Sturnus vulgaris (common starling): 106857074
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Entry
106857074 CDS
T08833
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
svg
Sturnus vulgaris (common starling)
Brite
KEGG Orthology (KO) [BR:
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09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
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]
106857074 (CHD9)
Chromosome and associated proteins [BR:
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]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
106857074 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
106857074
NCBI-ProteinID:
XP_014738389
LinkDB
All DBs
Position
Unknown
AA seq
2892 aa
AA seq
DB search
MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQDAQ
NQQKMSEFDQLNQYDSLKLHSVNQSFNSSADNVLSPHSQFNCSPVHPQNQSNGMFPDVAD
GSPMWGHQTATTVSNQNGSPFHQGHSQSMQQNKSFVAHHDFALFQANEPQHQCASLRPQQ
SRNNTGQDALSQPKDFMEVNVSTSLRVSVNHPPSVSNPSTSQQPLSVQQFSQTASASIHF
CGNQEGNFDGQSPTITPCSVSNSQQFSSPYSYSNNHISPTSLLQPTTALSTSQQTHSISD
FTGSDAFTSQTGTKQETTEHMLNPNTPLNSSTFQMLHSAHPQGNFSSSKLSPVNINFPAS
TGSASQISHFTDPIESNGFTSLDDNLLHQVETHSEPFTGLDPDDLLQEDLLPQFDDSAFV
QDSTSHVLEHDLEHHITPQQVTPPSELVRAPSQSQIHPWHSSVSNQHLQGRSRAALQGQP
PSKKTDSSGSYTKLQNTQVKAMSEKKQKKKTDSESKQEKANRIISEAIAKAKERGERNIP
RVMSPENFPSVSAEGKEEKKGRKVKSKPKDKESKKPKTGSSSKMKEKTKIGKLIITLGKK
QKRKNESSDELSDAKQTPQQPLKDEDSQKRRSNRQVKRKKYAEEGEGKQSEEEAAKVSVK
IKKNSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRVIKKEISAGMTVDTEEFFVKYKNY
SYLHCEWATEQQLLKDKRIQQKIKRFKVRKAQRAHFFADMEEEPFNPDYVEVDRVLEVSL
CEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPPN
SWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEIL
LTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIV
RGTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVL
LTGTPLQNTVEELFSLLHFLEPSRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLK
EDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKC
CNHPYLIKGAEEKILGEFKETYSPSAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLI
FSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL
GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLK
LGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQIL
QRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNSL
VIDTPRIRKQTRPFSATKDELADLSEVESEGDEKPKLRRPCDRSNGYGRTECFRVEKNLL
VYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDG
QTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKHH
CNKVLLRVRMLYYLKQEVIGNEFQKVFDGTDASEIDVWVPEPDHSEVPAEWWDAEADKSL
LIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVEDPEYKPAPAL
FKDDIEDDVSSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQQ
VQPTFPVQTSMMQLPYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPERGR
FDWTKFRAMARLHKKTDESLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQPITEERASR
TLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRTD
YHILRDPELSFMSAQRNYNQNKVALSRTSTPLLHQYQMALSASPLTPQSRLSDAKVNAFE
DTKAKNENLKEDPQSSEEESMSTEETQTILKSEPLSPKNGTPIQMTDHRPSVKAETDRRM
VAARTEPLTPNPASKKQRVSKRGSDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSHSRSG
SSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSDEEEAQKRAEGTPHIKAYDEESVA
SLSTTQDETQDSFQMNNGTPNSGYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWP
SARRNYDSTTVASFYTTKLLDSSGAAAEYSEPSAPTPPLAAVKEEYDQSPQLSKVKKHVR
EKEFTVKINDEGGLKLTFQKQGLSQKRPFESEEGALGQQQYLARLRELQNASETSLVNFP
KSLPKSGTSSHLTASANGVIVDSQPVVKKRRGRRKNVEGVDVLFMNRNKQPNHVNPGINS
CQVAAGINSALTYTQSQGMLDAESPVPVINLKDGTRLAGDDAPKRKDLERWLKEHPGYVE
DSGACIPRMQLHDGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPLK
DLCRFLKENPEYGVAPEWGEVVKQSGFLPEGMFERILTGPVVREEVSRRGRRPKSEMAKA
TAAAAAASAASVPVNPLLANGLLPGVDLPSLQALQHNLQNLQSLQVTAGLMGMPAGLAAA
GEAKNVAAMFPMLLSGMAGLPNLLGMGGLLTKSAESVSEEKKGNDSKETDAKKERTEDQN
TDTGGENSVSSSPSTSSAAAAANPLSLNPLLLSNILYPGMLLTPGLNLHIPALSQSNIFD
VQNSESNDTGSAKPTEEKEENSRVRDQEDKGGTEPSSHNENSTDEGSEKADASSGSDSTS
SSSEDSDSSDED
NT seq
8679 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcctatgatggatttttttgatgatgccaatctttttagtgagaccttagaa
ggtttgtcagatgatgcctttgttcaacctggacctgtttcacttgttgatgaattgaat
ttgggtgcagaatttgaacctttgcacatagactcactgaaccatgtgcaagatgctcaa
aatcaacaaaagatgagtgagtttgatcagctgaatcagtatgattcactgaagcttcac
tcagtaaatcagtcttttaatagctctgctgacaatgtcttatcaccacactctcaattc
aattgttcaccagttcacccacaaaaccagtccaatgggatgtttccagatgtggctgat
ggtagtcctatgtggggtcatcaaactgccacaactgtttcgaatcaaaatgggtcccca
tttcaccaaggacattctcagtctatgcagcaaaacaaaagctttgtagcacaccatgac
tttgccttatttcaggctaatgaaccacagcatcagtgtgcctcgctccggccgcagcag
agcagaaacaacacggggcaggatgctctgagtcagccaaaagacttcatggaagttaac
gtgtctacttccctcagagtcagtgttaaccacccaccttcagtttctaatccatcgact
tcacagcagcctctgtctgttcaacagttttctcaaactgcaagtgcttcaatacatttt
tgtgggaatcaagaaggaaattttgatggacagtccccaactattactccatgttctgtc
agtaatagtcaacaattttcatctccgtattcctactctaataatcacatttctcctacc
agccttcttcagcctacaacagctctttctactagccagcagacacactctatctctgac
ttcactggaagcgatgcctttacatctcaaacagggaccaagcaagaaacaactgagcac
atgttgaatcctaatacacctttgaattcaagtacttttcaaatgttgcattctgcgcat
cctcagggcaactttagtagttcaaaactctctcctgtgaatattaattttccagcttct
actggttctgcttctcagataagccatttcaccgaccctattgaaagcaacggttttaca
tctttagatgacaacttacttcatcaggtggagactcacagtgaaccattcacaggactt
