Sturnus vulgaris (common starling): 106856404
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Entry
106856404 CDS
T08833
Symbol
PRDM2
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg00310
Lysine degradation
svg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
106856404 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svg03000
]
106856404 (PRDM2)
03036 Chromosome and associated proteins [BR:
svg03036
]
106856404 (PRDM2)
Enzymes [BR:
svg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
106856404 (PRDM2)
Transcription factors [BR:
svg03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
106856404 (PRDM2)
Chromosome and associated proteins [BR:
svg03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
106856404 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-H2C2_2
zf-C2H2_ZNF462_1st
zf-C2HE
zf-C2H2_11
zf-MYST
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
106856404
NCBI-ProteinID:
XP_014737183
LinkDB
All DBs
Position
Unknown
AA seq
1663 aa
AA seq
DB search
MNQTTTDSPVAVETLDDVPEHVLRGLPEDVRLFPSAVDKSRLGVWATKSILKGKKFGPFV
GDKKKRSQVKSNVYMWEVYYPNLGWMCVDATDPEKGNWLRYINWARSGKEQNLFPLEINR
TIYYKSLKPIAAGEELLVWYNGEDDPAIAAAIEEERASARSRRHSPKARRGKKKTQEGKN
KGKKAADTKQKKIDLDSTSADMRDSKEGHKEEDETPSVSAVLSLEQTAVIQEMVNQDVLP
KLMIPSPTNEPQVVSEDKQGEAINCASDDLDDDEEDDEEEEDEEEMEDTNMPKENAEMPL
MCEEKLDSLEEQKSTSEESPESSPKKKLVVKIPKAQGESNGDVQETFMFPCQHCERKFTT
KQGLERHMHIHISTLSHAFKCRYCGKAFGTQINRRRHERRHEAGPKRKPFLTLTSSQHLE
NVADNQVIVDDGLKDDLNVPTLVQDSVVLDSEKVSQEMSNSAFAEENKEPKELHPCKYCK
KVFGTHTNMRRHQRRVHERHLIPKGVRRKGFFTEEPPLPTEPAPAVQSAYIANTEIEEEG
EGDDVYLMDISSNISENLNYYIDGKIQSNSNTSNCDVIQMESNSADLYGLNCIISPVTVE
ISSNLKVTQTHVNEPAKEPSSSGSSESKKRRTASPPLVPKIKTEIDPEPITPTSSLNLPL
TISTESLAFPKEKGVYLSSKLKQLLQTQDNKKITPSSEIPKIGPSVTSSPILPPVSSRFK
RRTSSPPSSPQHSPVLRDFVKTGEGKTVWNDNIRSSKMPKLESHSNSPAWSLTAREDKET
LSPLCFEEYKISKDWTAAPTFGNVCNQQPLDLSSGMKQRSDVKSKTQVPWESVLDLSVHK
KPCSDAEIREYKENSTQPTCSGVKKKKPTTCMLQKVLLNEYNGTDAALDSALGVDSAGSP
GKALEPPAEPEADPCPSASSSTDTQPLSSSASPVPQAPAAPAVCQLPPLLTPTNPPSPPP
CPPVLTVATSPPPLLPTMPLPIPDVSASATNTSSCPSPLSNTTTQSPLPVLSPTVSPSPS
PVPSVEPLISAASPGPPTLSSSSSSSSSSSFSSSSSSSSPSPPPLSVVSSVVSSADNLES
SLPIIKQEEAESEQQKAREDPHTSSQSGAVQETFNKSFVCNVCESPFLSIKDLTKHLSIH
AEEWPFKCEFCVQLFRDKTDLSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQHQRDLHPD
KECSHHEFESGTLRPQNFTDPSKANVEHMQSLPEDSLEPSKEEEDEDLNDSSEELYTTIK
IMASGVKSKDPDVRMGLNQHYPSFKPPPFQYHHRNPMGIGVTATNFTTHNIPQTFTTAIR
CTKCGKSVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPKNGMVVIAGPGKNAF
RRMGQPKRLNFNVEISKMSSNKLKISALKKKNQLVQKAILQKKKSAQQKAELKNNSSETD
SHICPYCNREFTYIGSLNKHASYSCPKKPISPSSKKNSSKKSAASSPANSDKGSNQRRRT
ADAEIKMQSTQPHLGKTRARTSGPAQLQLPSASFKSKQNVKFVPSIRSKKPNSSSSLRNS
