KEGG   Sturnus vulgaris (common starling): 106856410
Entry
106856410         CDS       T08833                                 
Symbol
EXOSC10
Name
(RefSeq) exosome component 10 isoform X1
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
svg  Sturnus vulgaris (common starling)
Pathway
svg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:svg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106856410 (EXOSC10)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:svg03019]
    106856410 (EXOSC10)
Messenger RNA biogenesis [BR:svg03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     106856410 (EXOSC10)
SSDB
Motif
Pfam: DNA_pol_A_exo1 PMC2NT HRDC CDK5_activator TFIIA
Other DBs
NCBI-GeneID: 106856410
NCBI-ProteinID: XP_014737191
LinkDB
Position
Unknown
AA seq 870 aa
MSALPGFDSPDAFVKYALSTVVAATKASNGLPQPGDEYDFYCSFPGFRAYCKTQGDRLLR
CMSQVMQYHGCRSLTKDSSKVTGLEDKFDMLVDSNDVILERVGILLDEASGVNRNQQPVL
PAGLQPPQMIVSSWNRKAGEFHKRTQSETFRLLHAKNISRPQLKFREKIDNSNTPFVPKL
FIKPNALKPLPEALTKSGRQRKERPEDLDVPAALADFIHQQRTQKTEQDMFAHPYQYELE
HFSPPDGVLKKPDLQMYRPIEETPCHFITTLDELAELNEKLMTCKEFALDLEHHSYRSFL
GLTCLMQISTRTEDFIIDTLELRSDMNILNETFTDPAIVKVLHGADSDVEWLQRDFGLYL
VNVFDTHQAARLLNLGRHSLDHLLKLYCNVDADKKYQLADWRIRPLPEEMIRYARDDTHY
LLYIYDKMRELLWERGKEQPTQLQVVWQRSRDICLKKYIKPLFTDESYLDLYRKQKKHLD
TQQLAAFRLLFAWRDKIARQEDESTGYVLPNHMLLKIAEELPKESQGIIACCNPVPPLVR
QQINELHLLVQQAREMPLVKSEITVAAKKRAPPPIPEKLENALFGPHDSSRIPMDDFQNN
SALDPAPVLEDVCLFSDGEKTMGIQDGQPESACLVATTTVSIFSECDENEGHKRTLTTAQ
RKAQLIMESFENPFKMYLPPEENSAYVSQSAKFDPSSKIYEISNRWKLMSQAPVQKKSLN
ETNKKAAQQSAAHVQTQKVQKKAAQEVVSVRQQAMQEQANRKRERDTNEMGAETGPELPT
QEKKRQKTPQQPEELEAPRQFTPFDYSNSNFKVFAGSSKSKQSPQFDPAKQAHTGKKFAG
TNKLQQSGNRSMSYLAGKAERGSTHHWPKR
NT seq 2613 nt   +upstreamnt  +downstreamnt
atgtcggccctgcccggcttcgacagccccgacgcctttgtcaagtacgctctcagcaca
gtggtggctgcaacaaaggcatcaaatgggctcccccagcctggtgatgagtatgatttc
tactgcagcttccctggcttccgtgcatactgcaaaacacagggggaccgcctgctccgc
tgcatgagccaggtgatgcaataccatggctgcaggagcctcacgaaagattccagcaaa
gtgacagggctggaagataaatttgatatgctggttgactccaatgatgtcattctagaa
agagtgggtattttattggatgaagcatcaggagtgaacagaaaccagcagccagtcctg
ccagctgggttacagcccccacagatgatcgtttccagctggaatcgtaaggcaggagaa
ttccacaagagaactcagtctgaaacattccggctgcttcatgccaagaatatttctcga
ccacagcttaagtttcgtgaaaagattgacaattccaacactccctttgtacctaaactt
tttatcaaaccaaatgctttgaagcctttgcctgaagccctcacaaaaagtggacggcag
agaaaggagcgccctgaagacttggatgtaccagctgctttggcagacttcatacatcag
cagaggacacagaaaactgagcaagacatgtttgctcacccttaccagtatgaactggag
catttttctccaccagatggagttctcaaaaaacctgacctccagatgtacaggcccatt
gaggaaacaccctgtcattttatcaccacactggatgagttggcagaactaaatgaaaag
cttatgacttgtaaagaatttgccttggacttagagcatcactcctacaggagcttcctt
ggcctgacatgtctgatgcagatttccacccgaacagaagatttcattattgatacactg
gaactgcgcagtgacatgaacatcctcaatgagaccttcacagaccctgcaattgtgaag
gtccttcatggtgctgattcagatgtggaatggctgcaaagagactttggtctgtacttg
gtgaatgtgtttgatactcaccaagctgctcgtctcctcaatcttggcagacattctttg
gaccacttgctgaagctgtattgcaatgtcgatgctgacaagaagtaccagctggctgac
tggaggatacgccctttgccagaagaaatgatccggtatgcccgtgatgacactcactac
ttgctctacatctatgacaaaatgagagagttgctgtgggagagagggaaggagcagccc
acccagctgcaggttgtgtggcagcgcagcagggacatctgcctgaagaaatacatcaag
cccctctttacagatgaatcctaccttgatctctacaggaagcagaaaaaacaccttgat
acccagcagctggcagcatttaggctgctgtttgcatggagagacaagatagcacggcaa
gaggatgagagcacaggatatgtgctaccaaatcatatgctgttgaagatcgcagaggag
ctgcccaaagaatcccagggtatcattgcttgctgtaaccctgtcccaccacttgttcgc
cagcagattaatgaattgcatctgctcgttcagcaggcccgggagatgcctcttgtcaag
tcggagattactgtggcagccaaaaagagagcacctccacccatccctgagaagctggag
aatgccctctttggaccacatgacagttcacggattcctatggatgattttcagaataac
tctgccttggaccctgcaccagttttggaagatgtttgtctcttttcagacggtgagaag
acaatgggtattcaagatggtcagcctgagtcagcctgtcttgttgctactaccactgtc
agcatattcagtgaatgtgatgaaaacgaaggacataagaggactttaaccactgcacag
cgaaaagctcagctaataatggagtcctttgaaaatccatttaaaatgtatctacctcca
gaggagaattctgcctatgtctctcaatctgcgaagtttgacccatcatcaaaaatttat
gaaatcagcaatcgatggaagttgatgagtcaggcaccagtacagaagaagtccttgaac
gaaaccaataagaaagcagcccagcagtcagctgcccatgtccagacacagaaggtgcag
aaaaaggcagcacaagaagttgtgtctgttcgtcagcaagccatgcaagaacaagctaat
aggaagagggagagagacacaaatgaaatgggagcagaaacaggaccagagttgccaaca
caagaaaagaaacggcaaaaaaccccccagcaaccagaggagctggaagcaccgaggcag
ttcaccccctttgattacagcaattccaacttcaaagtgtttgcaggaagcagcaaatca
aaacagtcaccacaatttgatcctgccaagcaagctcacacaggcaagaaatttgctgga
actaacaaacttcaacagtctggaaaccggagcatgtcctacctggcggggaaagctgaa
aggggttccacacaccactggccaaagagataa

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