gacccagatgacctcctgcaggaagaccttctgccacagtttgatgattctgcgtttgtt
caggatagcacaagccatgttctagagcatgacctagaacaccacataaccccacagcaa
gtgacaccgccatccgaactcgtccgggccccgtctcaaagtcagatccatccttggcat
tcttcagtttccaatcagcacctgcaaggcagaagtcgtgcagccttacaaggacagcct
ccttccaagaagactgatagttcaggatcatatactaagttgcagaatacccaggtgaag
gcaatgtctgaaaagaagcagaagaaaaaaacagactcggaaagtaaacaagagaaggca
aatcgcataatatctgaagcaattgcaaaggcaaaagagagaggagagagaaacattcca
cgagtaatgagccctgaaaacttccccagtgtttcagctgaaggaaaagaggaaaagaag
ggtagaaaagttaaatccaaaccaaaggataaggagagcaaaaagccgaaaacgggttcc
tcgtccaaaatgaaagagaaaacaaaaattggaaagctgatcatcacactgggcaaaaag
cagaaaaggaaaaatgagtcttcagatgaattgtctgatgctaagcagactccacagcag
ccactgaaagatgaagactcacagaagagaagatcaaatcgtcaggttaaaaggaaaaaa
tatgctgaagaaggggaagggaaacaatcagaagaagaagcagctaaagtttctgttaaa
atcaagaagaattctgcacctttacctgctgaacagcctttacaattatttgtggaaaat
ccaagtgaagaagatgcagcaattgtagacaaaatcttatcctccagggtaataaagaaa
gaaatatctgctggcatgacagtagacacagaagagttttttgtcaaatacaagaactac
tcatatctccactgtgagtgggccacagaacaacagcttttaaaggataaaagaatccaa
cagaaaataaagcgattcaaagtaaggaaagcacaaagagctcacttttttgcggatatg
gaagaggaaccttttaatcctgactatgttgaagtagaccgggtattggaagtgtctctt
tgtgaagataaagacactggtgagcctgttatttactatttagtaaaatggtgttcattg
ccatatgaagacagtacgtgggagctgaaagaagatgtagatcaagcaaaaatagaagaa
tttgaacaattgcaagcttccaggcctgactcaaggagattggaccgaccacctccaaac
tcctggaagaagatagaacagtccagggaatataaaaatggcaatcagctcagggaatat
caactggaaggacttaactggctcctattcaactggtacaataggcgaaattgcatttta
gcagatgaaatgggccttggcaaaaccattcagtccattacattcctgtatgaaatcctc
ctgaccggtataagaggccctttcctgatcatagctcctctttccactataacaaactgg
gagagggaattccgcacgtggactgacctgaatgttgtggtgtaccacggcagtatgatc
agcaggcagatgatccagcagtatgagatgtacttcagggactcccagggccgcattgtt
cgaggtacctacaggttccaggccataatcacaacctttgaaatgattcttggtgggtgc
ccagaattaaatgcaattgagtggcggtgtgttattattgatgaagctcacagactgaag
aacaaaaactgcaaacttttggaaggactaaaattaatgaaccttgagcataaagtgctg
ttaacaggtaccccactgcagaacacagtagaagaattatttagccttcttcattttctg
gaaccatcgcgttttcctgctgaatctacattcatgcaagagtttggagaccttaaaaca
gaggaacaggttcagaaactacaagctatcctgaaacccatgatgctcaggagattgaaa
gaagatgtagaaaaaaagctggctcctaaggaggaaaccattattgaagtagaactaact
aatattcagaagaaatattaccgagcgattttggagaaaaattttgctttcttgtccaaa
ggagcagggcaggcaaatgtacccaatctggttaacactatgatggaactcaggaagtgt
tgtaaccacccttatctcatcaaaggtgctgaagagaagatccttggagagtttaaagaa
acatatagtccaagtgctcctgacttccacctgcaagcaatgatccagtctgctggtaaa
ttggttcttatagataagcttcttccgaaaatgaaagcgggaggccacaaggtccttatc
ttttctcaaatggtgcgctgccttgatattttggaggattaccttatacataaaaggtac
ctgtacgagcggatcgacgggcgcgtgcggggcaacctccggcaagccgccatcgaccgc
