Sturnus vulgaris (common starling): 106855341
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Entry
106855341 CDS
T08833
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
svg
Sturnus vulgaris (common starling)
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svg04121
]
106855341 (ZSWIM8)
Ubiquitin system [BR:
svg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
106855341 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
106855341
NCBI-ProteinID:
XP_014735423
LinkDB
All DBs
Position
Unknown
AA seq
1822 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKMKD
GLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGS
ADEFQRGEQLFRVRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTDQCLNYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTISPQRRRDLCSQLRQWQLKVIDNVKRGQHKKSLEKLFQGFKPAVEACYFNWEEAY
PIPGITYSSTDKKNSFCWVKAIQQRSCRLQCAESACEAGRSHGQEPGGPCLQPGDRLRPS
PQEPAVRPKELTGKRKVVSETPQRVLRRLSAEGDKAVYKTAVSKAKLPVSKGLTSKHSGK
RRMSSEDSSLEPDLAEMSLDDSSLALGAEASNTFSFAESPLSRSYRDAFEEDGGVYFSEG
PEPTVRSSSMAKKSPKDPVGEMGSGDDDLPSADENSGGVSLKPEEVGENGAAGGGDDGEE
EDDYQVYYLNPQEVAKEDDDKCEGGIEEEQDVFAGIKPLEQENRMEILFACAEALYAHGY
SSEACRLTVELARDLLANPPDLKVEQPPTKGKKNKVSTSKQTWMATNTLSKAAFLLTVLS
ERLEYHNLAFRIGMFALELQRPPASTKALEVKLAYQESEIAALLKKIPLGTNEMNTIRGR
AEELREGTLCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNWNNEMPGDEELGFEAA
VAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKILDKLLDRESQTHK
PQTLSSFYSSSKPTVANQKSPSKHAAQSAAAIQQLPGTSVTQQAAVSTAVQSSPENFVEK
STQESSQRSPCEPAAEATILKQEGKVPSRLALGNRGGYNGRCWGSPVRQKKKHTGMASID
SSAPETTSDSSPTLSRRPLRGGWATTSWGRGQDSDSISSSSSDSLGSSSSSGSRRASGGA
RAKTVEVGRYKGRRLESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTHPSSS
GGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILV
ECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQ
DNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQTVGGTPAQREGATGCSAGGAR
AASEAARGLADSRVTSEPTTVTVAAAVTAAATVMPVISVGSTMYQQHTVAGPAMAHTHTQ
GLHPYTTLQTHIPCNPQYIGHTIQHMPRPAVFPVPGSAYPQGVHPAFIGAQYPYSVTAPS
LAATAVSFPGVPVPSMTQIAVHPYHSETGLSLSSNVALGSVHAGSTFPAIQGASLTTLSS
QPNSLVTGGFPAEDEQHSQPVSPQGLHYLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPP
YTEDVKWLLGLAAKLGVNYVHQFCVGAAKGVLSPFVLQEIIMEALQRLNPAHVHNHLRTP
AFHQLVQRCQQAYMQYIHHRLIHLTPADYDDFVNAIRSARSAFCLTPMGMMQFNDILQNL
KRSKQTKELWQRVSLEMTTFSP
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atggaactcatgttcgcagagtgggaggacggggagaggttttcatttgaagactccgat
cgttttgaagaagactctctttgttccttcatctctgaggcggagagcctttgccagaac
tggagaggatggaggaaacaatcggctggacccaattcccccactgtcaaaatgaaagat
gggctggtgatcccattggtggaactctctgcaaaacaggttgcatttcacattccattt
gaggtggtggagaaagtttatcctccagtgcctgaacaactgcaacttcgaattgccttc
