Sturnus vulgaris (common starling): 106856410
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Entry
106856410 CDS
T08833
Symbol
EXOSC10
Name
(RefSeq) exosome component 10 isoform X1
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106856410 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svg03019
]
106856410 (EXOSC10)
Messenger RNA biogenesis [BR:
svg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
106856410 (EXOSC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
CDK5_activator
TFIIA
Motif
Other DBs
NCBI-GeneID:
106856410
NCBI-ProteinID:
XP_014737191
LinkDB
All DBs
Position
Unknown
AA seq
870 aa
AA seq
DB search
MSALPGFDSPDAFVKYALSTVVAATKASNGLPQPGDEYDFYCSFPGFRAYCKTQGDRLLR
CMSQVMQYHGCRSLTKDSSKVTGLEDKFDMLVDSNDVILERVGILLDEASGVNRNQQPVL
PAGLQPPQMIVSSWNRKAGEFHKRTQSETFRLLHAKNISRPQLKFREKIDNSNTPFVPKL
FIKPNALKPLPEALTKSGRQRKERPEDLDVPAALADFIHQQRTQKTEQDMFAHPYQYELE
HFSPPDGVLKKPDLQMYRPIEETPCHFITTLDELAELNEKLMTCKEFALDLEHHSYRSFL
GLTCLMQISTRTEDFIIDTLELRSDMNILNETFTDPAIVKVLHGADSDVEWLQRDFGLYL
VNVFDTHQAARLLNLGRHSLDHLLKLYCNVDADKKYQLADWRIRPLPEEMIRYARDDTHY
LLYIYDKMRELLWERGKEQPTQLQVVWQRSRDICLKKYIKPLFTDESYLDLYRKQKKHLD
TQQLAAFRLLFAWRDKIARQEDESTGYVLPNHMLLKIAEELPKESQGIIACCNPVPPLVR
QQINELHLLVQQAREMPLVKSEITVAAKKRAPPPIPEKLENALFGPHDSSRIPMDDFQNN
SALDPAPVLEDVCLFSDGEKTMGIQDGQPESACLVATTTVSIFSECDENEGHKRTLTTAQ
RKAQLIMESFENPFKMYLPPEENSAYVSQSAKFDPSSKIYEISNRWKLMSQAPVQKKSLN
ETNKKAAQQSAAHVQTQKVQKKAAQEVVSVRQQAMQEQANRKRERDTNEMGAETGPELPT
QEKKRQKTPQQPEELEAPRQFTPFDYSNSNFKVFAGSSKSKQSPQFDPAKQAHTGKKFAG
TNKLQQSGNRSMSYLAGKAERGSTHHWPKR
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccctgcccggcttcgacagccccgacgcctttgtcaagtacgctctcagcaca
gtggtggctgcaacaaaggcatcaaatgggctcccccagcctggtgatgagtatgatttc
tactgcagcttccctggcttccgtgcatactgcaaaacacagggggaccgcctgctccgc
tgcatgagccaggtgatgcaataccatggctgcaggagcctcacgaaagattccagcaaa
gtgacagggctggaagataaatttgatatgctggttgactccaatgatgtcattctagaa
agagtgggtattttattggatgaagcatcaggagtgaacagaaaccagcagccagtcctg
ccagctgggttacagcccccacagatgatcgtttccagctggaatcgtaaggcaggagaa
ttccacaagagaactcagtctgaaacattccggctgcttcatgccaagaatatttctcga
ccacagcttaagtttcgtgaaaagattgacaattccaacactccctttgtacctaaactt
tttatcaaaccaaatgctttgaagcctttgcctgaagccctcacaaaaagtggacggcag
agaaaggagcgccctgaagacttggatgtaccagctgctttggcagacttcatacatcag
cagaggacacagaaaactgagcaagacatgtttgctcacccttaccagtatgaactggag
catttttctccaccagatggagttctcaaaaaacctgacctccagatgtacaggcccatt
gaggaaacaccctgtcattttatcaccacactggatgagttggcagaactaaatgaaaag
cttatgacttgtaaagaatttgccttggacttagagcatcactcctacaggagcttcctt
ggcctgacatgtctgatgcagatttccacccgaacagaagatttcattattgatacactg
gaactgcgcagtgacatgaacatcctcaatgagaccttcacagaccctgcaattgtgaag
gtccttcatggtgctgattcagatgtggaatggctgcaaagagactttggtctgtacttg
gtgaatgtgtttgatactcaccaagctgctcgtctcctcaatcttggcagacattctttg
gaccacttgctgaagctgtattgcaatgtcgatgctgacaagaagtaccagctggctgac
tggaggatacgccctttgccagaagaaatgatccggtatgcccgtgatgacactcactac
ttgctctacatctatgacaaaatgagagagttgctgtgggagagagggaaggagcagccc
acccagctgcaggttgtgtggcagcgcagcagggacatctgcctgaagaaatacatcaag
cccctctttacagatgaatcctaccttgatctctacaggaagcagaaaaaacaccttgat
acccagcagctggcagcatttaggctgctgtttgcatggagagacaagatagcacggcaa
gaggatgagagcacaggatatgtgctaccaaatcatatgctgttgaagatcgcagaggag
ctgcccaaagaatcccagggtatcattgcttgctgtaaccctgtcccaccacttgttcgc
cagcagattaatgaattgcatctgctcgttcagcaggcccgggagatgcctcttgtcaag
tcggagattactgtggcagccaaaaagagagcacctccacccatccctgagaagctggag
aatgccctctttggaccacatgacagttcacggattcctatggatgattttcagaataac
tctgccttggaccctgcaccagttttggaagatgtttgtctcttttcagacggtgagaag
acaatgggtattcaagatggtcagcctgagtcagcctgtcttgttgctactaccactgtc
agcatattcagtgaatgtgatgaaaacgaaggacataagaggactttaaccactgcacag
cgaaaagctcagctaataatggagtcctttgaaaatccatttaaaatgtatctacctcca
gaggagaattctgcctatgtctctcaatctgcgaagtttgacccatcatcaaaaatttat
gaaatcagcaatcgatggaagttgatgagtcaggcaccagtacagaagaagtccttgaac
gaaaccaataagaaagcagcccagcagtcagctgcccatgtccagacacagaaggtgcag
aaaaaggcagcacaagaagttgtgtctgttcgtcagcaagccatgcaagaacaagctaat
aggaagagggagagagacacaaatgaaatgggagcagaaacaggaccagagttgccaaca
caagaaaagaaacggcaaaaaaccccccagcaaccagaggagctggaagcaccgaggcag
ttcaccccctttgattacagcaattccaacttcaaagtgtttgcaggaagcagcaaatca
aaacagtcaccacaatttgatcctgccaagcaagctcacacaggcaagaaatttgctgga
actaacaaacttcaacagtctggaaaccggagcatgtcctacctggcggggaaagctgaa
aggggttccacacaccactggccaaagagataa
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