Sturnus vulgaris (common starling): 106855012 Help Entry 106855012         CDS       T08833                                  Symbol CDC40 Name (RefSeq) pre-mRNA-processing factor 17   KO K12816   pre-mRNA-processing factor 17 Organism svg  Sturnus vulgaris (common starling) Pathway svg03040   Spliceosome Brite KEGG Orthology (KO) [BR:svg00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     106855012 (CDC40)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:svg03041]     106855012 (CDC40) Spliceosome [BR:svg03041]  Complex C   Other components    Step II factors     106855012 (CDC40) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WDR55 EIF3I WD40_WDHD1_1st WD40_CDC20-Fz WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_RFWD3 ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_IFT122_1st Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_VPS8 Beta-prop_ACSF4 Beta-prop_NWD2_C WD_LRWD1 Beta-prop_Vps41 PQQ_2 Motif Other DBs NCBI-GeneID:  106855012 NCBI-ProteinID:  XP_014734783 LinkDB All DBs Position Unknown AA seq 581 aa AA seqDB search MSAAIAALASYGDSDSEPDSEPETEGGSQRSAAVLASRDAVLHLRAPPAAPPVLPVDAAP EVAVKEDVETGVHLDPAIKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPA HINDFMFEQQRRTFATYGYALDPSVDNPEAATKYIGSVEEAEKNQGLTVFETGQRKIEKR KKFKENDASNIDGFLGPWAKYVDEKEVAKPSEEEQKELDEITAKRQKRGKVEDDKPGEEK TILHVKEMYDYQGRSYLHVPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFP LSGHILLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNNAGTQFLSAAYDRYLKL WDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHL GAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLAC QSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDADGKLNIWDWK TTKLYSRLKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD NT seq 1746 nt NT seq  +upstreamnt  +downstreamnt atgtcggcggcgattgccgcactcgcctcctacggcgactccgactcggagcccgactcg gagcccgagaccgagggcggttctcagcgctctgccgccgtgctcgccagccgcgatgcc gtgctgcacctccgggcgcctcccgccgcgcccccggtcctgcccgtcgatgcggccccg gaagtagccgtgaaggaagatgtggaaacaggagtccaccttgatcctgctatcaaggaa gttcaatacaatcccacttatgaaaccatgtttgcacctgagtttggaccagaaaatcca tttaggactcagcaaatggctgcacctagaaacatgctttctggatatgcagaaccagct cacatcaatgatttcatgtttgaacaacaaaggagaacatttgcaacctatggttatgca ttagatccctctgtagataaccctgaagctgctaccaaatatattggttctgtagaagaa gctgaaaaaaatcaaggtttaacagtgtttgaaacaggacaaaggaaaattgaaaaaagg aagaaattcaaggagaatgatgcatctaatattgatggttttctgggaccatgggcaaag tatgttgatgaaaaagaagtagccaaaccatcagaagaagagcagaaggaattggatgaa ataacagctaagaggcagaagagaggaaaagtggaagatgataaacctggagaggaaaag actatattacatgttaaagaaatgtatgactatcaggggagatcttatcttcatgtccct caagatgttggagttaatctccgttctacagtaccacctgagaagtgctatcttccaaag aaacaaatccatgtgtggtcagggcatacaaagggtgtcagtgcagtcagattgtttcct ctgtctgggcatatactcttatcttgctctatggattgcaaaattaagctatgggaagta tatggtgatcgaagatgtctacgaacatttattggacacagtaaagctgttcgagacatc tgttttaacaatgcaggcactcagttccttagtgctgcatatgaccgctatctaaaactc tgggacactgaaacaggtcaatgtatttcaagattcaccaacaggaaggttccttattgt gtcaaattcaaccctgatgaagataaacaaaatctctttgttgcagggatgtcagataag aaaattgtgcagtgggatattcgaagtggtgagattgtgcaggaatatgataggcatttg ggagctgtcaacaccattgtgtttgtggatgaaaatagaaggtttgtgagtacatctgat gacaagagtttaagagtctgggaatgggacattcctgtagacttcaagtacatagctgag ccaagtatgcattccatgccagccgtgactttgtctccaaatgggaaatggttggcttgc cagtcgatggataatcaaatcttgatttttggagctcagaacagattcagattaaacaaa aagaaaattttcaaaggtcacatggtagctggctatgcttgtcaagtggatttttcacct gatatgagctatgtgatatctggagatgcagatgggaaattaaacatctgggactggaag acaacaaaactctacagcaggttaaaagcacatgacaaagtctgtattggtgcagtgtgg catccacatgaaacatccaaagtcatcacatgcggctgggatggtctgattaaactgtgg gactaa

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