Sturnus vulgaris (common starling): 106856348
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Entry
106856348 CDS
T08833
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106856348 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
svg01009
]
106856348 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svg04131
]
106856348 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
svg03029
]
106856348 (RB1CC1)
Protein phosphatases and associated proteins [BR:
svg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106856348 (RB1CC1)
Membrane trafficking [BR:
svg04131
]
Autophagy
Autophagosome formation proteins
ULK complex
106856348 (RB1CC1)
Mitochondrial biogenesis [BR:
svg03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
106856348 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
106856348
NCBI-ProteinID:
XP_014737109
LinkDB
All DBs
Position
Unknown
AA seq
1597 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKHAIQTKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLLKFENVYSSYLQ
SIDDIKLKLTHLGSAVSIMAKIPLLECLTRHSYRECLGRLESSPEHGGTESEETEDGKSP
ELVLYPDVSKVNSKSMLASFCKSVEHSALEGTDPENVKDDKESGQNATVQDNEMSVELKD
DDQPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECHQTISKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESF
GKLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLSDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKASNSQASPQSATTPRIES
TTGTAIATSSRTPPSLSLQGPLCPPVCPPAPLEELSPDSIDAHTFDFETIAHPNLEQALK
QGSLDLDSLAESPESDFMSAVNEFVIENPVSPNVISDPQSPEMMVESLYSSVINAIDSRR
MQDTSSCVKDVSVENASLSVCVEKCRVIAQDSKVHLRNIKEDLCHFRTLVQREQCDFSNS
LKCTSLEIVNTIEKVKLALEKTLNDKHQNELQSLKSEYETKINKLLEDGEENKKKIKKLK
GDLLGLEEVLQNKNDEFAIVKNEKEAVVCLQNEKDQKLLELECQMETQNSEIKELRQSRE
IVLEDLKKLHVENKEKLQLLRAELESLEQSHLKELESNLQARHLQEFEKVLAEHKDCLDK
LNKENQHRLEQMQESHEVVMQEKQQQVEELQLKVSDLSDLRCKLEVELALKEAETDEMKL
LLEESRNQQQETLRSQIDKETESLRKEIDKLNNKIQISSDEYQVGLSELRTLMTIEKDQC
ISELVNRYEEESNLLRTELNKVTLLHQKTAEAEKRLSEQITELQSKLELEMSALEEEKKE
KLSLCEQQEKYEAIIHKLKEEKELLVSNHEQDRQLLIQKLNCEKEDAVQTACKELELQRE
AAEKGLLEKILQLEKQINQSPPAESSAESNLVAELQEKLQEEKMKFLEQLEEQEKRKNEE
MQNIRTSLTAEQQTNFNTVLAREKMKKENIINDLSDKLKVLTQQQEKDKDLIETLSEDRA
RLLEEKKKLEEEVNKLRSSNFSPSTYLAAVSEACGACAADVPTDTDRLVADFGAEGRMDS
TMETSMMAVHENVHMSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIA
IRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVLG
KVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4794 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatatgtatttttggtcaacactggaactacccttacatttgatactgaactt
gctgtacaaaatgtggctgatctgaaacatgcaattcaaacaaagtataagattgccatt
cagcaccaagtactggttgtcaatggtggagagtgtatggcaccagacagaagagtgtgt
agttacagtgctggaacagataccaacccaatttttttattcaacaaagaaatgattttg
tgtgaacgtccaccagctatccccaaaaccacattttcagcagagaatgagatggaattg
aaagtagaagaatctcttatgatgcctgcagtgtttcatacagtagcatcacgaacacag
cttgctgtggaaatgtatgaggttgccaagaagctttgctccttttgtgaaggtcttgta
catgatgaacatcttcagcatcaaggctgggctgccataatggccaacttggaagattgt
acatactcttaccaaaagctgcttctcaagtttgaaaatgtgtattcgagctatttgcag
tccatagatgatatcaaattgaaacttacacacttgggttctgctgtttctatcatggcc
aagataccattgctggagtgcctaacaagacatagttacagagagtgtttaggaagactg
gagtcttcacctgaacatggaggaacagaaagtgaagaaactgaggatgggaaatctcct
gaattggtgctttatcctgatgtatctaaagtgaacagtaaatcaatgttagcatcattt
tgcaagtcagttgaacattcagctttggaaggcacagatcctgaaaatgtaaaagatgat
aaggaatctggtcaaaatgctactgttcaagacaatgaaatgtcggtagaattgaaagat
gatgatcagccttccttcaatgtgtctttgttagactggataaatgttcaagatagacct
aatgatgttgaatccttggtcagaaaatgttttgattccatgagcaggcttgatccaagg
atcatccaaccctttctggcagaatgtcaccaaactatctccaaactagataatcagaac
atgaaggctattaaaggtcttgaggatagactctatgcattggaccagatgatagcaagc
tgcagcagactggtgaatgaacaaaaagaacttgctcagggatttttggctaatcagaag
