaacaattgaatgacgtttatttgaaatggcagagacagtcccag
cttctcaaggacagtgacttccatttccaggaacctgtcatggctctgcgcactgtaatt
ttggaaatcttgcttgaaaaggagagtgaaaataccaaaagagaatgtattaaagacctc
ctcaccaaacatctagtggagctctctagattggcaagaactgctaaaaatactcagctt
ccagaaagagctatgtttcaaatcaaacaacacaatccaaatggaaatggagtttctgaa
tggcaacttgaagaggctcaggttttctgggctaaaaaggaagagagtcttgcactaaat
atacttaaaacgatgattaaaaaattagatgcagattggtttcaggttgagaaagatcct
cacctgaaattgatgtatacagagtgcctgaggctctgtggaagctggttagcagaaaca
tgcttggagaatcctacagtcatcatgcagaaatacttagaaaaggctgtggaaattgct
gcaagccacagtggagacagcagtgatgagctgaagaaaggaaagatgaaggctttcctc
tccttggctcgtttctctgataatcagtaccagcgaattgagaattacatgaaatcctca
gagtttgaaaataagcaggcactgctgaagaaggccaaggaggaggtcggtctcatcagg
gagcgtcgagttcagaccaacagatacacagtgaaagttcagcgagaacttgagctggat
gaaggggcaatacaagccctgaccgaggatcgtaaacgcttcttgtgtaaagcagtggag
aactacatcagctgtttactaagtggagaagaacatgatatgtggatattccggctctgt
tccctatggcttgaaaattctggagttgatagagtcaatgaaatgatgacgaaaaatgca
cagaagatcccttcatacaagttcttgcctctgatgtaccagctggctgctcggatggga
actaagatgatgggtggtttaggatttcacgaagttctgaataatctaatgtctcgaatt
tcactggatcatccacatcatactttgtttataatattagctttggctaatgctaacaaa
gatgaactcctcacaaaaccagatgcaataagaagaattaagttaactaaaaatgcaccg
aaagagatctcccagcttgatgtggacagaatggaagctgctagaactataatgaatatc
gtgaggaaaagaagacctgctatggttagggacatcgaagcactttgtgatgcttacatc
atattagcaaatttagattctactccatggaaatctcaaaaaaacggaataaggattcca
gctgaccagccaattattaaactgaaaaacttggaggatgttgctgttcctaccatggaa
attaaggtggatcccacaggacaatatgaaaatttggtcacaataagttctttcaagcaa
gaatttcgtttagcaggaggcatgaatctgcctaaaataatagattgtgtaggatcagat
ggtaaagaaaggaggcagctggttaaggggcgtgatgacctgagacaagacgctgtcatg
cagcaagttttccagatgtgcaatacattgctccagcaaaacactgaaacacgaaagagg
aaattaaatatccgaagatacaaggtggttcccctttcccagagaagtggagttctggag
tggtgtgcaggaacaactcccataggagaattccttgtgaatgctgaagaaggagctcac
aagagatacaggccacaagattactccagctatcagtgtcataaaataatgctggatgcc
caaaagaaacattctgaagagaaatacagaattttcatggaaatctgtgagcgttttcaa
cctgtgttccggtatttctgcatggagaaattccttgacccagctgtgtggtttgaaaaa
cggttggcatacactcgcagtgtggctacatcttctatagttggctacattcttggactt
ggagacagacatgttcagaatatcttgatagatgagcaaacagcagaactggtacatata
gatctgggggttgcttttgagcaaggtaaaatccttcccacaccagagactgttccattc
aggttaaccagggacattgtggatggaatgggtatcaccggcgtggaaggggtcttcaga
agatgctgtgagaaaacaatggctgttatgagaaattctcaagaagctttgttgactatt
gtagaggtgctgctttatgatcctcttttcgactggaccatgaaccccttgaaagctttg
tatttgcagcagaggccagaggatgaggctgacatgagctctacacttggtactgatcca
caagaacctaaaagaaaagccagtgatgaccagagttttaacaaggtggctgagcgtgtt
ctgatgagacttcaggagaagctgaaaggtgttgaggagggaacagtgctcagtgtggga
gggcaggtgaacctcctcatacagcaggccatggacccgaaaaatctgagccgtctcttt
cccggatggaaaccctgggtgtga
DBGET
integrated database retrieval system
