Sturnus vulgaris (common starling): 106857261
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Entry
106857261 CDS
T08833
Symbol
ABCA4
Name
(RefSeq) retinal-specific ATP-binding cassette transporter
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106857261 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svg02000
]
106857261 (ABCA4)
Transporters [BR:
svg02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
106857261 (ABCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
DUF4162
Motif
Other DBs
NCBI-GeneID:
106857261
NCBI-ProteinID:
XP_014738716
LinkDB
All DBs
Position
Unknown
AA seq
2292 aa
AA seq
DB search
MNFFRQVRLLLWKNWILRRRQKLRFLVELVWPLTLFLALVWLRKANPLYRQHECHFPNKA
MPSAGTLPWLHGIFCNMNNPCFRSPTHGESPGVVSNYKNSILARVYKDAQELLLEAPEVR
DLGRIWEELIIMTQFMETMRTNPERIAGRGIRILDILKDGETLTSFLLENVGLTDFVVYQ
LINAQVRPEQFAYGVPNLTLKDIACSEMLLDRFIIFSSRRGLPSVHKAMCALSQDSLQRV
EDALYANVDFFKLFQLLPTVLDRNSPGADLKAWGRVLSNVSQAVQKLARKPSVQDLLRVL
QPFVQDGRSESLGHLVSSLSDLFCGYPEGGGSRVLSFNWYEDNNYKAFLGIDSTRKKSGY
LYDNTTTPFCNALIQNLESNPLTKIAWSAVKPLLMGKILFAPDSPSVRKIIKNANSTFEE
LERLQLLTKAWEEVGPQLWYFFQNSLQMNMIRDSLKHPTVRDFLNSQLGAEGFTAEHIIN
FLHNGSSRSREKGMVDFDWRNIFNAVDQVLRLLSQYLECLTLDKFEGYLDETQLTPQALY
LLEENKLWAAVVFPDLEPTTNNLPPHVTYKIRMDIDSVEKTNKIKDRYWDPGPRADPVDD
LRYIWGGFAYLQDMIEHGIIKTQTGTEVPLGIYLQQMPYPCFVDDVFMITLNRAFPIFMV
LAWIYSVSMTVKSIVLEKEMRLKEAMKNRGITNGVFWCTWFLDSFSMMAVSTFLLTALIM
HGQVLHYSNPLLFFLFLLTFITATIMQCFLFSTFFSKANLAAACSGVIYFTLYLPHIVCF
VWQDRLTVNLKILASLLSQVAFGFGTEYLSRYEEQGLGLQWGNIRTSPLEGDEYSFLFSI
NMMLFDAFLYGILAWYLDNIFPGDYGLPQPWYFPLLESYWLGSRSPEAEKTASADEKLDK
NVRSCKLVSESEAKLPEKTEEKSDSQGKKDVNTFFEPEPTGLIPGVCIQNLVKIFANRPK
PAVDGINITFYEGQITAFLGHNGAGKTTTMSILTGLFPPTSGTVLVGGLDIQTHMDSIRH
RLGMCPQHNILFHHLTVAEHILFYSQLKGRSREEAEQELETMLEDMGLTHKRNEEAQNLS
GGMQRKLSVAIAFVGEAKVVVLDEPTSGVDPYSRRSIWDLLLKYRPGRTIILSTHHMDEA
DILGDRVAIISQGKLFCSGSPVFLKNCFGSGFYLTLVRKMRTTKMGRATSFCSCGSQCSC
SCSSCVHRGEEGAPELELDGDLNELAEVIHHHIPEAKLIESIGQELIYLLPNKNFKQRSY
ASLFRELEETLDDLGLSSFGVSDTPLEEVFLKVTAEADPEMQNTGDAQENGSALGKTTEN
KPAEQTALKTNDTSRMPVGRAGDQNEGKGSRQYKGFQLVHQQIKALLIKRFHHASRSHKD
FLAQVVLPASFVLLSLVLTVIIPPFGEYPALTLHPWIYGQQFTFFSNERPGNEQMVSLTH
AFLNKPGFGIRCMKNQPLLNYPCNNMPTAWNTPAVHPNLSNLLLSQQWSPENPSPSCKCS
THKKLTMLPECPAGAGGLPPPQRVQRSTEILQDLTHRNISDFLVKTYPTLIKGSLKSKYW
VNEQRYGGISIGGRLPVLHVSGDQIVNFLSDLGRMMNVTGGQTSWAAAKEISNFLKYMET
EDNIKVWFNNKGWHAMVSFLNVANNAILRANLRTGQDPEEHGITAINHPLNLTKEQLSEV
TVLTTSVDAVVAICVIFAMSFIPASFVLYLIQERVTKAKHLQFVSGVSPVTYWLTNFMWD
IVNYALSAGMVVAIFAGFNKKAYASPTNLPVLVSLLLLYGWAVIPMMYPASSFFSIPSTA
YVALSCINLFVGINSSAITFILELFENNPSLLKFNKTLKNVLLVLPHFCLGRGLIDLAMN