agagctgagaacttgaaagatccttctgtgctgcctgatttgtgtttgagtcatgcaaat
cagctgatgattatgttaactaatcacagaaaactgttagatattaaacagaaatgtacc
actgccaaacaggagcttgcaaataatctgcaagtcagactgaaatggtgttgttttgta
atgcttcatgctgaccaagatggagagaaactgcaagcactgcttcgtcttgtaacagag
ctcctagaaagggtcaaagttgtagaagctctcagcactgttcctcagatgtactgttta
gctgttgttgaggttgtgaggagaaaaatgttcataaaacactacagggagtgggcaggt
gctttaataaaagatgggaaacatctctatgaagctgaaaaggcaaaaagggaatctttt
ggtaaactctttaggaagtcttttctaaggaatcgtttgtttagaggacttgactcctgg
cccccatccttttgtacacgaaaacctcgcagatttgacagtgagcttccagatatctca
ttgagtgacttgcagtttttgcagtctttctgcccttcagaagtacagccgttactcagg
gttcccatactttgtgactttgaacctcttcaccagcatgtacgtgctctacataacctg
gtcaaggcagcacagagtttggatgaaatgtcacaaaccattacagacctgctgaatgaa
caaaaggcctccaatagccaagcatcgccacaatctgctaccacaccaaggatagaaagt
actacaggaactgcaattgctacctcttcaagaactcctccatcactcagtcttcagggt
cccctgtgtcctcctgtgtgtcccccagctccattagaagaattgtctccagacagcatt
gatgctcacacgttcgattttgaaactattgcccatccgaacttggagcaagctcttaag
caaggatcattagacttggattcattagcagagagtccagaatctgactttatgtcagca
gtaaatgaatttgtaatagaaaatccagtgtctcctaatgtaataagtgacccacaaagc
ccggaaatgatggtggaatctctttattcttcagttatcaatgcaatagacagtagacgt
atgcaagatacaagttcttgtgtaaaggatgtttcagtagaaaatgcttctctcagtgtt
tgtgtggagaagtgtagggttattgctcaagactcaaaggtacatttaagaaatataaaa
gaagatctttgccatttcagaacacttgtacagagagaacagtgtgacttttctaattct
ttaaaatgtacttccttagaaatagtaaatacgattgaaaaggtaaaacttgcacttgaa
aaaacactaaatgataaacatcagaatgaattgcagtctttgaaaagtgagtatgaaact
aaaattaataaattattggaggatggtgaagaaaataaaaagaaaattaaaaagttaaaa
ggggatctgttaggccttgaggaagttcttcagaataagaatgatgaatttgcaatagta
aagaatgagaaagaagctgtagtttgccttcagaatgaaaaagaccagaaattacttgaa
ttggaatgccaaatggagacacaaaattctgaaatcaaggaactgaggcagtcacgtgaa
atagtacttgaagacttgaaaaaacttcatgttgaaaacaaggagaaactacaactcctg
agggcagaacttgagagtttagagcaaagccatttaaaagaactggaaagcaacctacaa
gccaggcatttacaggaatttgagaaggtcctagctgagcacaaggattgtttggataaa
ttaaataaagagaaccagcatagacttgaacaaatgcaggaatctcatgaggtagttatg
caagagaagcaacaacaagtagaagagttacaactcaaggtttcagatctgtctgatttg
aggtgcaaactagaagttgaacttgccctgaaagaggcagaaactgatgaaatgaagctt
cttttggaagaaagcagaaaccagcaacaagagaccttaagatcgcagattgacaaagaa
actgaaagcttaagaaaggagatagacaaattaaacaataaaatacaaatcagcagtgat
gaatatcaagtgggcttatcagaactaaggactctgatgacaattgagaaagatcagtgt
atttcagagctagtaaataggtatgaagaagaatcaaatttgcttagaactgaattaaat
aaagtaactcttcttcatcaaaaaactgctgaggcagaaaaaagactttcagagcaaata
acagaactgcaaagtaagttagagttggaaatgagtgccctagaggaggaaaaaaaagaa
aaattatctctctgtgagcagcaggaaaaatatgaagctattatccataagctaaaggaa
gagaaagaactgttagtatctaaccatgaacaagacaggcagttgctcattcagaagctc
aattgtgaaaaagaggatgcagtacaaactgcttgtaaagagttggaattgcagagggaa
gctgctgaaaaagggcttttggaaaaaatactacaacttgagaagcaaataaatcagagt
cctcctgctgaatcatctgctgaatcaaacttagtcgctgaacttcaggagaagcttcag
gaagaaaaaatgaagttcttagagcaacttgaagaacaagagaaaaggaagaatgaagaa
atgcagaacatcagaacatcactcactgcagagcagcagaccaactttaacactgttctg
gcaagagagaaaatgaaaaaagaaaacataattaatgatcttagtgataaattaaaagtg
cttacgcaacagcaagaaaaagataaggatttgattgaaacgctttctgaagatcgagct
cgcttacttgaagagaagaagaagcttgaagaagaagttaataaactgagaagtagtaat
ttttctccatcaacctacttggcagcagtatcagaagcttgtggagcctgtgcagctgat
gtgcccactgacacagacagattggttgctgactttggggctgaagggagaatggactcc
acgatggaaaccagtatgatggctgtgcatgaaaatgttcatatgtctgaagaaaagcag
aggataatgttgttagaaagaactttgcagttgaaggaagaggaaaataagagattaaat
caaagattgatgtcccaaagcatgtcgtcagtatcctcaagacattctgaaaaaatagca
attagagattttcaggttggcgatttggttctcattatcttggacgaaaggcatgacaac
tacgtgttgtttactgttagtccaaccttgtatttcttgcactcagagtcccttgctgca
ttggatctcaaaccaggtgagtgtgcatcaggtgcatctaggagaccttgggtgctagga
aaagtgatggaaaaggaatattgccaggcaaaaaaggcacaaaacagattcaaagttcct
ttgggtacaaaattctacagagtgaaagcagtaccatggaacaagaaagtataa
DBGET
integrated database retrieval system
