Sturnus vulgaris (common starling): 106856980
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Entry
106856980 CDS
T08833
Symbol
ABCA5
Name
(RefSeq) ATP-binding cassette sub-family A member 5 isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106856980 (ABCA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svg02000
]
106856980 (ABCA5)
Transporters [BR:
svg02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
106856980 (ABCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
AAA_16
AAA_22
MMR_HSR1
AAA_23
ATP-synt_ab
Dynamin_N
Rad17
Motif
Other DBs
NCBI-GeneID:
106856980
NCBI-ProteinID:
XP_014738258
LinkDB
All DBs
Position
Unknown
AA seq
1648 aa
AA seq
DB search
MAAAAAREAGVWRQTRALLFKNCLIKCRTKKSSVQEVLFPLFFLFWLILMSMMHPHRKYD
EVPNTDLDTLDTSVLVNFVIGYTPPTAMAREIMKKVAFDNFEDGLITEEYLSEEELEEAS
VLKPSNFVGVVFKDSMSYQLRFHDSIAMSSIYTESRATCSSLRKSCESVTYWSSGFTALQ
ACIDAAIIQLKTNHSVWEQLDLTRAIVMGEAAVVEIDNFPRAIILIYLVIAFSPFGYYLA
IHIVAEKERKLKEFLKILGLHDTAFWLSWVLLYVSLIFVMSILMAVIATASSLFPQSSAF
VIFLLFFLYGVSSVFFALMLTPLFKKSKHVGIVEFLATLVFGFVGLNIVLLEDFPKSFVW
ILSPLCQCSFLIGVAQVMHLEDYEDGATFANINAGPYPLCISLILLVLDSIFYLLVAVYL
DQVIPGEFGLRRTPFFFMKPSFWSKHRKNYKELYESSVNGSLSFSEIVEPVPAEFQGKEA
IRISCVQKTYRKKGETVEALRNLSFDIYEGQITALLGHSGTGKTTLMNILCGLCPPTDGF
VSVYGHRVSEIDEMLEVRQIAGVCPQADIHFDILTVEENLSIFAAIKGIPQNDLIQEVQK
VLLDLEMQPIRDNQAKKLSGGQKRRLSVGVAVLGNPKVLLLDEPTAGMDPCSRHIVWNLL
RSRKARGVTVFSTHFMDEADILADRKAVISQGMLKCLGSSLFLKSKWGIGYRLSMHMDSY
CDAEATTLLIRQHIPAASLLQHSHQQLVYSLPLRDMDKFPGLFSDLDTHSHLGVITYGVS
MTTLEDVYLKLEVEAEIDQADYSVFHSQQAQDEMDTKSLDDMEQSLLVLSEAKAPAMSNS
ALWKKQVSTIAKVHFLSLKRENKCVRVMLLLFLIFLVVQILLFFIHHIIKNAVAAIRLSP
DLYLLKPGENYHKYRSRLLLQNSTESDISDIVHSLGTMNILWEMFNDSDYVSVAPHSAAL
NVFALQSRQNYVFNIIFNSTMVHSLPVLMNIVSNLLLRSLNVTESIQIWSNPFIQDLPDT
IFRLEIYFEAVLLGIIITGMPPYFAMDNAENHKIKAYTQLKIAGLYPSAYWTGQAVVDLP
LFFLILTLMIGSLFAFHYGVYFYVGKFLAVIFCLIGYVPSVVLFTYVVSFTFRKVQNTKE
FWSFIFSVTALLCTVVTEVSFFLDHYLVTTILHYVFSIFIPIYPLIGCLICFIKVSWKGK
SESGGYHDPWDRLLVAVLAPYLQCVVWLFLLRCFELKNGGRTVREDPFFRKCFTKAKPWK
FPDVPHEENEDEDVKAERLRVKEILSSPRSEEMPAILVSSLHKEFDERKEFLLGRKIKKV
ATKHVSLCVKKGEILGLLGPNGAGKSTLINMLVGEIEPTSGQVLMGDDSLGLSSEDDSVK
FVGYCPQTNPLWPDITLQEHFEIYGAIKGMSQSDVKEVIKRIASVLDLKDHLQKTTKKLG
MGLKRKLCFALSMLGNPRVTLLDEPSTGMDPKAKQHMWRAIRAAFKSKERAAILTTHYME
EADAVCDRVAILVSGQLRCIGTVQHLKSKFGRGYFLEMKLREAADVQQVEYLQSQILHIF
PNASRQESFASILAYKIPKEDVQSLSHSFSKLEEVKHAFNIEDYSFSQATLEQVFVELAK
EQEEEDSSFGTLNSSLWWERTQEDRVIF
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagctgctgcaagagaagcaggagtgtggaggcaaacccgagctctcctcttc