ttcagcaaacccgactcggatcgcttcgtcttcctcctctgcacccgcgctgggggcctg
ggcatcaacctcactgcagcagacacctgcatcatttttgattctgactggaatccccaa
aatgacctgcaggctcaagcccgatgccacaggattggtcagaataaagcagtgaaggtc
tacagactgatcacacggaattcctatgagagagagatgtttgacagagcaagtctgaaa
ctgggactggataaggctgtcttgcagagtatgagtggaagagaaaacagtgttggtggt
atccagcaactctcaaaaaaggaaatagaagacttgcttcgaagaggtgcctatggtgcc
attatggatgaagaggatgaaggctccaagttctgtgaggaagacattgaccagattttg
cagcgtcggactaaaaccatcaccattgaatccgagggaaggggctccacgtttgccaag
gctagttttgttgcatctggaaacaggactgatatttcactagatgatcccaacttctgg
cagaaatgggccaaaaaagcagaaatagatatcgatgctatcagtggtagaaacagcctt
gtaatcgatacaccaagaatcaggaaacaaacacggcccttcagtgctacaaaggatgag
ctggcagatttgtcagaggtggagagcgagggggatgaaaaaccaaagctgcggcggccg
tgtgaccgctccaatggctatggaaggacagagtgcttccgtgtggagaagaacctgctg
gtctatgggtggggtcgatggagagaaattctgtcccatggtcgcttcaagaggcagctg
aatgaacatgatgtggagataatctgccgagccttattagcctattgtctcgttcactac
agaggagatgagaaaataaagagttttatatgggatctcatcaccccaacagaggatggg
caaacacgagagttacagaaccaccttggcttatcagcccctgtgcctagaggaagaaaa
ggaaaaaaagtgaagacccaggctagcacttttgatatacacaaagcagaatggcttcga
aaatacaatccagaacatctattgcaagatgaaggatacaaaaagcacataaaacaccat
tgcaacaaggtcttacttcgagtaagaatgctgtattacttaaaacaagaagtcattggt
aatgaattccaaaaggtctttgatggaactgatgccagtgaaattgatgtttgggttcct
gagccagaccactctgaagttcctgctgagtggtgggatgcagaagcagataaatctctt
ctaattggagtttttaaacatggttatgaaaaatacaatactatcagagcagacccagct
ctttgcttcttggaaagggttggaaaaccagatgagaaagcagttgctgctgaacagaga
gcaaatgattatatggatggggatgtagaagatccagaatataaaccagcaccagcactg
tttaaagatgacatagaggatgatgtttcatccccaggtgatcttgtaatagcagatgga
gatggacaaatgatggaaggggacaaaatctattggcccactcagtctgccttaacaacg
cgtctgcgccgcctgataacagcttatcaacgaaccagtaaaaacaggcaggcccagcag
gtccagccaacattcccagtacaaaccagtatgatgcagcttccatatgaagaagctgca
ctaaatccaaagatggctgctaagattgaaagacagcaaagatggacaagaagagaagaa
gctgacttttacagagttgtgtccacatttggagtggtgtttgaccctgaaaggggacgg
tttgactggaccaagtttcgagcaatggctcggctgcacaagaaaacagatgagagcttg
gagaagtacctgtatgcatttatgtcaatgtgcaggagagtctgtcgtctcccctcaaaa
gaagagctcgtggacccgaacatttttatccagcccatcacagaggagcgcgcttcccgg
accttgtaccgcatcgagctcctgcggaaagtgcgagaacaggctctcagacacccgcag
ctgtttgagcggctaaagctgtgccagccaaacccagacctacctgtctggtgggaatgt
gggactcacgacagggatttacttattggagctgctaagcacggagttagcaggacagat
tatcatattcttcgtgatcctgaactctcctttatgtctgcccagaggaactataatcaa
aacaaagtggctctctcaaggacttctactccactcttgcaccagtaccagatggcatta
tctgcttctcctcttacacctcagtcaagactgtcagatgctaaagtgaatgcttttgag
gacacaaaagctaaaaatgaaaatctgaaagaggaccctcagtcttctgaagaggaatct
atgtctacggaggagacacaaacaatactgaaatctgaacctttgagccccaaaaatggc