QAVTEVYARFGEEHVSNPFQWDFVGKNLAAMALQGVVFFFLNLFMQHRFFSTRWFADTAM
SPIINEDEDVAEERKRIMNGGNKTDILQLQELTKIYAGRHKPAVDRLCVGIRPGECFGLL
GVNGAGKTTTFKMLTGDTDVTSGDAVVAGNSILTHISNVHQNMGYCPQFDAIDDLLTGRE
HLYLYARLRGVPAEEIKRVAEWGIQKLGLPMYADHLAGTYSGGNKRKLSTAIALIGCPPL
VLLDEPTTGMDPQSRRLLWDSIVGVLREGRAVVLTSHSMEECEALCTRLAIMVQGTFKCL
GTIQELKYKFGDGYIVTLKIKAPKSGLPPDPAPAEKFIHINFPGSLQREKHYNMLQYQIC
SSSLAKIFRLIISNKENLHIEEYSVSQTTLDQVFVNFAKEQMEDEEIALHPRAAGASREA
KVSPALHQQAVA
NT seq
6879 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcttcaggcaagtcagacttctactctggaagaactggatccttcggagaaga
caaaagcttcgttttctagtggaacttgtatggcctctgacattgtttcttgcacttgtc
tggctgaggaaagctaatccactgtatcgccagcatgaatgtcactttccaaacaaggca
atgccatcagcaggaacactgccatggttacatggcatcttctgtaacatgaacaatccc
tgtttccgcagcccaacccatggagagagtccaggtgtggtgtccaactacaaaaattcc
atccttgcaagggtatataaagatgctcaggagcttttactggaagcccctgaagtccgt
gaccttggaagaatctgggaagaactgatcattatgactcaatttatggaaacaatgaga
actaatcctgaaagaattgcaggaagaggaatacgaattctagacattttgaaagatggg
gagaccctcacttccttcttgctagaaaatgttggcctcacagattttgttgtttaccaa
cttattaatgctcaagtgcgccctgaacagtttgcctatggtgtccctaacttgactctg
aaggacattgcttgcagtgagatgctcctggaccgctttataatcttcagcagccgaaga
ggtctcccctctgtacacaaggccatgtgtgccctgtcccaggacagtcttcaaagagta
gaagatgccttgtatgcaaatgttgatttctttaagctatttcagctgcttcccactgtg
ttggacagaaactcaccaggtgctgacctgaaggcatgggggagggtgctgtctaatgtc
tcccaagcagtgcaaaagctggccaggaagccaagtgttcaggaccttttgagggttctg
cagccatttgtacaagatggaaggtcagaatccttaggccacttggtgagttccctgtcg
gatcttttctgtggctacccagaaggaggtggatccagagtgctttccttcaactggtat
gaagataacaattacaaagctttcctggggattgactcaacaaggaagaagtctggttat
ctttatgataatacaaccacacccttttgtaatgcattgatccagaacttggaatcaaac
cctttaaccaaaatagcctggagtgctgtgaagcccctgctgatgggaaaaattctcttt
gctcctgattcaccttctgtacggaaaatcataaaaaacgcaaactccacttttgaggaa
cttgaacgtctccagctgttgaccaaagcttgggaggaagtaggacctcagctgtggtac
ttctttcaaaacagcctgcaaatgaatatgatccgtgactctctgaagcaccctacagtg
agggacttcctgaacagccagctgggtgcagaaggcttcactgcagaacacataatcaac
tttctccacaatggatcttcaaggagccgggagaagggaatggtggactttgactggagg
aacatcttcaatgctgtagaccaagttctgcgtttgctcagtcagtatttggagtgtttg
accttggataaatttgaaggttatcttgatgaaactcagctgactcctcaagccctttac
ctgctggaggaaaataaattatgggctgctgtggtttttccagacttagaacctacaacc
aacaatctccccccacacgtgacatacaagatccgaatggatatagactcagtggagaaa
acaaacaaaatcaaagacaggtactgggatcctggtccaagagctgatcctgtggatgat
ttacgatatatctggggaggctttgcatatctccaggacatgattgagcatgggattata
aagacacaaacaggcactgaagtgccattgggaatttatctgcagcaaatgccatatcca
tgttttgtggatgatgtcttcatgatcaccttaaaccgcgcctttcccatcttcatggtg
