Sturnus vulgaris (common starling): 106854539
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Entry
106854539 CDS
T08833
Symbol
SH3RF1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
svg
Sturnus vulgaris (common starling)
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
svg01009
]
106854539 (SH3RF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svg04121
]
106854539 (SH3RF1)
Enzymes [BR:
svg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106854539 (SH3RF1)
Protein phosphatases and associated proteins [BR:
svg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106854539 (SH3RF1)
Ubiquitin system [BR:
svg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106854539 (SH3RF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-RING_4
zf-C3HC4_4
zf-RING_11
Prok-RING_4
zf-Nse
Coilin_N
zf-MIZ
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
106854539
NCBI-ProteinID:
XP_014734035
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVSSRNELRCPECRTLVDCGV
DELPSNILLVRLLDGIKQRPRKPGGGTAGTNALRVPTNSVANCGSKDLQSSQVGQQQRVQ
ARSPPVRGVPQLPCAKALYNYEGKEPGDLKFSKGDIIILRRQVDENWYHGEVNGIHGFFP
TNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFAKDDVLTVIRRVDENWAEGMLAD
KIGIFPISYVEFNTAAKQLIELDKPSGSAVDSGEGTSGAAHNNSTQKHTDTKKNTKKRHS
FTSLTMSNKASQSSQNRHSMEISPPVLISSSNPTAAARISELTGLSCSAPSQVHIGTTGL
IVTPPPSSPVTTGPSFTFPSEVTYQGALGNINPPLPPPPLLPAAIIASATSGPQSTSVIQ
RSASGSTEQVAHLRPQARPSVYIAIYPYTPRKEDELELRKGEMFLVFERCQDGWFKGTSM
HTSKIGVFPGNYVAPVTRTVTSASQTKVPMSTAGQTGRVVTMVSPSTASGTSQKLQGNGV
AVNSSAVPTAVVSAAHVQTSPQTKVLMHVTGQMTVNQARNAVRTVASHSQERPTAAVTPI
QAQSPTCLIPAAMIIPHHSVASQQPQLPNTAAYVTAVNVNRSTIPLACNSNIAASSLEGD
ISGKTTNTHPGAPASPESALTAGGNAAVSKTDKDGKKEKKGLLKLLSGASTKRKPRLSPP
ASPTLEAEQAAAELALQGAVGPELPSAGTHSKAGSCPTDSEASGLAQETLHRKATSLDSS
IPIAPPPRQPCSSLGPVLNESRPLVCERYRVVVSYPPQSEAELELKEGDIVFVHKKREDG
WFKGTLQRNGKTGLFPGSFVENI
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatcggctttgctggatctgttggagtgtcctgtttgcttagaacgccttgat
gcttctgcaaaagtcctgccttgccagcacacgttttgtaaacgctgcctgctgggcatt
gtgagctctcgcaatgagctgcgatgtcccgagtgccggactttagtggactgcggtgtt
gacgaactccccagtaatattttgctcgttagactactggatggcatcaaacagaggcct
cgaaaacccggcggtgggactgctggcacaaacgctttaagggtccccaccaacagtgta
gctaattgcggatcaaaggacctgcagagctcacaggttggacagcagcaaagggtgcaa
gcacggagccctcctgttaggggtgtacctcagttaccatgtgccaaagcattgtataac
tacgagggaaaagaacctggagatcttaaattcagtaaaggagacatcatcattttacgt
cgacaggtggatgaaaattggtatcatggagaagtcaatggcatccatggcttttttcct
accaattttgttcagattattaagcctttacctcaacctccgcctcagtgcaaagcactt
tatgattttgaagtaaaagacaaggaagcagataaagactgtttaccatttgcaaaggat
gatgttctgactgtaattcgccgtgtggatgaaaactgggcagaaggaatgctggctgac
aagataggaatatttccaatttcatatgttgagtttaacacagcagccaaacagctgata
gaattggacaagccctcaggttctgctgttgactctggagaaggtacctctggggcagcc
cacaacaattcaacccaaaagcacaccgatactaagaaaaacaccaaaaaacgacactct
tttacctccctcaccatgtccaacaaggcttcacagtcttctcagaatcgccactccatg
gaaatcagtcctcctgtcctcatcagctccagcaacccaacagcagcagcccgcatcagt
gagctgacgggactgtcctgtagtgccccttctcaggttcatattggcactacagggctg
attgtgactccaccccccagcagcccagtcacaacagggccttccttcaccttcccctca
gaagttacctaccaaggtgctcttggtaatattaatcccccacttccgccaccacctctc
ttgcctgctgcaatcattgcttcggccacttctggacctcagtctacaagtgtcatacaa
aggtctgcatcaggatcaactgaacaagtggcacatttacgaccacaagctcgtccaagt
gtgtatattgctatctacccctacactcctcgaaaagaagatgaactggaactgcggaaa
ggagaaatgttcctagtgtttgagcgctgccaagatggctggttcaagggaacttccatg
catacaagcaagattggtgtttttcctggaaattatgttgctccagttacaaggacggtg
acaagtgcatcacaaacaaaggttcccatgtctactgctggccaaacaggacgagtggtg
accatggtcagcccttccactgctagtggaacatcccagaagctccaggggaatggtgtg
gcagtgaactccagtgcagtacccacagcagtggtttctgcagcacatgtccaaaccagt
ccgcaaaccaaggtccttatgcacgtgacaggacaaatgacagtcaaccaggctcgaaat
gcagttagaacagttgcctcacatagccaagaaagacctacggcagcagtcacacccata
caagcacaaagtccaacatgccttattcctgcagctatgatcatcccccaccactctgtt
gcctcccagcagccccagcttccaaatactgctgcttatgtcacagctgtgaatgtgaac
cgctcaaccatcccactggcatgtaattctaacattgctgcttcatctttggagggagat
atcagtggaaaaacgacaaacactcaccctggagctcctgcatctccagagagtgcttta
acagctggtggaaatgctgctgtcagtaaaacagataaggatggcaagaaagaaaagaaa
ggtttgctgaaactactttctggagcatctactaaacgcaagcctcgactgtcaccccca
gcgtcacccaccctggaggcggagcaggctgcggcagagctggccctgcaaggtgcagtg
gggccagagcttccatcagcaggcactcacagcaaggctggctcctgtcccaccgacagc
gaggcctctgggctggcacaggagacactgcatcggaaagccacgtccctggattcctct
attcccatagccccgccacctcggcagccttgctcatcgctggggccggtcctcaatgaa
tccaggcctcttgtgtgtgaaaggtacagggttgtggtatcctatcctcctcagagcgaa
gcagaacttgaacttaaggaaggtgacattgtttttgtacacaaaaaacgtgaggatggc
tggttcaaaggcactctgcaacgaaatggaaagactggccttttccctggcagctttgta
gagaacatttga
DBGET
integrated database retrieval system
