Sturnus vulgaris (common starling): 106855789
Help
Entry
106855789 CDS
T08833
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106855789 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svg03019
]
106855789 (EDC4)
Messenger RNA biogenesis [BR:
svg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106855789 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
106855789 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
Beta-prop_TEP1_2nd
Beta-prop_HPS5
WD40_Prp19
WD40_CDC20-Fz
WDR55
RnlA-toxin_DBD
Motif
Other DBs
NCBI-GeneID:
106855789
NCBI-ProteinID:
XP_014736200
LinkDB
All DBs
Position
Unknown
AA seq
1401 aa
AA seq
DB search
MASCSSIDIEGATQHLRDILKLDRPGGSVNENQRPSNSYNGDLNGLLVPDPLGSGDGPAL
AKPVHRSISLGALQEKQVICLSGDDSSTCLVISAKDVEIVASSDSSITSKARGSNKVKIQ
PVARYDWEQKYYYGNLIAVSNSYLAYAIKAASNGSAMVRVLSVSTAERTLLKGFTGGVAD
LAFAHLNSNQLACLDEAGNLFVWRLAMDKEKIQEEILVNIKRPDNTPLNTFRRIIWCPFI
PDDNEESGEEGSQTLALLHEDRAEVWDLDIIRTNNSSWPVEVPDIKEGFIVVKGHSTCLS
EGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQD
PEVPFWRFLITGADQNRELKMWCTVSWTCLQTVRFSPDIFSSMNILPSLKVCLDLSAEYL
ILSDVQRKVLYVMELMQNQEEGKAYFSSISEFLLTHPVLSFGIQAVSRCRLRHTEVLPAE
EENDSLSVEGAQGPGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDTSASMPSHSSH
EEFAFPDHMADMSTEGLGSEKESVHGSQPDLRRIADLPVPADFLSLSNEAKPKLMTPDAF
MTPSTSLQQIAVSPGSSVSSLTAVTAMSSTSVTDASLPRASEDLTVSPKMQLDTSLTLSS
SSSSLQTSPRSHSVLIPGLPDKLTPKAPVPVAPGNSSLALELQEVEPLVVPQASPTRERS
PDVISSASTAMSQDIPEIASETLQRSFAAPAGLPGEVLEPGHHADSMASAASALHLLSPR
NRHNSEHSHHSLDMPPVEVDRLNAPSLLETALTQENASSDSVVSQPWPAAPDITRETRNS
MADSPRDEVEEKHKSSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTSGGFGAKASA
QRLPVKDWKVKASPRASPKLKRKGKKDDGDMNQSPRSSNNQVTPEFQDELMCILRSQQRE
LSELRQNQMDLLQRLTDHLDAIQSSLMGHMERVIDSQQEQEQRRLDRALMEGQQRNGQLQ
EHLSQQLSQSLSTTVCNRLERTIREEMKKTVPQCISKSMDPTVSQLSNTIAAKLTAVEGT
LKENITKLVKSKNLTDSVVRATADTLQGPIQSAYREAFQSVVLPAFEKSCQSMFQQINDT
FKQGTQEYIQQLEAHLKNKKVREQEVRDPLLNQLRQLISTFQSTTEQLASTIAASVHAEV
QHQLHIIVGNMQESILAQVQRVIKGEVSLAMKEQQAAVTSSIVQAMRSAAGTPIPSTHMD
FQSQQTHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDTQQVFGQHPCPLSQPVLLS
LIQQLSSDLGTRTELKLNYLEDAVMHLDQSDPITRDHMGSVMNQVRQKLFQFLQVEPHNP
LSKPARRLMIMLQGLVTPGMT
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctgctccagcatcgacatcgagggcgccacccagcacctgcgggacatcctc
aagctggaccggccgggaggttcagtgaatgagaaccagagaccgtcgaattcgtataac
ggggacctgaatgggctgctggtgcctgatccccttgggagtggagatggacctgctttg
gccaagccagtgcatcgcagcatctctctaggagccctgcaggagaaacaagtcatctgc
ctctctggtgacgacagctccacatgcttagtgatatcagcaaaagatgtggagatagtg
gccagcagtgattccagcatcaccagtaaggccagagggagtaataaggtgaaaatacag
cccgttgctagatatgactgggagcagaaatactattatggcaatctgatagctgtttca
aactcttacctggcttatgccattaaagctgccagcaatggctctgctatggtgcgggtg
ttgagtgtgagcactgctgagcggaccttgctgaagggattcacaggaggagtggcagac
ctggcctttgctcacctcaactccaaccagctggcctgcctggacgaggctggcaacctt
tttgtctggcgcctggccatggataaagaaaaaatccaagaggagatcctggttaacatc
aagcgacctgacaataccccactgaacaccttccgaagaatcatctggtgccctttcatc
ccggacgataacgaggagagcggggaggagggcagtcagacgttggcattgctgcacgag
gacagggcagaggtgtgggatttggacatcatccgaacgaacaacagctcctggccagtg
gaagtgcctgatatcaaagaaggtttcattgtggtgaaaggccacagcacgtgcctgagc
gagggagccctttctccagatggaactgtgttggccacagcaagccatgacggttttgta
aaattctggcagatctatatcgagggacaggatgagccaaggtgtcttcatgagtggaaa
ccccatgatggtagacctctttcctgcctgctcttttgtgacaaccataaaaagcaagac