SPVRVSKMSHVDGKKTKVVSKNNSSGISSKASRKLHVRIQRNNKAVLPSKSVASKKKADR
FSVKSRERIGGPITRSLQQAANAEAAENKRDESSTKQELKDFR
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagaccacaactgactcccctgttgctgtggagaccttggatgatgttcctgag
cacgtgctgaggggccttcctgaggatgtgaggctcttcccatctgctgttgacaagagt
cggcttggtgtctgggcaacaaagtcaattttgaaaggcaagaagtttggaccatttgtt
ggtgataagaaaaaaagatcacaagttaagagcaatgtgtacatgtgggaggtgtattac
cccaacctgggctggatgtgtgtggatgccaccgaccccgagaagggcaactggctgcgt
tacatcaactgggctcgctcgggcaaggagcagaatctctttcccttggaaatcaacagg
accatttactacaagagtttgaagccaatcgcggcgggcgaggagcttttggtgtggtac
aatggcgaggacgacccggcgatagcggccgcgatcgaggaggagcgagcgagcgcccgc
agccgccggcactccccgaaggcccgcagaggaaagaagaagactcaggaaggtaaaaac
aagggaaagaaggcagcagatacgaaacagaaaaagattgatttggattctacttctgca
gatatgagggattctaaagagggtcataaagaggaagatgaaacaccttctgtttctgct
gtgctgtctctggaacaaacagctgtgattcaggaaatggtaaatcaagatgtacttcca
aagctgatgatccccagtccgaccaatgagccacaagtggtaagtgaagacaaacaagga
gaagcaataaattgtgcatcagatgatttagatgacgatgaagaggacgatgaagaagag
gaagatgaagaggagatggaagataccaatatgcctaaagaaaatgctgaaatgcctttg
atgtgtgaagaaaagttggactccttggaagaacaaaagagcacgtcagaggaatctcca
gaaagctctccaaagaaaaaactcgtggtgaaaattccaaaagcacagggggaatccaac
ggtgacgttcaggaaacattcatgtttccctgccagcattgtgagaggaagtttacaaca
aagcaggggctggagcgccacatgcacatccacatctccacactgagccacgcgttcaag
tgccggtactgcgggaaagccttcggcactcagatcaacaggcgcaggcacgagcgacgc
cacgaggccgggccgaaaaggaaacccttcctgacactgacctcgtcacagcacttggag
aatgttgctgataaccaagtgattgtggatgatggtcttaaagatgacctgaacgttccc
actcttgtgcaagactctgttgtcttggattctgagaaagtttcccaggaaatgtcaaac
tctgcatttgctgaggaaaataaggagcccaaagaattgcatccatgcaaatactgcaaa
aaggtgtttggtactcacaccaacatgcgcaggcatcagcggagggttcacgaacgtcat
ctgattcccaaaggtgtcagaagaaaagggttcttcactgaagagccacctctcccaaca
gagcctgccccagcagtccagagtgcgtacatagccaacacagaaatagaagaggaaggt
gaaggggatgatgtctatcttatggatatatccagcaatatctccgagaatttaaattac
tacatcgatggcaaaattcagtccaacagcaacactagcaattgtgatgtgattcagatg
gagtccaactctgcagacttgtatggattgaactgtatcatcagtcctgtcacagtagaa
atttcctcaaatttaaaggttacacaaacacatgtgaatgaacctgctaaggagccctct
agcagtgggagcagtgaatccaaaaagagaagaactgctagccctcctcttgtaccaaaa
ataaaaactgaaatagacccagaacctataactcctactagttcattaaatcttcctctt
accatttcaacagaaagcttagcttttcctaaagaaaaaggggtttatttgtcatcaaaa
ttaaagcagctccttcagacacaggacaataagaagataactccatcaagtgaaatccct
aaaataggaccgtctgttacatcatcgcctattttgcctccagtatccagcagatttaaa
agaaggaccagctctcctcccagttctccacagcacagcccagtgcttcgagactttgtc
aaaacaggtgagggaaaaactgtgtggaatgataatattcggagttcaaaaatgccaaag
ttagaaagccacagcaactcacctgcttggagcttgactgcaagggaggacaaagagact
ttgagccctctttgctttgaagaatataaaatatcaaaagactggacagcagctccgact
tttggcaacgtgtgcaaccagcagccactggatttatccagtggtatgaaacaaaggtct