accccaatacaaatgacagaccacagacctagcgtgaaggctgagacagacaggcgcatg
gtggcagcaaggacagagcctctaactccaaacccagcttccaaaaaacagagagtcagc
aaaagggggtctgactctagctctgactcagactctgactcagatagatcatcctgttct
tccaggtcatcatcttcatcctcttcgtcttcctcatcttgttcccactcccgatctggc
tctagctcttcatcatcttcatcctgttcttcagcatcttcatcctcttcctcatcgtcc
tcatcatcatcgtcgtcgtcatcatcatcgtctgaagagagtgatagtgatgaagaggag
gcacagaaacgtgcagaaggaactccacatataaaagcctatgatgaagagagtgtggcc
tctctgagcaccacacaagatgagacacaagacagtttccagatgaacaatgggacacca
aattctggttatctcctacaaggtggatacatgttggctgcatcctactggccaaaggat
cgagttatgattaaccgactggacagcatttgtcagacagtgttgaagggtaaatggcct
tcagcccgaaggaactacgacagcaccacagtggcatcgttctacaccaccaaactcctg
gacagctcaggggcagctgcagagtacagtgagcccagtgcacccacacccccccttgca
gctgtaaaagaagaatatgaccaatcaccccagctgtcaaaggtgaagaagcatgtacga
gaaaaggagtttacagtgaaaatcaatgacgaaggtggtttgaaattgacttttcagaag
cagggactgtctcagaaaaggccatttgaaagcgaggagggtgcattgggtcagcagcaa
tatctggctcggctacgtgaactccagaatgcgtcagaaaccagccttgtcaacttccca
aaatcacttcccaaatcaggtacttccagtcatttaacagccagtgccaatggagtcata
gttgacagtcagcctgtagtcaaaaagagacgaggaagaaggaagaatgtggagggagtt
gatgtcctttttatgaatagaaataaacagcctaaccatgttaatccaggtattaactcc
tgccaagttgctgcaggaataaactcagcactcacttacacacagtcccaaggcatgctc
gatgcagagagtccagttcctgttattaacctaaaagatggaacaaggcttgcaggtgat
gatgcccctaaaagaaaagatttagaaaggtggcttaaagaacatcctggatatgttgaa
gattcgggagcttgtatccctaggatgcagctgcacgatgggaggcctaaacaaaaaaga
caccgttgtcgaaaccccaataaactggatgttaacagtttaactggtgaagaacgtgtt
cagctcattaatagaagaaatgcaagaaaggttggaggtgcatttgctccccctctgaag
gatttgtgcaggttcttgaaagaaaatccagagtatggagtggctcctgagtggggagaa
gttgtaaaacagtctggcttcctccccgagggaatgtttgagcgcatcctgacgggcccg
gtggtgcgggaggaggtgagccggcgggggaggcgccccaagagcgagatggccaaggcc
acggcggctgcggcggccgcctccgctgccagcgtccccgtcaaccccctgctggccaac
gggctgctgccgggggtggacctgcccagcctgcaggccttgcagcacaacctgcagaac
ctgcagtcgctgcaggtgacggccggattgatgggaatgccggctggcctcgccgccgct
ggagaggccaagaacgtggctgccatgttccccatgctgctgtcagggatggctggatta
ccaaacctgctgggcatggggggactcctgacaaagtccgcagaatccgtgtcggaggag
aaaaagggaaacgattccaaggagacagatgcaaagaaagaaaggacagaagaccaaaat
acggatactggtggtgaaaactctgtttcaagttctccttcaacatcctctgccgccgca
gctgccaatcctctctctcttaaccctttacttttgtccaacatactttacccagggatg
cttctcactccaggccttaatcttcatatcccagctttgtctcagtctaatattttcgat
gtacagaacagtgaaagcaatgacacaggctcagccaagcccacagaagaaaaggaggaa
aattctagggttagagatcaggaagacaaagggggaacggagccaagctctcacaacgaa
aacagcacagatgagggttcagagaaagcagatgcttcatctggatctgacagtacatca
tcttcatctgaggattcggattcgagcgatgaagactga
DBGET
integrated database retrieval system
