Sturnus vulgaris (common starling): 106854783
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Entry
106854783 CDS
T08833
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106854783 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svg03019
]
106854783 (CLP1)
Enzymes [BR:
svg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
106854783 (CLP1)
Messenger RNA biogenesis [BR:
svg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
106854783 (CLP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
AAA_18
ATP_bind_1
TniB
AAA_22
AAA_16
nSTAND3
MMR_HSR1
CbiA
PduV-EutP
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
106854783
NCBI-ProteinID:
XP_014734371
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MADDGGEEKKQVAKFELERETELRFEVEAAQTVQLELLTGMAEVFGTELTRNKKFTFDAG
AKVAVFTWHGCTVQLSGRTEVAYVSRDTPMLLYLNTHTALEQMRRQAEREDERGPRVMVV
GPTDVGKTTVCRLLLNYAVRLGRRPTFVELDVGQGSVSIPGTMGALYIERPADVEEGFSL
QAPLVYHFGSTTPGTNIKLYNKITSCLADVFNQRCEVNRRASVSGCVINTCGWVKSSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDER
IREYFYGFRGCFYPHAFDVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTADSPDDNISETSVAGFIVVTGVDLERQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgatggcggcgaggagaagaagcaggtggccaagttcgaactggagcgggag
acggagctgcggttcgaggtggaggcggcgcagacagtgcagctggagctgctgaccggc
atggccgaggtattcggcaccgagctcacccgcaacaagaagttcacgttcgacgcgggc
gccaaggtggccgtgttcacgtggcacggctgtaccgtgcagctcagcggccgcaccgag
gtggcctacgtgtcgcgggacacgccaatgctgctgtacctgaacacgcacacggcactg
gagcagatgcggcgccaggccgagcgggaggacgagcgcgggccccgcgtcatggtggtg
gggcccaccgacgtgggcaagaccactgtgtgccgcctgctgctcaactacgccgtgcgc
ctgggccgccggcccaccttcgtggagctggacgtggggcagggctcggtgtccatcccc
ggcaccatgggcgcgctgtacatcgagcgtccggccgacgtggaggagggcttctccctg
caggcccccctcgtctaccacttcggctccaccacgcccggcaccaacatcaagctctac
aacaagatcacgtcgtgcctggccgatgtcttcaaccagcggtgcgaggtgaaccggcgg
gcatcggtgagcggctgcgtcatcaacacctgtggctgggtcaagagctcgggctaccag
gcgctggtgcacgccgcctccgccttcgaggtggacgtggtggtggtgctggaccaggag
cgcctctacaatgagctcaagcgggacctgccccactttgtgcgcaccgtgctgctgccc
aagtctggcggcgtggtggagcgctccaaggacttccgccgggaatgccgtgacgagcgc
atccgcgagtatttctacggcttccgcggctgcttctatccccacgccttcgacgtcaag
ttctctgacgtcaagatctacaaggtgggcgcgcccaccatcccagactcgtgcctgccg
ctgggaatgtcacaggaggacaaccagctgaagctggtgccagtgacaccggggagggac
atggtgcaccacctgctgagtgtcagcactgccgacagccccgacgacaacatctccgag
accagcgtggccggtttcatcgtggtcaccggagtggacctggaacgccaggtcttcacc
gtgctgtccccggctccacgccccctccccaagaacttcctactcatcatggacattcgc
ttcatggacctcaagtag
DBGET
integrated database retrieval system