tggagtttcccagaaaatgaggaggatatcaggttgtactcgtgcttggcgaatggcagt
gcagatgagttccagcgaggggagcagctcttccgggtgagggctgtcaaagaccctctc
cagataggtttccatctgagtgccaccgtggtgcccccgcagatggtgccccccaagggc
gcgtacaacgtggcggtgatgtttgaccggtgccggatcacgtcgtgcagctgcacctgc
ggcgccggggccaagtggtgcgcgcacgtcgtggcgctctgcctcttccgcatccacaat
gcatctgcagtgtgcttacgagcacctgtttctgagtctttgtctcggctacaaagagac
cagttgcaaaaatttgctcagtacctaatcagtgaacttccacaacagattcttccaacg
gctcagcgcttgctggacgagttattatcttcccagtctactgccatcaacacagtgtgt
ggagccccagatcccactgctggaccttctgcatcagatcaaagcacctggtacttagat
gaatctactctgagtgacaacataaagaaaacccttcataaattctgtggaccctctcct
gttgttttcagtgatgtgaattcaatgtatctgtcttccactgagccaccagctgctgct
gagtgggcttgtctgctgcgtcccctgcgaggaagagaacctgaaggaatctggaacttg
ctttccattgtgcgggagatgtttaagagacgggatagcaatgcagctcctttgctggag
attctgactgaccagtgtctcaactatgagcagataaccggctggtggtacagcgtgcga
acgtctgcgtcacacagcagcgcgagtgggcacacgggacgcagcaatggccagtcagaa
gtcgctgctcatgcttgtgcaagcatgtgtgatgagatggtggttctttggaggctggct
gtcctcgacccaactattagtccacagaggcgcagggatctttgctcacagctcagacag
tggcagctgaaagtcatagataatgttaagaggggtcagcacaagaaatcactggagaag
ctcttccaaggtttcaagccagctgtagaagcctgttacttcaactgggaggaagcttat
cccattcctgggattacatatagcagcactgacaagaagaactcgttctgttgggtaaag
gccatccagcagaggagctgccggttgcagtgtgcagaaagtgcctgtgaggctggtagg
agccacggccaggagcccgggggaccatgtctgcagcctggggacagactgcggccctct
ccccaggagcctgcggttcggccaaaagaacttaccgggaagcggaaagttgtctctgaa
acgccacagagggttctgagacggctctcggcagaaggggataaagctgtctataagact
gcagtgagcaaagcaaagttgccagtgagcaaaggcttgaccagtaaacatagtgggaaa
cgccgtatgagcagtgaggacagctctctggagcctgacttggcagagatgagcctggat
gacagcagcttggcactgggggcagaagccagcaacacctttagttttgcagaaagtcca
ctgagcaggagctacagggatgcctttgaggaggatggtggagtgtacttctctgaggga
cctgagcccactgtcaggagcagttccatggccaagaaatcccccaaggatcccgtgggg
gagatgggtagtggcgatgatgacctgccttccgcggatgagaactctggtggcgtgagt
ctgaagccagaggaagtaggagagaatggtgcagcggggggaggggatgatggagaagag
gaagatgattatcaggtgtactatctgaatccacaagaggtagccaaggaagatgatgac
aagtgtgaagggggaattgaagaagagcaggatgtgtttgctggtataaagcctctggaa
caggagaaccggatggagatcctgtttgcctgtgcagaggcactgtatgcacatggatac
agtagtgaggcttgccgcttgactgtagagcttgccagggacctactggccaaccctcca
gatctcaaagtggagcagccaccaactaagggcaaaaagaacaaggtgtcaaccagcaag
cagacatggatggcaaccaacaccttgtctaaagctgctttcctgctgactgtcttgagt
gagcggctggagtaccacaacctggccttccgaataggaatgtttgctctggagctgcag
agaccacctgcctcgaccaaggctctggaggtgaagttggcttatcaggaatctgagatt
gcagccctcttgaagaagattcccttgggcaccaatgagatgaacactattcgaggaaga
gctgaagagctaagagaagggacattgtgtgattaccgtcctgtcctgcctctgatgttg
gcaagctttatatttgatgtgctgtgcactccagtggtttctcctacaggctctagaccc
ccgagccgtaattggaataatgaaatgcctggagatgaagagcttggttttgaggcagct
gttgctgctcttggtatgaaaacaactgttagtgaagcagaacatcctctgttgtgtgaa