ccagaagttcccttctggaggtttctcatcacaggagccgatcagaacagagagctgaag
atgtggtgcacagtgtcttggacctgtttgcagactgttcgcttttctcctgacatcttc
agctccatgaatattcttcccagcctgaaagtctgcctggacctctccgctgaatatctg
atactgagtgatgtgcagagaaaagtcttgtatgtgatggagttgatgcagaaccaagag
gagggcaaggcttacttcagctccatctcagagttcctccttacccacccagtgctgagc
tttggcatccaggccgtgagccgctgccggctgaggcacaccgaggtgctcccagcagaa
gaggaaaatgacagcttgagtgtagaaggtgcacagggccctggagctgttgaatcagca
gcaggtgtgctgataaaactcttctgtgttcacaccaaggccctacaggatgtgcagatt
agattccagcctcttcatagccctgacacaagtgcttccatgccttcccatagctctcat
gaggagtttgcttttccagaccacatggctgatatgagcacggaagggctgggatctgaa
aaggagtctgtgcacggctcccagccagacctgcggcgtatcgcagacctgcctgtgcca
gcagacttcctttccctctccaatgaagccaaacccaagctgatgactccagatgcattc
atgacaccaagtacttctcttcaacagatcgctgtctctccaggcagcagtgtcagttcc
ctgactgcagtcacagccatgagcagcacttctgtcacagatgcctctctgcccagagca
tcagaagacttgactgtgagccccaagatgcagctggacaccagcctcacgctgagcagc
agcagcagcagtctccagaccagtcctaggagtcactctgttcttatcccaggcctccct
gacaagctgacaccaaaggcacctgttccagttgcaccaggaaactcctctctagcactg
gaactgcaggaagtggagcccttggtggtgccccaggcttcccccacgcgcgagcgctcc
ccagacgtcatttcctctgcttccacagccatgtcccaggacatcccagagatcgcttcc
gagaccctgcagcgcagctttgcggctccggccgggctcccgggggaggtgctggagccc
gggcaccacgcagacagcatggcctcagctgcctcagccctgcacttgctgtctcccagg
aaccgccacaactctgagcacagccaccactctttggacatgcctccagtggaggtggac
agactgaatgctccatctttactggagactgctttaactcaggaaaatgcatcttctgac
agtgttgtgagtcagccgtggccagcggctcctgacataacccgggaaaccaggaacagc
atggcagacagcccaagggatgaggttgaagaaaagcacaagagctcttcctaccatcga
cacagctaccaccttctgcagcacgacagccaggatgccagtgcagaacaaagtgaccat
gatgatgaagttgcaagcttggcttctacgtcaggtggattcggtgccaaagcatctgcg
cagaggctgcctgtgaaggactggaaagtcaaggcctccccccgggcttccccaaagcta
aagcggaagggcaagaaagatgatggggatatgaaccagtcaccaagatcatctaacaac
caggtgacaccagagttccaggatgagctgatgtgcatcctgaggagccaacagagggaa
ctgtccgagctgcggcagaaccagatggacctgctgcagagactcacggatcacctcgat
gccatccagagctccctcatgggccacatggagagggtgatcgactcccagcaggagcag
gagcagagaaggctggaccgggcgctgatggaagggcagcagcgcaatgggcagctccag
gagcacctgtcccagcagctctcccagtccctgtccacaactgtgtgtaaccgactggag
aggaccattcgggaggagatgaagaagacagtgccccagtgcatttccaagagcatggac
cccactgttagccagctcagtaatactattgctgccaagctcactgctgttgaggggaca
ctgaaagagaatattaccaagctagtgaaatcaaagaaccttacagacagtgttgtgagg
gccacagctgacactctgcagggacccatccagtcagcctacagggaggccttccagagc
gtcgtgctgccagcctttgagaagagctgccagtccatgttccagcaaatcaatgacacc
ttcaagcagggcacacaggaatatatccagcagctggaggctcacttgaagaacaagaag
gtacgagagcaggaggtgcgggacccgctgctgaaccagctccggcagctcatcagcacc
ttccagagcaccacggagcagctggcatccaccatcgcagccagtgtccatgctgaggtg
cagcaccagctgcacatcatcgtgggcaacatgcaggagtctattttggcccaggtgcag
agagtcattaaaggagaagtgagcctggctatgaaggagcagcaagcagctgtcacctcg
agcatcgtccaggcaatgcgctcggcagccgggacacccatcccctctactcacatggat
ttccagtcccagcagactcacatccttcagctgctccagcagggacacctcaaccaagct
ttccagcaggctctaacagcagctgatctcaacctggttctatatgtctgtgagactgtg
gatactcagcaagtctttggacagcatccatgcccgttgtcccagcctgtgctgctctcc
ctcattcagcagctctcctcagatctgggcactcgtacagaattgaagttgaactacttg
gaggatgcagtgatgcacctggaccaaagtgaccccatcaccagagaccacatggggtca
gtcatgaaccaggtgcggcaaaagctcttccagttcctccaggtggaaccccacaaccct
ctgagcaaacctgcacgtcgcctcatgatcatgctgcagggcctggtcacccctggcatg
acctag
DBGET
integrated database retrieval system