aagaattgtctcattaagtgtaggactaagaaaagcagtgtccaggaggtacttttccca
ctgttttttctattctggctgatcctgatgagcatgatgcaccctcacaggaaatatgat
gaggttcccaacactgacctggacaccctggacacctcagtgctggtgaattttgtcatt
ggctacaccccccccacagccatggcccgggaaatcatgaagaaagtggcttttgataac
tttgaggatggcctcatcacagaggaatatttgagtgaggaggagctggaagaagccagt
gttctcaaaccctccaactttgtgggggtggtgttcaaggattccatgtcctaccagctg
aggttccacgattccattgccatgtcctccatttatacagaatccagagccacgtgctcc
agcctgaggaagagctgtgagtctgtgacctactggagctcggggttcacagcactgcag
gcctgcattgatgctgccatcatccagctgaaaacaaaccattctgtttgggagcagctg
gatctcaccagagccattgttatgggagaggctgcagtggtggaaattgataatttccct
cgtgcaatcattttaatttacctggtgattgcattctctccctttgggtattatttggca
attcacatcgtggcagaaaaggagaggaagctgaaggagttcttgaaaattttgggactc
catgacactgccttctggctgtcctgggtgctgctctacgtgagcctgatttttgtcatg
tccatcctcatggcagtgatcgccacggcctcgtcccttttcccccagagcagtgccttt
gtcatattcctcctttttttcctctatggagtctcctcagttttctttgccctgatgctg
actcctctgtttaagaagtccaagcacgtggggatagtggagttcctggcaactctggtt
tttggctttgtggggctcaacatcgtcctgctggaggatttccccaaatccttcgtgtgg
atcctcagtcctttgtgtcagtgcagcttcttaattggtgttgcacaggtcatgcatctg
gaggattatgaagatggggcaacatttgcaaacatcaatgctggtccttaccctctctgt
atctccctgattctcctggtgctggacagcatcttctacctgcttgtagctgtctacctt
gaccaggtgatcccaggggagtttgggctgcgccggacaccctttttcttcatgaaaccc
tcgttttggtcaaagcacaggaaaaactacaaggagctgtatgagagcagtgtcaacggc
agcctgagcttcagtgagatcgtggagcctgtgcctgcagaattccagggcaaggaagcc
atcaggatcagctgtgttcagaaaacatacaggaaaaagggggaaacggtggaggctctc
agaaatttgtcctttgacatctacgaggggcagatcacagcgctgctggggcacagcggc
accgggaagacgacgctgatgaacatcctctgcgggctgtgccctcccaccgatgggttt
gtctcagtctatgggcacagggtgtcagagatcgatgagatgctggaggtgcggcagatc
gcaggggtgtgtccccaggctgacatccacttcgacattctgactgtggaggagaacctc
tccatctttgctgccatcaagggcatccctcagaacgatctgatacaagaggtgcagaag
gtgttgctggatttggagatgcagcccatcagggacaatcaagccaaaaaattgagtggg
gggcagaagaggaggctgtcagtgggagttgctgttcttgggaaccccaaggttctgctg
ctggacgagcccacggcagggatggatccctgctcccgtcacatcgtgtggaacctgctg
aggagcaggaaagccagaggagtgacagtgttcagcacccacttcatggacgaggctgac
atcctggctgatcgtaaagctgtgatttcccaggggatgctcaagtgtctgggctcgtcc
ctgttcctcaagagcaagtggggcattggatatcgcctcagcatgcacatggactcgtac
tgcgatgccgaggccaccacgttgctgatccggcagcacatccctgcagccagcctgctg
cagcacagccaccagcagctggtctacagcctgcccctgagggacatggacaagttccca
ggtttgttctctgacctggacacccattcccacctgggggtcatcacctatggggtgtcc
atgaccacgctggaggacgtgtacctgaagctggaagtggaggcagagattgatcaagca
gattacagcgtgttccactcccagcaagctcaggatgagatggacaccaaatccctggat
gacatggagcagagcctgctggtgctgtctgaggccaaggcaccagccatgagcaactca
