Sturnus vulgaris (common starling): 106855584
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Entry
106855584 CDS
T08833
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
svg
Sturnus vulgaris (common starling)
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svg03000
]
106855584 (PRDM1)
Transcription factors [BR:
svg03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
106855584 (PRDM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2HE
B129_C2H2-zf
CapR
Motif
Other DBs
NCBI-GeneID:
106855584
NCBI-ProteinID:
XP_014735896
LinkDB
All DBs
Position
Unknown
AA seq
822 aa
AA seq
DB search
MRIKGCFLFFQAATHCSSDAVSFKNLVKGREWTMKMDMEDADMTLWTEADFEEKCTYIVN
DHPLDPSADGGTLTQAEASLPRNLTFKYASNCKEVTGVISKEYIPKGTRFGPLVGEIYTS
DTVPKNANRKYFWRIYSNGELHHFIDGFNEDKSNWMRYVNPGYSVQEQNLAACQNGMNIY
FYTIKPIPANQELLVWYCRDFAERLHYPPSRELTMMNLTQTHIIPKQHSADKDELYQKSV
PKKEHSVKEILKMESNPPKGKDFFQTNISPVTPEKDLDDLRKNYSPERCFFPRVVYPIRP
HIPEDYLKASLAYGMDRPSYITHSPIQASTTPSPSGRSSPDQSLKSSSPHSSPGVTVSPL
APTSQEHREPYSYLNGSYGSEGLGSYPGYAPPGHLSPAFLPSYNPHYPKFLLPPFNMSCN
NLSALNNINGINNFNLFPRMYPLYGNLLSGGSLSHHMLNPSTLPSSLPSEGGRRLLQPDH
PRDFLIPAPNSAFSITGAAASMKDKPCSPTSGSPTAGTAASSEHIMQPKPTSVVLAATGG
EEAMNLIKSKRNVTGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHSGERPF
KCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKL
CPAKFTQFVHLKLHKRLHTRERPHKCIHCHKSYIHLCSLQVHLKGNCPVAPASGLSMEDL
NRINEEIEKFDISDNADKLEEVEDNIDLTSIVEKDILTMLRREMEGANLKVSLQRNLGNG
LISSGCNLYESSDMSVMKLPHSHPLPLLPVKVKQETIEPMDP
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgaggattaaaggctgttttctttttttccaggctgctacacactgtagctcggacgct
gtgagtttcaagaatctggtgaaagggagagagtggacaatgaaaatggacatggaggat
gctgacatgactctgtggacagaggctgattttgaagagaagtgcacatatattgtaaat
gatcacccgctggatcccagtgccgatggaggcaccctaactcaggcagaggcttccttg
ccaaggaacttgactttcaaatacgcatctaactgcaaagaggtcactggagttataagc
aaagagtacatcccaaaaggaacacgttttggacccctggtaggagagatctataccagt
gatacggttcccaagaatgcgaacagaaaatacttttggcggatctattcaaatggtgaa
cttcaccacttcattgatggatttaacgaggacaagagcaactggatgcgttatgtaaac
cctggctactctgttcaggagcagaacttggctgcttgtcagaatggaatgaacatctac
ttctataccatcaagcccatccctgccaaccaagagctgcttgtgtggtactgccgagat
tttgcagagaggctgcactatcccccctccagagagctgacaatgatgaacctcacacaa
actcacattattccaaagcagcacagcgctgataaagatgagctttatcagaaaagtgtc
ccaaagaaggagcacagtgtgaaagaaatcctgaaaatggaatccaatcctcctaaagga
aaagacttctttcagaccaacatttcaccagttactccagaaaaagacttggatgattta
cgtaagaactatagcccagagaggtgtttcttccctcgagttgtctacccgatccgacct
cacattccagaagactatctgaaagcttccttagcatacggcatggacagacccagctac
attactcattcacccatccaggcatctactacaccaagtccttctgggaggagcagccct
gaccaaagtttaaaaagttcaagccctcacagtagtccaggggtcacagtttcacctctg
gcacctacttcccaagagcacagagagccatactcttacttgaacggatcgtatggctca
gaaggattggggtcttatcctggatatgcaccccctggccacctctcacctgcctttcta
ccatcctataacccccattaccccaaattcctgttacctccattcaatatgagctgtaat
aacctgagcgctttgaacaatatcaatggcatcaacaatttcaatctcttcccaaggatg
taccctctttatggcaacctgctcagcggaggtagcctttcccaccacatgctcaacccc
agcacgctccccagctcattgcccagtgaaggaggccgtcgactgctgcagcctgatcat
ccgagagacttcctcataccagcacccaacagtgccttctctatcacgggcgctgctgcc
agcatgaaggacaagccatgcagccctaccagtgggtcccccaccgctggtacagcagcc
agttcggaacacataatgcaacctaaacctacctcagtggtgttggctgccaccggcggt
gaagaagccatgaatctcattaaaagtaagaggaatgtgaccggttacaaaaccctccca
tacccactgaaaaagcagaatgggaagatcaagtacgaatgcaatgtttgctccaagacc
tttggccagctctccaatctgaaggtgcacctccgagtacacagcggagagagaccattt
aaatgccagacttgcaataagggcttcacgcagctggctcacctccagaagcactatctg
gtacacacgggagaaaaaccccacgagtgtcaggtttgtcacaagcggttcagcagcacc
agcaatctcaaaacccacctgcggctccactctggagagaagccttaccagtgcaagctc
tgcccagccaaattcacccagtttgtgcacctgaagctgcacaagcgtctccacacccgg
gaacgcccccataaatgcatccactgccacaagagctacattcacctctgcagcctccag
gtccacctgaagggcaactgccccgtcgccccagcctccggcctctccatggaggacctg
aaccggatcaatgaggagatcgagaagttcgacatcagtgacaatgctgacaagctggaa
gaagtggaggacaatatcgacttgacatcaatcgtggagaaggatatactgaccatgctc
aggagggaaatggaaggagctaacctgaaagtctctctacagaggaacctgggaaatggg
cttatctcctcaggatgcaacctttacgagtcgtcagatatgtcagttatgaagttgcct
cacagtcacccactacctctgttacctgtaaaggtcaaacaagaaacaattgaaccaatg
gacccttaa
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