Sturnus vulgaris (common starling): 106856545
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Entry
106856545 CDS
T08833
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
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]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106856545 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svg03019
]
106856545 (BARD1)
04121 Ubiquitin system [BR:
svg04121
]
106856545 (BARD1)
03036 Chromosome and associated proteins [BR:
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]
106856545 (BARD1)
03400 DNA repair and recombination proteins [BR:
svg03400
]
106856545 (BARD1)
Messenger RNA biogenesis [BR:
svg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
106856545 (BARD1)
Ubiquitin system [BR:
svg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
106856545 (BARD1)
Chromosome and associated proteins [BR:
svg03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
106856545 (BARD1)
DNA repair and recombination proteins [BR:
svg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
106856545 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
zf-RING_6
Ank_4
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
NIBRIN_BRCT_II
RTT107_BRCT_5
ANK_LRRK2
zf-C3HC4_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
106856545
NCBI-ProteinID:
XP_014737454
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MREALRGRSGNQPAPSSPLCPPAPSMAQPWSHTRAALGRLERCRVSPCSAHSTGVLREPV
SLGQCEHVFCLCCVSDCVGTECPVCHMPAWVQDAQINRQLDNMIQLCSKLRQLLGTGTSD
SAEVTCTPTDSDLGKKSKKEQIKMWFSPRSRKIRCVVNRSHAKTKNNDLGQDTSSVYDFF
PSPPHEEPSKPTKRPTQKQTKKMKKKHLADINKKWSLEKPEQKRVEKTPKEKCVTICSQP
VVLCTQEPESPEERPQQESVKEADSCSNTEDVEVPPQVESPEKKDDSEVVCSARDSQEKN
RAAETLLSIATEVTPLKRGREQSGLQGSPQSKRARRSERSIPGKSDRQANGLEESLQGSP
VSPATEQTPVQISCSASKLTDTGMKTRRSAALQAINSPSLSESPSTPSTSKTCSQATTLS
PSVLKSPEVNPIARRNYKGETLLHVASIKGDLAAVEQLLKNGADPNVKDNAGWTPLHEAC
NHGHREVVELLLQHRALVNTTGYQNDSPLHDAARNGHEPIVELLLLHGASRDAVNIFGLR
PVDYAESEKMKSVLMLPVKNESFAQPSEALSSSQPRNGPLGILGSNLSAEQQKLLNKLAA
VLKAQRCTEFNSRVTHLVIPDVPMPTTVKCMMALLTGCWVLKFEWVQACLQSSAREQEEK
YEVQGGPRRGRLNREQLLPKLFDGCYFYFLGPFKQHQKSDLLELVKAAGGQVLVRQPKPD
SDVTQTINTVAYHAEPSSDQRLCTQYVIYDVASKFQPDKIRQGKVWMAPSSWLIDCVMAF
QLLPVK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgagggaggcgctgcgcggacgctcgggcaaccagccggccccgagcagccctctgtgc
ccccccgccccctccatggcgcagccctggtcccacacccgcgccgcgctggggcggctg
gagaggtgccgcgtttctccttgctctgcccacagcaccggcgtcctgcgggagcccgtg
tccctggggcagtgcgagcacgtcttctgcctgtgctgtgtgagtgactgtgttggcacc
gagtgccccgtgtgccacatgccagcctgggtgcaggacgctcagatcaaccggcagctg
gataatatgatccagctgtgcagcaagctgcggcagctcctgggcactggcacctcagat
tcagcagaagttacatgcacaccgactgactcagatttgggaaaaaagagcaagaaggag
cagataaaaatgtggttcagcccaagaagcaggaagattcggtgtgtggtgaacaggagt
catgctaagactaaaaacaatgaccttggtcaagacacatcttcagtttatgatttcttt
ccttcccctcctcatgaagagccctccaagccaacaaaaagaccaacccagaaacagact
aagaagatgaagaagaaacatctagcagacattaacaaaaagtggagcttagagaaacct
gagcagaaaagggtggagaagactcccaaggaaaagtgtgtgaccatctgcagtcagcca
gtagtgctgtgcactcaggagccagagagtcctgaagaaagacctcagcaggagtctgta
aaggaagctgactcctgcagtaatacagaagatgtggaagttccaccacaggtagaatcc
ccagagaagaaagatgacagtgaggttgtgtgctctgcacgagatagccaggaaaaaaat
cgtgctgcagagacattgctgtcaatagcaactgaagttacacctttgaaacgtggaagg
gagcagtctggacttcagggtagtcctcagtccaagagagcaaggagaagtgagaggagc
attcctgggaagtcagacaggcaggccaatggcctggaggagtcactgcagggctccccc
gtctccccagccactgaacagacaccagttcagatttcttgctctgcatccaaactcact
gacactggaatgaagacgaggagatctgcagcccttcaagcaatcaacagtccttcactt
tcagaatctccctccaccccatccacttctaaaacctgcagtcaggcaacaacactcagt
ccttctgtgttgaaatcccctgaggtcaacccgattgccagaaggaattacaagggagag
actttgctccatgttgcttccatcaagggtgacttagcagctgtggagcagctgctgaaa
aatggggcagatcccaatgtcaaagataatgctggctggacaccactgcacgaggcgtgt
aaccacgggcacagggaggtggtggagctgctgctgcagcaccgggctctggtgaacacc
acgggctaccagaacgactcccccctgcacgacgccgccaggaacggccacgagcccatc
gtggagctgctgctgctgcacggcgcctcccgggatgcagttaatatatttggtctgcgg
cctgtggactatgcagaaagcgagaagatgaaatctgtgctaatgttaccagtgaagaat
gaatcatttgcccagccctctgaggcactgagctccagccagccaagaaatggacccctt
ggtatactggggagcaatcttagtgcagagcagcagaaattgctgaacaaattagcagca
gtcctgaaggcccagaggtgcactgaatttaacagcagagtaactcatcttgttatccct
gatgttccaatgccaactactgtcaaatgcatgatggctcttctgactggatgttgggtc
ctcaagtttgaatgggtccaagcctgtctgcagagctcagctcgagaacaagaagagaag
tacgaagtccaaggtggcccccggcgagggcggctcaacagggagcagctgctgcctaaa
ttgtttgatgggtgttacttctattttttgggccctttcaaacagcaccagaagagtgat
ctgctggagctggtgaaggcagcaggtggccaggtcctggtgaggcaacccaaaccagac
agtgatgtgacacagaccatcaacacagtggcctaccacgcagagcccagctctgaccag
aggctctgcactcagtatgtcatctatgacgtggcttccaagttccagccagacaaaatc
cggcagggcaaggtgtggatggccccctccagctggctcatagactgtgtcatggcattt
cagctcctgcctgtgaagtga
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integrated database retrieval system
