Sturnus vulgaris (common starling): 106855945
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Entry
106855945 CDS
T08833
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg04010
MAPK signaling pathway
svg04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106855945
04020 Calcium signaling pathway
106855945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
svg04040
]
106855945
Ion channels [BR:
svg04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
106855945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
106855945
NCBI-ProteinID:
XP_014736451
LinkDB
All DBs
Position
Unknown
AA seq
2246 aa
AA seq
DB search
MARFGDDLPTRYGGGGPAGAGRGSSRQGGPQAGQRMYKQSMAQRARTMALYNPIPVKQNC
FTVNRSLFIFSEDNVIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYMGK
FHKTCFSNETGEEVGDFPCGEEPPARQCESGTTCREYWQGPNYGITNFDNILFAVLTVFQ
CITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENR
RAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDVLKRAAIKKSKNDLI
HAEEGEDHFTDICSVGSPFARASLKSGKNESSSYFRRKEKMFRFFIRRMVKAQSFYWVVL
CVVALNTLCVAMVHYDQPEKLTTALSDLHPWVIVGSIFEVIWAAVKPGTSFGISVLRALR
LLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQDET
PTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVHSGMFSSIYFIVLTLFGNYTLL
NVFLAIAVDNLANAQELTKDEEEMEEATNQKLALQKAKEVAEVSPMSAANISIAAKQQNS
SKSKSVWEQRTSQIRMHNFRASCEALYNELDPEERVRYATTLHIRPDMKTHLDRPLVVEP
RGEGRNNITKLSPVDVQEVVEHPKPTSSDGAEAPRKHHRHREKEKLGEQEKGDVAKDESG
DTGAGNKEERHRQHRSRSKEVEGGSKEGKSDRNRGQEGGKRHHRRGSVEEGADKEHRRHR
SHRHSSDRPGKEGNGTANGARGERRARHRAVPRSANRDGEPARGDSAEEPHRRHRLRNRA
LSAYESVEKDGADKEGEAGEKEHRNHQPKENQCELEASGSGSGPGSVPVHTLPSTYLQKV
PEQPEDADNQKNVTRMIQPPLDKTTTVNIPVTITAPPGDTTVIPMNNVEFENKTEEKKDV
DDLTKNGPKPILPYSSMFILSPTNPIRRLFHYIVNLRYFEMVILIVIALSSIALAAEDPV
QAESPRNDALKYLDYIFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVA
FAFSGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFM
FIFAVIAVQLFKGRFFYCTDESKELEKDCRGQYLDYEKNEVEAQPREWKKYEFHYDNVLW
ALLTLFTVSTGEGWPTVLKHSVDATYEEQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVA
LIIITFQEQGDKVMSECSLEKNERACIDFAISAKPLTRYMPQNKQSFQYKMWKFVVSPPF
EYFIMVMIALNTIVLMMKFYDAPEAYEEMLKCLNIVFTSMFSMECVLKIIAFGVLNYFRD
AWNVFDFVTVLGSITDILVTEIAVSTDNFINLSFLRLFRAARLIKLLRQGYTIRILLWTF
VQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALDDETSINRHNNFRTFLQALMLLFRSA
TGEAWHEIMLSCLSNRACDPLSGLTKKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDN
FEYLTRDSSILGPHHLDEFVRVWAEYDPAACGRISYTDMYEMLRHMSPPLGLGKKCPARV
AYKRLVRMNMPISPEDLTVHFTSTLMALIRTALEIKLASGGVKQHQCDAELRKEISLVWP
NLSQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKNSREQVQPPGGLCQPGPVSLFH
PLKATLEQTQPTTFSNAKAFLRQKSSASLNNGGALPPPEGGIKESSSWGTQRTQDVFYET
RSPAFERGHSEEIPIERVVEMKEISPTVANGEPQPGLESQGRAASMPRLAAETQPIPDTS
PMKRSVSTLAPQRPHAMHLYEYSLERMPPEQGHHHHHHRCHRRKEKKQKSLDXGPPITCL
MDKLVSALKGGFVPGGDAQPLCSSSKDKKQERGRSQERKQHSSSSSEKQRFYSCDRYGSR
DRAQPKSAEQSRPTSPNGGPEHGPHRQGSGSVNGSPLLSTSGASTPCRGRRQLPQTPLTP
RPSITYKTANSSPVHFTTFQTPTFSPGRLSRGLSEHNALLRGDQQPPPPAVARIARSAPR
PRTRSPSRRPWPPTRAAPQGLPTSPP
NT seq
6741 nt
NT seq
+upstream
nt +downstream
nt
atggctcggtttggggatgatctgccaacccgctatggaggtggagggccggccggggct
ggaagagggagcagccggcaaggtggcccccaagccggccaaaggatgtataaacagtcg
atggctcagagagccaggactatggctctctacaaccccatccctgtcaaacagaactgc
ttcacagtcaacagatccctcttcatcttcagtgaagataatgttatacggaaatacgcc
aagcgaataacagagtggcctccatttgaatacatgattttagctacaatcatagccaat
tgtattgtgctggctctggaacagcatttgccggatggagacaagacaccgatgtcagag
agactggacgacactgagccgtactttattggaatattttgttttgaagctggtatcaaa
atcatcgctctgggctttgtttttcacaaaggctcttacctgaggaatggctggaacgtg
atggattttgtcgtggtcctcacagggattctggcgactgctgggactgattttgacctg
cggaccttgcgagccgtgcgggtgctgcggcccctgaaactcgtgtcgggaatcccaagc
ctgcaggttgtcctcaagtccatcatgaaggccatggtgcccttgctgcagattgggctg
ctcctcttctttgccattgtgatgtttgccatcatcgggctggagttttacatgggcaaa
ttccacaaaacctgcttttccaacgagacaggtgaggaggtgggggattttccctgtgga
gaggagcctcctgccaggcagtgtgagagtgggaccacgtgcagggagtactggcagggc
cccaactacggcatcaccaactttgacaacatcctgtttgctgtgctcaccgtgttccag
tgcatcaccatggagggctggactgacatcctctacaacacgaatgacgctgcaggaaat
acctggaactggctttacttcatccctctcatcatcattggctctttcttcatgctcaac
ctggtgctgggcgtcttatcaggggaatttgccaaggagcgggagcgggtggagaaccgc
cgggcgttcctgaagctccgcaggcagcagcaaatcgagagggagctcaacgggtacctg
gagtggatcttcaaagcagaggaggtcatgctggccgaggaggacaagaacgcggaggag
aagtcccctctggacgtgttgaaaagagccgcaataaagaagagcaaaaatgacctgatt
catgcagaagaaggtgaggaccatttcacagacatttgctccgttgggtctccctttgcc
cgtgccagtttgaagagtggcaagaacgagagctcgtcctacttcaggaggaaagagaag
atgttccgcttcttcatccgccgcatggtgaaggctcagagcttctactgggtggtgctc
tgcgtggtggccctcaacaccctgtgtgtggccatggtgcactatgaccagcctgagaag
ctgaccactgctctctctgatctgcacccatgggtcatcgtgggcagcatttttgaggtg
atttgggctgcagtgaagccgggaacctcctttggcatcagcgtcctgcgagccctgcgc
ctgctcaggatcttcaaggtgacaaagtactggaattcgctgaggaatctggtggtgtcc
ttgctgaactccatgaaatccatcatcagtttgcttttcctgctgttcctgttcatcgtg
gtctttgctctgctggggatgcagctctttggaggacagttcaatttccaagatgaaact
ccaaccacgaatttcgataccttccctgctgccatcctcacagtcttccagatcctgaca
ggggaggactggaatgctgtcatgtaccacgggatcgagtcccagggcggtgtccactcg