ggcacacgaagggagaaaggggatttggcactagccctgatgattacttacaaggatgat
cagtctaagctgaagaagattttagacaaactcctggacagagagagtcaaactcacaag
ccacagacgctgagttccttctactcatccagcaagcctacagttgcaaatcaaaaatct
ccttccaaacatgctgctcagtctgctgcagccatccagcagcttccagggacttctgta
actcagcaagctgctgtaagcactgcagtccagagcagtcctgagaactttgtggagaag
agtacacaggagagctctcagaggtccccctgtgagccagctgcagaggccactattttg
aaacaagagggaaaggtccccagtcgtctggcccttggaaaccgaggtggatacaatggg
agatgctggggttcacctgtcaggcagaagaagaaacacacaggcatggctagtattgac
agcagtgctcctgaaaccacctctgacagttctccaacgctcagtcggcgtcccctacgt
gggggctgggccacaacatcctgggggagaggacaggacagtgacagcatcagcagttct
tcaagtgattcactgggatcttcctcttccagtggcagtaggagagccagtgggggagct
cgtgcaaagactgtggaagttggcaggtataaagggaggcggctggagagccatgctcct
catgtcccaaaccagccctcagaggcagctgctcacttctactttgaattggccaagaca
gtccttatcaaagcaggtggaaatagcagtacctctatcttcacccacccttcctccagt
ggtgggcaccagggaccacaccgcaacctgcacctctgcgcctttgagattgggctgtac
gcactagggctgcacaacttcgtgtctcccaactggctctctcgaacttactcttcccat
gtctcttggatcacagggcaggccatggagattggtagtgcagccttgaacatcttggtg
gagtgttgggatggacatctgactccccctgaggtggcatcattggcagacagagcttca
cgggccagagactccaacatggtgcgggcagctgctgaactggcactcagctgcctgcct
catgctcatgccctgaacccaaacgagatccagagggctctggtgcagtgtaaggaacag
gacaacctgatgttggaaaaggcctgcatggcagtagaagaggcagccaaaggaggtggt
gtgtacccagaagtcctctttgaagtagctcatcagtggtactggctttacgaacagact
gttggtgggaccccagcccagagagaaggtgccactggctgcagtgccggtggcgcacgg
gccgcatccgaagcagcgcgtggcttggcagacagtcgggtgacctcggagcccaccacg
gtgacagtggcagctgcagtaactgcggcagcaaccgtcatgcctgtcatctctgtggga
tccaccatgtaccagcagcacacggtggcagggccagcaatggcacatacacacacgcag
ggtctccacccttacaccacccttcagacccacatcccctgtaatccccagtatatcgga
cacactatccagcacatgccacgcccagctgtcttcccggtccctggctcggcgtatcca
cagggtgtccatcccgcattcataggggcgcagtacccttactcagtaacagcaccgtcc
ctggcagctacagcagtgtccttccctggcgtgcccgtcccctccatgacgcagattgcc
gtgcatccctaccacagtgagacgggactgtcgctgtcttccaatgtagcgctaggtagt
gtccatgcaggatcaacgttcccagcgattcagggtgcttccttgacaactctgtcctca
cagcccaactcccttgttacagggggttttcctgccgaggatgagcagcacagtcagcct
gtgagcccccagggtctgcactacctccactctgcataccgagttgggatgctggctctg
gagatgcttggccgaagagctcacaacgaccatcccaacaacttctcccgcagcccgccc
tacactgaggatgtcaaatggctccttgggttagctgcaaagttaggtgtaaactacgtg
catcagttttgtgttggtgcagccaagggcgtgctgagcccttttgtgcttcaggagatc
atcatggaagctctgcagaggctcaaccctgcccatgtgcacaaccacctgcgcacccca
gccttccaccagctggtgcagaggtgccagcaggcctatatgcagtacatccatcatcgg
ctgatccatctcactccagctgactacgatgactttgtgaatgccatccgcagcgccaga
agcgccttctgcctgactcccatgggcatgatgcagtttaatgatattctccagaaccta
aagcgcagcaagcagacaaaggagctgtggcaaagggtctctctggaaatgaccaccttc
tcaccatga
DBGET
integrated database retrieval system