gatgtcaaaagcaagactcaggttccctgggaatccgttttagatctaagtgtgcataag
aagccttgcagcgatgctgaaattagagaatacaaagaaaactccacacagccaacgtgt
agtggtgtgaagaagaagaaacccaccacgtgcatgctgcagaaggttctgctgaacgag
tacaacgggacagatgcagccctggacagcgcgctgggcgtggacagcgccggcagcccc
ggcaaggccctggagcctccggcagagcccgaggcagatccctgtccctcggcatcgtct
tccactgacactcagcccctcagctcctctgcttcccctgtgccacaggcccctgctgca
cctgctgtgtgccagctgcctccattgttaacgcccaccaaccccccgtccccgccgccc
tgcccgcccgtgttaacggtggccacctcacctccccccctgctcccgacgatgccctta
cccattccagatgtctctgccagtgccactaacacttcctcctgtccctcgccactctcc
aacactactacccaatccccactaccagttctttcgcctacagtttctccttctccatcc
cctgtcccttctgttgaacctcttatttctgctgcttcacctggcccccctacgctctct
tcctcctcttcctcctcctcatcctcctctttctcatcctcttcctcctcatcgtcccca
tctccacctcctctttctgtagtttcttctgttgtttcctctgctgataaccttgaaagt
tctctcccaataataaagcaggaagaagctgaaagcgagcagcagaaagcaagagaagat
cctcatacttcaagtcaatcaggagcagtgcaggaaacgttcaacaagagctttgtgtgc
aatgtctgcgaatcaccttttctttccattaaagacctaacgaagcatttatccattcat
gctgaagaatggcccttcaaatgtgaattctgtgtacagctttttagggataaaacagac
ttgtcagaacatcgctttctgcttcatggagtagggaatatctttgtttgttcagtgtgt
aaaaaggaatttgcttttttgtgcaatttgcaacagcatcaacgggatctccatccagac
aaagagtgctcacatcatgagtttgaaagtgggactttgagaccccagaattttactgac
cccagtaaggcgaacgtggagcacatgcagagcctgccagaagattctttggaaccttcc
aaagaggaggaagatgaagatcttaatgattcttctgaagagctttatactactataaaa
ataatggcttctggggtgaaatctaaagatccagatgttcgtatgggcctcaatcaacac
tacccaagctttaaaccacctccgttccagtatcaccatcgtaatcctatgggtattgga
gttactgcaacaaacttcacaacccacaatatcccacagacttttactactgccattcga
tgcacaaaatgtggaaaaagtgttgataacatgcctgagttacacaaacacatactggcc
tgtgcatctgctagtgataaaaagagatacacccctaaaaaaaatccagtacccctcaaa
cagacagtgcagcctaagaatggcatggtggttattgctgggcctgggaagaacgccttc
agacgaatgggtcagcctaagagactcaatttcaatgttgagattagcaaaatgtcctcc
aataaactaaaaataagtgcattgaaaaagaaaaaccagcttgtccagaaagctatcctg
caaaaaaagaaatctgcccagcagaaggcagaactgaaaaataattcatctgagacggac
tctcacatctgcccctactgtaacagagagttcacttacattgggagtttgaacaaacac
gcatcatacagctgccccaaaaaacccatctctccctcctccaaaaagaattcttccaaa
aaaagtgcagcttcttcacctgccaacagtgacaaaggcagcaaccagcgcaggagaaca
gcagatgcagaaatcaaaatgcagagcactcagcctcacctgggcaagacgagagcacga
acctcaggacctgcacagctccagctcccctctgcctccttcaagtccaaacaaaacgtt
aaatttgttccttccatacgatctaaaaagccaaattcatcttcatcgttgaggaactct
agtcctgtaagagtgtctaaaatgtcccatgttgatgggaaaaaaactaaggtggtttct
aagaacaattcctctggaatctccagcaaagcgtcccggaaattgcacgtcagaatacaa
aggaataataaagctgttttgccaagtaaatctgtggcgagtaagaaaaaggcagacagg
ttcagtgtaaaatctagagagaggattggaggaccaatcactcggagcctgcagcaggca
gcaaatgcagaggcagcagaaaacaaaagagatgaaagcagtacaaagcaagaactaaaa
gatttcaggtaa
DBGET
integrated database retrieval system