ggaatgttctcctccatctacttcatcgtcctcaccctgtttggtaactatactctcctg
aacgtcttcctggccatcgctgtggacaacctggccaacgcccaggagctgaccaaggac
gaggaggagatggaggaagccaccaaccagaagctggccctgcagaaggccaaggaagtg
gctgaagtgagccccatgtcagcagccaacatctccatagctgccaagcagcagaactcc
tccaaatccaagtcggtttgggagcagaggacgagccagatccggatgcacaacttccga
gccagctgcgaggcgctgtacaacgagctggaccccgaggagcgggtccgctacgccacc
accctgcacatccgacccgacatgaaaacacacctggaccggccgctggtggtggagccc
cgcggcgagggcaggaacaacatcaccaagctgagccccgtggatgtccaggaggtggtg
gagcatcccaaacccacctccagcgatggggcagaagcgcccaggaagcaccaccggcat
cgggagaaggagaagctgggcgagcaggagaagggagacgtggccaaggatgagagcggc
gacaccggggcgggcaacaaggaggagaggcacaggcaacaccgcagccgcagcaaggag
gtggaaggcggcagcaaggaagggaaaagcgaccgaaacagggggcaggaagggggtaag
aggcaccaccggcggggctcggtggaggaaggcgccgacaaggagcaccgcaggcaccgc
agccaccggcactcgtccgaccggccgggcaaggagggcaacggcaccgccaacggagcc
cgcggcgagcggcgagcccggcaccgcgccgtgccccgctctgccaacagggacggcgaa
cccgccaggggggacagtgccgaggagccccaccggagacaccggctccggaacagggca
ctgtccgcctacgagtccgtggagaaggacggcgccgacaaggagggcgaggctggcgag
aaggagcaccggaatcaccagcccaaggagaaccagtgtgagctggaggccagtggcagt
ggcagtggccctgggagtgtccctgtgcacaccctgcccagcacttacctgcagaaggtg
cccgagcagccggaggatgctgacaaccagaagaatgtgacgaggatgattcagcccccg
ctggacaaaaccaccactgtgaacatccctgtcaccatcactgcccctccaggggacacc
actgtcattccaatgaacaacgtggagtttgaaaacaaaacagaggagaagaaagacgtc
gatgacttgacgaaaaatgggcccaaaccgatcctgccttacagttccatgttcatcctc
agccccacaaacccgatccggcgcctgttccactacatcgtcaacctgcgctactttgag
atggtgatcctgatcgtcatcgccctcagcagcatcgccctggctgcagaggatcctgtc
caggctgagtctccccggaatgatgctctgaaatacctggattatatatttacaggagtc
ttcacctttgagatggtgatcaagatgattgacttggggctgctgctccaccctggctcc
tatttccgtgacctgtggaatatcctggacttcattgtggtcagtggggccttggtggct
tttgccttctcaggaaccaaaggcaaggacatcaacaccatcaagtccctgcgagtgctg
cgtgtgctcaggcccctgaagaccataaaacggctgccaaaactgaaggctgtctttgac
tgcgtggtgaactccctgaagaacgtcctcaacatcctcattgtttacatgctcttcatg
ttcatcttcgccgtcatcgccgtgcagctcttcaagggccgcttcttctactgcacagac
gagtccaaggagctggagaaggactgcaggggtcagtacctcgattatgaaaaaaatgag
gtggaggcacagcccagggaatggaaaaagtacgagttccactacgacaacgtgctctgg
gctctgctcacactcttcaccgtgtccacaggggaagggtggccaactgtgctgaagcac
tcggtggatgccacctacgaggaacaggggcccagccctggctacaggatggaaatgtcc
atcttttacgtggtgtattttgttgtcttcccttttttctttgtcaacatctttgtggcg
ttaatcatcatcaccttccaggagcaaggagataaagtgatgtcagagtgcagcctcgag
aaaaacgagagagcctgcatagactttgccataagtgccaagcccctgacccgttacatg
cctcagaacaagcaatccttccagtacaagatgtggaaattcgtggtgtcccctcccttt
gagtattttatcatggtcatgattgctctcaacaccatcgtcctcatgatgaaattctat
