Sturnus vulgaris (common starling): 106854385
Help
Entry
106854385 CDS
T08833
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
svg
Sturnus vulgaris (common starling)
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
svg00536
]
106854385 (COL25A1)
Glycosaminoglycan binding proteins [BR:
svg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106854385 (COL25A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
106854385
NCBI-ProteinID:
XP_014733782
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MGGGGKEIKAAAAEGCASTLGKSRGAAGQDSSGKPGGLEKPGLGKLGCGGDRCPRRAGPV
GFALAALLSALAAASCVYLGVRTSDLQARVAAIEGARGGFSAAAPPLPGFSLEQLNAMMQ
EKVERLLAQKSYEHFAKIRVAREAAPECNCPPGPPGKRGKRGRRGETGPPGQPGPQGPPG
PKGEKGDQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPG
DTGKDGPRGMPGLTGEPGKPGEQGLTGPQGPPGQKGSVGVPGVPGRDGQVGEPGLPGIAG
EKGEAGLKGDPGERGEKGDAGENGLKGDTGKKGDPGSSAAGIKGEPGEAGRPGQKGEPGL
PGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGDRGEAGPVGKGERGEPGIPGPKGKTGEP
GSRGPKGSKGDTGERGDTGSAGPRGPPGQKGDQGATEIIDYNGNIHEALQRIATLTVTGP
PGPPGPQGLQGSKGEPGSPGTPGVDGEQGPKGSKGDTGDPGMPGEKGGIGLPGLPGANGV
KGEKGDVGLPGAQGPSMIGPPGPPGPHGPPGPMGPHGLPGPKGASGLDGKPGARGIDGPV
GPHGPAGPKGERGEKGTVGDPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDIGEKGEKGFR
GIKGEKGEPGQPGLDGLDAPCQLGPDGLPMPGCWQK
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggggggcggaggaaaggaaatcaaagctgccgcagctgaagggtgtgcgagcacgctg
gggaagagccgaggagccgcaggacaggatagcagcgggaagcccggcggcctcgagaag
cccggcctcgggaagctcggctgcggcggggaccgctgcccgcggcgggccgggccggtc
ggcttcgcgctggccgcgctcctctcggcgctggccgcggcctcctgcgtctacctgggc
gtgcggaccagcgacctccaggccagggtcgcggccatcgaaggcgcccgagggggcttc
tctgccgccgccccgccgctgcccggcttttccttggagcagctgaacgcgatgatgcag
gagaaagtggagcgacttctcgcccagaaatcctacgagcacttcgcaaaaatacgagta
gcgagagaagcggctccagagtgcaactgcccaccaggtcctccagggaaaagaggtaag
cggggaagaagaggagagaccggacctcctggtcagcctggtcctcaaggccctcctggt
ccaaaaggcgagaagggagatcaaggtgatcagggccctcggatggtgtttcctaaaatc
aatcatgggtttctctctgctgatcagcagctcattaaacgccgcctcattaagggggac
caaggacaagctggaccccctggacctccagggccaccaggacccagaggtcccccagga
gatactggcaaagatggtcctcgtgggatgcctggcttaacgggtgagccaggaaaacca
ggagaacaaggattgacaggacctcaagggcctccaggacaaaagggttctgtcggagtg
cctggtgttccagggagagatggacaagtgggtgaacctggcttgcctggcatagcagga
gagaagggagaagcagggctcaagggtgaccctggagaaagaggagaaaagggagatgct
ggcgagaatggactgaagggcgacacaggaaaaaagggtgaccctggctcttctgcggct
ggaattaagggtgaacctggtgaagctggacggcctggacaaaagggtgaaccaggcctt
cctgggcttcctggactccctggaataaagggtgaaccaggtttcattggtccacaggga
gaacctgggttgccagggctaccaggaacaaagggtgacagaggagaggcaggccctgtt
gggaagggtgagagaggtgaacctggaatccctggaccaaaggggaaaacaggtgaacct
ggatctagaggccctaaagggtcaaagggtgatacaggtgagagaggtgacacagggtct
gcaggtccacggggaccacctggacagaagggcgaccaaggtgcaacagagataattgat
tataatggcaatatccacgaagctctgcagaggattgccaccctgactgtcacgggacca
ccaggaccaccaggaccccaaggactgcaagggtcaaagggtgagccaggatccccagga
actccaggagttgatggagagcagggtcctaagggctcaaaaggagacacaggtgatcct
ggaatgcctggagaaaaagggggaattggactgcctggcctaccaggagccaatggtgtg
aaaggcgaaaaaggagatgttggtttgcctggtgcccaaggtccttcaatgataggacca
cctggaccaccggggccacatggtcctccaggccctatgggacctcatggactacctggc
ccaaagggagcatctggcttagacggaaagccaggagcccggggtatagatggcccagtt
ggtccccatggccctgcaggtcccaaaggagagagaggtgagaagggaactgtaggtgac
cctggacccagaggaccatatggcttgcctggcaaggacggcgagcctggccttgatggt
ttccctggtcctcgaggagaaaagggtgatataggagaaaagggagaaaagggtttccgt
ggaattaagggggaaaagggggagccaggccagcctggcctggatgggctggatgcccct
tgccaattgggtcccgatggattaccaatgcctggctgttggcaaaagtga
DBGET
integrated database retrieval system