ctagcttggatatattcagtgtccatgactgtgaagagtatagtgctggagaaggaaatg
cgcctgaaagaggccatgaagaacaggggcataaccaacggagtgttttggtgcacttgg
ttcctagacagcttttccatgatggctgtgagcacattcctcctcacagctttgattatg
catggacaagtgctacattatagcaatccacttctgttctttctattcctactgacattc
atcacagccaccataatgcagtgtttcttgttcagcaccttcttctccaaagcaaatctg
gcagctgcctgcagtggagtcatctacttcaccttgtacctgcctcacattgtctgcttt
gtctggcaagaccgtctgactgttaatctgaagatcctagcaagtttgctttctcaagta
gcttttgggtttggtacggaatacttgtcacgctatgaagaacaaggtcttggcctacag
tggggtaacatcagaaccagtcccttggaaggagatgaatatagttttcttttttccatt
aacatgatgctttttgatgcttttctctatggaatacttgcttggtatcttgataacatt
tttccaggggactatgggttaccacagccttggtatttccctctgctggaatcttattgg
cttggctccagaagcccagaagctgagaaaacagcaagtgctgatgaaaaactggataaa
aatgtcagatcatgtaaattagtgtctgaaagtgaagctaaactgcctgaaaaaacagaa
gaaaagagtgacagccaggggaagaaggatgtaaataccttctttgagcccgagccaaca
ggattgattccaggagtatgcattcagaacctggtgaagatttttgcaaacagacccaaa
ccagcagtagatgggataaatatcactttttatgagggtcagatcacagccttccttggt
cacaatggagcaggaaagacaactaccatgtcgatactgacaggcctgttcccacccaca
tctggaactgtgctggttggtggcctggacatccagactcacatggactccattcggcac
agattagggatgtgccctcagcacaacatcttattccatcaccttactgtagcagagcac
atcttattttattctcaactgaaaggaagatccagggaagaagctgagcaagagctggaa
acaatgctggaagacatgggcctcacccataaaagaaatgaagaagctcagaatttgtca
ggtggaatgcagaggaaactgtctgttgccattgcttttgtgggtgaggcaaaagtggta
gtcttggatgagcccacttctggagttgatccatattccaggcgatctatctgggatctt
ctgctgaaatatcgcccaggcagaactattatcctgtcaacccatcatatggatgaggca
gacatccttggagatagagtagccatcatatcccaagggaagctcttctgctcaggctct
cctgtattcctaaagaactgttttggctctggcttttatctcacccttgttcgcaaaatg
agaaccacaaaaatgggaagggctacatcattttgtagctgtggatcccagtgctcctgc
tcctgctccagctgtgtgcacaggggtgaagaaggagctccagagctggaactggatgga
gatctaaatgagctagcagaagtaatccaccatcatatcccagaagcaaaattaattgaa
agcattggtcaggaactgatttatcttttgcccaataaaaactttaaacaacgatcttat
gccagtctcttcagagaactggaggaaacattggatgacctgggactcagcagttttgga
gtttcagacacaccacttgaagaggttttcctaaaggtcacagcagaagctgaccctgaa
atgcaaaatacaggagatgctcaagaaaatggttctgctcttggcaaaactactgagaac
aagccagctgaacaaaccgccctgaaaactaatgacacttctcgaatgccagtaggcaga
gcaggagatcaaaatgaaggcaaagggtcccgacagtataaaggctttcagcttgtacat
cagcagatcaaagcactgctcatcaaacgcttccaccacgcctcccgcagccacaaggac
ttcctagcacaggtcgttctccctgctagttttgtgttgctgtctctagtacttacagta
attattcctccatttggagaatatcctgctttaacattacacccttggatctatggacaa
cagtttacttttttcagcaatgaacgtcctggcaatgagcagatggtttcccttactcat
gctttcttgaataaaccaggatttggaattcgctgcatgaagaatcagcctcttttgaac
tacccatgcaataacatgccaactgcctggaacacacctgctgttcatcctaacctaagc
