Sturnus vulgaris (common starling): 106856972
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Entry
106856972 CDS
T08833
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106856972 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svg03041
]
106856972 (DDX5)
03009 Ribosome biogenesis [BR:
svg03009
]
106856972 (DDX5)
Enzymes [BR:
svg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106856972 (DDX5)
Spliceosome [BR:
svg03041
]
Complex A
U1 snRNP components
U1 related factors
106856972 (DDX5)
Complex B
106856972 (DDX5)
Ribosome biogenesis [BR:
svg03009
]
Eukaryotic type
Pre-60S particles
Helicases
106856972 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
106856972
NCBI-ProteinID:
XP_014738246
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MPGYSSDRDRGFGAPRFGGSRGGPLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPD
VVRRTAQEVEQYRASKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQG
WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQ
QVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGA
LELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRD
GWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YIHRIGRTARSTKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLIEDRGSGRSR
GDRRDRYSAGKRGGFSSFRERENFERTYGALGKRDFGAKTQNGAYSAQSFSNGTPFGNGF
AAAGMQAGFRAGGNPAGAYQNGYEQQYGSNIANMHNGMNQQQYAYPATGAAPMIGYPMPT
SYSQ
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggtattccagcgacagggatagagggtttggagcccctcgttttggaggaagt
agaggtggacctctctctgggaagaaattcggaaaccctggggagaaacttacaaaaaag
aaatggaacttggatgagctgcccaaatttgagaagaacttctaccaagaacatccggat
gtagttagacgtactgcgcaagaagttgaacagtacagagcgagcaaagaggtcacagtt
aggggccataactgtccaaaaccaattatcaacttttatgaagcaaacttccctgcaaat
gttatggaagtaattcagaggcagaacttcactgaaccaactgctattcaagcacaaggt
tggcctgttgcattgagtggattggatatggttggagtggcacagactggatcagggaaa
acactctcttacttactgcctgccattgtgcatataaatcatcagccattcctggagcga
ggagatggacctatttgtcttgtgttggcaccaacccgtgaactggcccaacaagtgcag
caggtagctgctgaatacagcagagcatgtcgtttgaagtccacgtgtatttatggaggt
gctccaaagggaccacaaatccgtgacctggaaagaggtgtggaaatctgcattgcaaca
cctggaagactcatagacttcttagaagctggaaagaccaatctcaggaggtgtacttac
ctcgtccttgatgaagctgacaggatgcttgacatgggatttgaacctcagatcagaaaa
attgtggatcagattagacctgacaggcagactctgatgtggagtgccacatggcctaag
gaagtgaggcagctggctgaagatttcttgaaagaatatgtgcacatcaacattggtgca
ctggaactcagtgcaaaccacaacattcttcaaattgtggatgtgtgtcatgatgtagag
aaagatgacaagcttattcgtttgatggaagaaatcatgagtgagaaggaaaacaaaaca
attgtctttgtggaaaccaaaaggcgttgtgatgatcttaccagaaaaatgaggagagat
gggtggccagcgatgggtattcacggtgataaaagtcagcaggagcgggactgggttcta
aatgaattcaaacatggaaaagcaccaatcctgattgctacagatgttgcatccagaggt
ctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaactcctcagaggac
tatatccaccgaattggacgaactgcccgcagtaccaaaacaggcacagcttacacattc
tttactcctaacaatattaagcaagtaaatgacctcatctctgtgcttcgggaggctaat
caagccatcaaccccaaattgcttcagctgattgaagacagaggttcaggtcgttcccga
ggtgaccgacgtgacagatactctgcgggcaaaaggggtggatttagtagttttagagag
agggagaactttgagagaacctatggtgcgctaggcaagagagacttcggagcaaaaacc
caaaacggggcttacagcgcccagagtttcagcaatggaactccctttgggaatggcttt
gcagctgcaggcatgcaggccggcttcagggccggcggtaaccctgcaggagcgtaccag
aacggctacgagcagcagtacggcagtaacattgccaacatgcacaatggcatgaaccag
cagcagtatgcctaccctgccactggtgctgctcctatgataggttaccccatgcccaca
agttattctcaataa
DBGET
integrated database retrieval system