gccctgtggaagaagcaggtttccaccatagccaaagtgcatttcctcagtctgaaacgg
gagaacaaatgtgtcagagttatgttgctgcttttcctcattttccttgtagttcagatt
ttgttgtttttcatacaccacatcatcaaaaatgctgtagctgctatcagactctcccca
gatttgtatttgctgaagcctggagagaattaccacaagtacaggagtcggctcctgctg
cagaactccacagagtcggatatcagtgacattgtgcactccctgggcaccatgaacatc
ctgtgggagatgttcaatgacagtgattatgtgtcagtggcacctcacagtgcagctctg
aacgtgtttgccctccagtccaggcagaattatgttttcaacatcatattcaacagcacc
atggtgcattccctgccagttttgatgaatattgtcagcaacctcctcctgcgcagtctg
aacgtgactgagagcatccagatctggagcaaccccttcattcaggatcttccagacacc
attttcaggctggagatctattttgaagccgtgttactgggaatcatcatcactgggatg
cctccctactttgccatggacaacgcagaaaaccacaagatcaaggcttacacccagctg
aagattgcagggctctacccctcagcttactggactggccaggctgtggtggatcttcct
ctgttcttcctcatcctcaccctgatgattggcagcctcttcgccttccactacggcgtt
tatttctacgtgggcaagttcctggctgtgattttctgcctgattggttacgtcccctca
gtcgtgctcttcacctacgtggtttccttcaccttcagaaaagtccagaacacgaaggag
ttttggtcatttatattttcagtgacagccttgctctgcacagttgtcactgaagtgtcc
tttttcctggaccattacctggtaaccacaatcctgcattatgtcttctccatcttcatt
cctatttatccccttattggctgcctgatctgttttataaaggtctcctggaaaggcaag
agtgagagtgggggataccacgacccctgggaccggctgctggtggcagttctggctccc
tacctgcagtgtgtggtgtggctgttcctgctgcgctgcttcgagctgaagaacggaggg
aggacggtgagagaagatcccttcttcaggaaatgttttaccaaagccaagccctggaaa
ttcccagatgtgcctcacgaggagaacgaggatgaggatgtgaaggcggagaggctgcgt
gtcaaagagatcctgagcagccccaggagtgaggagatgccagcaatcctggtcagcagc
ctgcacaaggagtttgatgaaaggaaggagtttcttctggggagaaaaataaagaaagtg
gcgaccaaacatgtttccctctgtgtgaagaaaggagaaatcctgggtttgttgggaccc
aatggagctgggaaaagcacattaattaacatgcttgttggggagattgagccaaccagt
gggcaggttctgatgggagatgattccttggggctgagcagtgaggatgactctgtgaaa
ttcgtggggtactgtcctcaaacaaatcctctctggccagatatcacattgcaggaacac
tttgagatttatggtgctatcaaaggcatgagccagtctgatgttaaagaagtcatcaag
cgcatcgccagcgtgctggatctaaaggaccacctgcagaagacaaccaagaagttggga
atggggctgaaacgcaagctctgctttgccctcagcatgctgggcaaccctcgggtcacg
ctgctggacgagccctccacaggcatggatcccaaagccaagcagcacatgtggcgggca
atccgagctgcctttaagagcaaggagagagcagcaatcctcaccacgcactacatggag
gaggcagatgctgtctgtgaccgtgtggccatcctggtgtcagggcagctcaggtgtata
ggtactgtccaacacctgaagagcaagtttggcagaggatacttcttggaaatgaaatta
agggaagcagcagatgtgcagcaggtggagtatctgcagagccagattttgcacatcttc
cccaacgccagccgccaggaaagttttgcttctatcttggcatataaaattcctaaagaa
gatgtacagtcactttcacattctttttccaagctggaagaagtaaaacatgccttcaac
atcgaggactacagcttttctcaagcaacactggaacaggtgtttgtggagctggcaaag
gagcaggaggaggaggacagcagctttggcaccctgaacagcagcctgtggtgggagagg
acacaggaggaccgagtcattttctga
DBGET
integrated database retrieval system
