Sturnus vulgaris (common starling): 106855280
Help
Entry
106855280 CDS
T08833
Symbol
PABPC1
Name
(RefSeq) polyadenylate-binding protein 1
KO
K13126
polyadenylate-binding protein
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03015
mRNA surveillance pathway
svg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106855280 (PABPC1)
09123 Folding, sorting and degradation
03018 RNA degradation
106855280 (PABPC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svg03019
]
106855280 (PABPC1)
03041 Spliceosome [BR:
svg03041
]
106855280 (PABPC1)
Messenger RNA biogenesis [BR:
svg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106855280 (PABPC1)
mRNA cycle factors
Stress granule specific factors
106855280 (PABPC1)
Spliceosome [BR:
svg03041
]
Complex C
Other components
Complex C specific factors
106855280 (PABPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_7
RRM_10
RRM_5
RBD_RDR6
RRM_occluded
RRM_3
YflT
Motif
Other DBs
NCBI-GeneID:
106855280
NCBI-ProteinID:
XP_014735285
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFER
HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKN
LDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
KPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQTQNRA
AYYPTNQLAQLARPSPRWTAQGARPHPFQNMPGAIRPAAPRPPFSTMRPASSQVPRVMST
QRVANTSTQTMGPRPAAAATAATPAVRTVPQYKYAAGVRNPQQHLNTQPQVAMQQPAVHV
QGQEPLTASMLASAPPQEQKQMLGERLFPLIQSMHPTLAGKITGMLLEIDNSELLHMLES
PESLRSKVDEAVAVLQAHQAKEAAQKAVNNPTGVPSV
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccagcgcccccagctaccccatggcctcgctctacgtgggggacctgcacccc
gacgtgaccgaggccatgctctatgagaagttcagccccgccgggcccatcctctccatc
cgcgtctgcagggacatgatcacccgccgctcgctcggatacgcctatgtcaacttccag
cagcccgccgacgctgaacgagctttggacaccatgaactttgatgtcattaaaggcaaa
ccagtgcgcatcatgtggtctcagcgcgatccatctctacgcaaaagcggtgtaggaaac
atcttcatcaaaaacttggacaaatcaattgataacaaagctttgtatgacacattctct
gcttttgggaacatcctgtcttgtaaggtggtgtgtgatgaaaatggatccaagggttat
ggatttgtacattttgagacacaagaagctgcagaaagagctattgaaaaaatgaatggt
atgctgcttaatgaccgcaaagtatttgttggaaggtttaaatcccgcaaggaacgtgag
gcagagcttggagccagagcaaaagaattcaccaatgtttacatcaaaaattttggagaa
gacatggatgatgagagacttaaggaactctttggcaagtttggtcctgctctaagtgta
aaagttatgaccgatgagagtggaaaatccaaaggctttggcttcgttagttttgaaaga
catgaagatgcccaaaaagctgtagatgagatgaatgggaaagagctcaatgggaaacaa
atctatgtcggccgggctcagaaaaaggtggaaagacagacggagctgaagcgcaagttt
gaacaaatgaagcaggacaggatcaccagataccagggtgtaaacctttatgtgaaaaat
cttgatgatgggatcgatgatgagcgtctccgaaaagagttctccccatttggtacaatc
actagtgcaaaggtgatgatggaaggtggccgcagcaaaggatttggatttgtatgcttt
tcatcaccagaagaagccaccaaagcagtcacagaaatgaatggtagaattgtggctact
aaaccattatatgtagctctagcccaacgtaaagaggagcgccaagctcatctcaccaac
cagtacatgcagaggatggcaagtgtaagagcagtacctaatcctgtaatcaacccctac
cagccagcacctccttcaggatacttcatggcagctattcctcagactcagaaccgtgct
gcgtactatcctactaatcagctcgctcagcttgctagacctagtcctcgctggactgct
cagggtgccagacctcatccattccaaaacatgcctggtgctatccgcccagcagcaccc
agaccaccgttcagtaccatgagaccagcttcttcccaagttccacgagtcatgtcaacg
cagcgtgttgccaatacatcaacacaaacgatgggtccacgtcctgcagcagcagctact
gcagccactcctgctgtgcgcacggtaccacagtacaaatatgctgcgggtgttcgcaat
cctcagcagcacctcaacacgcagccgcaggttgctatgcagcagcctgctgtccatgtg
caaggtcaggaacccttgactgcttccatgttggcttctgcccctccacaagaacaaaag
cagatgttaggtgaacgtctattcccccttattcaaagcatgcaccctactctggcgggt
aagatcactggtatgttgctggagattgacaactctgaactcctccacatgctcgagtct
cctgagtctcttcgttcgaaggttgatgaagctgtagccgtactacaagcccaccaagct
aaagaggctgctcaaaaggcagttaataatcccactggggttccaagtgtttaa
DBGET
integrated database retrieval system