gatgctccagaagcatatgaagaaatgctgaaatgcctgaatattgtgtttacatccatg
ttttccatggaatgtgtgctgaagatcattgcctttggtgtgctgaattatttccgagat
gcctggaatgtctttgattttgtaacagtgttgggaagtattactgatattttagtaaca
gagattgcggtaagtacagacaacttcatcaacctcagcttcctgaggctcttcagggca
gccaggctcatcaagctcctgcgccagggctacaccatccgaatcctgctctggacattc
gtgcagtccttcaaggccttgccttatgtgtgtctcctcattgcaatgctcttcttcatc
tatgccattattggcatgcaggtttttgggaacattgccttagatgacgaaacctccatt
aatcggcacaacaacttccggaccttcctccaagccctgatgctcctgttcaggagtgct
acgggggaagcctggcacgagatcatgttgtcctgcttgagcaacagagcctgtgacccc
ctctctggcctcaccaaaaaggaatgtggcagcgattttgcctatttctacttcgtgtca
ttcattttcctctgctccttcctgatgctgaacctgttcgtggctgtgatcatggacaat
ttcgagtacctgacccgggactcctccatcctcgggccgcatcacctggacgagtttgtc
cgggtgtgggctgagtacgacccggcagcctgcgggcgcatcagttacacagacatgtat
gagatgctgagacacatgtccccacctctaggccttgggaagaaatgcccagctcgtgtt
gcctataagcgcctggtgaggatgaacatgcccatctctcctgaggatttaactgtgcac
ttcacctccacgctgatggccctgatccgaacagccctggagatcaaactggcctcaggc
ggtgtgaagcagcaccagtgcgatgctgagctgaggaaggagatctccctggtctggccc
aacctgtcccagaagactctggatttgctggtgcctcctcacaaacctgatgagatgact
gtggggaaggtctacgcagccctgatgatatttgacttctacaagcagaataagaacagc
agggagcaagtccagccccctgggggcctgtgccagcccgggccagtgtccctgttccac
cccttgaaggccaccctggagcagacccagcccacgaccttcagcaatgccaaggctttc
ctgcgccagaagagctcggcctccctcaacaacgggggagctctgccacccccagaggga
gggatcaaagagtccagctcctgggggacccagcgcacccaggacgtgttctatgaaacc
aggagcccagcttttgagagaggccactccgaggagatccccatcgagagggtggtggaa
atgaaggagatcagccccacagttgccaacggagagccccagccaggcctggagagccag
ggacgagcagcctccatgccacgcctggctgctgaaacccagcccatcccggacacgagc
cccatgaagcgctcggtctccacgctggccccgcagcgcccccacgccatgcacctgtac
gagtattccttggagcggatgcctccggagcaaggccaccaccaccaccaccaccgctgc
caccggcgcaaggagaagaagcagaagtccttggatnnagggccgcccatcacttgcctg
atggacaagctggtgagtgctttgaaaggagggtttgtccctggaggagatgcacagccc
ctgtgttcttcttccaaggacaagaagcaggagcgtggccgctcccaggagaggaagcag
cactcctcctcctcctccgaaaagcagcgcttctactcgtgcgaccgctacggcagccgg
gaccgtgcccagcccaaatctgcggagcagagcaggcccacgtcccccaacgggggccca
gagcacggcccacacagacagggcagtggttcagttaatgggagccccttgctgtcgaca
tctggtgctagtaccccctgccggggtcggaggcagctcccacagactccactgacccca
cgccccagcatcacttacaagaccgctaactcctcgcccgtgcacttcaccactttccaa
acccccacgttctccccgggccgcctgagccgcgggctgtccgagcacaacgcgctgctg
cggggggatcagcagccgcccccgcccgccgtggcccgcatcgcccgcagcgcgccgcgc
ccgaggacacgctcaccttcgaggaggccgtggccaccaactcgggccgctcctcaagga
cttcctacgtctcctccctga
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integrated database retrieval system