aacctcctgctgagccaacagtggagccctgagaatccatcaccttcctgcaagtgcagc
actcacaagaaactcactatgctgccagaatgccctgcaggtgcaggaggcctcccacca
ccacagagagtgcaacgcagcacagaaatccttcaagatctgacccacagaaatatttca
gattttctggtgaaaacatatcccactttgataaagggaagcttgaagagtaaatactgg
gtcaatgagcagaggtatggaggaatttctataggaggaaggcttccagtccttcatgtt
tctggagatcaaattgtcaattttttaagtgatcttggccgaatgatgaatgtgacagga
ggacaaacttcatgggctgctgctaaagaaatctctaatttccttaaatacatggaaact
gaagataatattaaggtgtggtttaacaataaaggctggcatgctatggttagtttcctc
aatgtagccaataatgcaatcctcagagctaatctgaggactggccaagaccctgaggaa
catgggatcactgctataaaccatcctctgaacctcaccaaggagcaactctctgaagtc
actgtactgaccacttcagtggatgctgttgttgccatctgtgtgatttttgccatgtcc
tttataccagccagttttgttttatacctgatccaagaacgtgtaacaaaagccaaacat
ctccagtttgtcagtggtgtgagccctgttacctattggctaactaacttcatgtgggac
atagtgaattatgcactgagtgctgggatggttgtggctatattcgctggattcaacaag
aaagcatacgcctctccaaccaacctccctgtgctcgtgtccttgctgctcctgtatggg
tgggcagtaattcccatgatgtaccctgcttcttctttcttcagtatccccagcactgct
tatgttgcattgtcttgtattaatctctttgtgggaatcaacagcagtgccattacattc
atcctggaattatttgagaataacccatctttgctgaaatttaataaaacattgaaaaat
gtactgcttgtcctcccacatttttgtttgggccgtggactcatcgacttggccatgaac
caagctgtgactgaagtatatgcaaggtttggtgaggagcatgtttctaatccctttcag
tgggactttgttggaaagaacctggctgccatggctctgcaaggagttgtgttcttcttt
ctgaatctctttatgcagcaccgttttttctccacaagatggtttgccgatactgccatg
tcacctattattaatgaagatgaggatgttgcagaagaaagaaaaagaattatgaatgga
ggaaacaaaacagatatcttacaattacaagaactgaccaagatttatgcaggtcgacac
aagcccgcagtggacagactctgtgttggcatccgtcccggagagtgctttggccttttg
ggagtgaatggtgctggcaaaacaacaacattcaaaatgctgactggagatactgatgtg
acatctggagatgctgtagtggctggcaatagtatattgacccacatttctaatgtgcat
caaaacatgggatactgccctcagtttgatgccattgatgatctgctcacaggacgagaa
cacctctatttatatgcacgcttgcggggggttccagcagaagaaatcaagagggttgct
gaatggggcatccagaagctgggacttcctatgtacgcagaccacctggcagggacctac
agtggtggcaacaagcgcaagctctccactgccattgccctgataggctgcccaccactt
gtcttgctagatgaaccgacgactgggatggaccctcagtcccggcgcctcctgtgggac
tccattgttggcgtgctcagggagggacgagcggtggttctaacctcacacagtatggaa
gaatgtgaagccctctgtactcgtttagccatcatggtacaaggcaccttcaaatgccta
ggcacaattcaggagctaaaatacaagtttggagatggctacattgtcaccctgaaaatc
aaagctccaaagtctgggctgcctccagatcctgctcctgctgagaaattcatacacatc
aacttcccagggagtttacagagagagaaacactacaacatgctgcagtatcagatttgc
tcttcctctctggctaagatttttcgattaataatctccaataaggaaaatttgcatatt
gaagaatattctgtgtctcaaacaacattagatcaggtttttgtgaactttgctaaagag
cagatggaggatgaggaaattgctttgcatccgcgtgcagctggagccagccgagaagcc
aaggtgtccccagctctgcatcagcaggcagttgcatag
DBGET
integrated database retrieval system
