Sturnus vulgaris (common starling): 106857266
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Entry
106857266 CDS
T08833
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg04382
Cornified envelope formation
svg04510
Focal adhesion
svg04512
ECM-receptor interaction
svg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106857266 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106857266 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106857266 (COL4A2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106857266 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svg04147
]
106857266 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
svg00536
]
106857266 (COL4A2)
Exosome [BR:
svg04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106857266 (COL4A2)
Glycosaminoglycan binding proteins [BR:
svg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106857266 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
106857266
NCBI-ProteinID:
XP_014738724
LinkDB
All DBs
Position
Unknown
AA seq
1715 aa
AA seq
DB search
MDISQLPSARIFLCQDTGLLLILMEVVLSAVKVDAGGKKYTGPCGGRDCSGGCQCFPEKG
SRGQPGLLGSQGFTGPPGLMGIPGVQGPKGHKGERGYPGITGPKGEVGQRGVTGFPGADG
IPGHPGQPGPRGKPGHDGCNGTAGDPGDFGIPGVSGFPGSIGVQGPKGQKGEPYIVAPEI
ISRHRGDPGDSGFIGFPGPPGTLGIQGPIGPRGQRGRPGPPGPPGPPGPQGNRGLGFYGE
KGEQGPPGPPGPPGLPTRELMGVPSDKHKGERGDPGPRGEAGIPGVLLFPLEKGEEGVMG
YPGQRGLPGISGFPGLSGERGFPGFDGPPGGHGPRGSKGELGEMGPPGPDSYFPSRIPRK
GVRGDPGFPGVSGFPGDRGDEGDRGLPGLPGFSDADGDKPGLPGEMGPKGEKGEIGSPAY
FPGPPGLPGKDGSPGIRGPPGPAGAPGPLFGLKGREGTPGRFGTQGFPGPRGQKGPKGEE
GDCTTCLLTEELRRGPTGPRGPPGFPGTSGQPGRKGEPGDQGQHGLPGFPGAKGFSGPAG
FPGRKGEKGDSLHITTKGTKGIRGDPGLPGISGEDGFPGRDGLDGLPGQPGLPGDAIRGF
PGDPGYPGELGPKGFPGEAGLPGEGFPGPKGFRGPPGDQGQSGNPGAPGLPGLPGEPGQL
DCGQVTEDFPRGDATEPIWSGAGCVRPPKGSQGRPGVPGATGAKGARGFPGDPGPMGFPG
LNGTRGDPGREGFPGPPGFTGPRGDRGPNGLPGLQGHPGLTGKSGAPGAPGPKGLPGDVL
GAAAGSRGDAGLPGFPGLKGAPGDQGVPGARGADGSPGLPGAKGDPGPQGLPGLMGLPGI
PGTQGFPGPPGNRGPDGGPGSQGPLGPPGARGEDGEQGFPGPVGLKGLSGDKGDMGLTGL
PGIRGVTGPPGISGMDGFPGDKGLKGSPGIDGFKGMTGLKGRPGIKGIKGEFGPLGARGD
KGSQGARGFKGDRGDQGPPGEPPKLMPSMMMEVKGEKGDAGERGTKGLFGLKGSKGMPGL
PGKTGTPGSPGYPSYVAGVKGDIGAKGLTGVKGYPGPAGSPGIRGFPGTTGVRGEKGIPG
ISGHFGTPGTHGEIGDRGDTINLPGMPGLKGEVGVPGLTGIRGGVGPKGEGGDPGFPGIE
GLKGIQGVPGSVGQEGLPGLVGPPGQQGSPGTPGFPGEKGTPGWPGLPGQAGQPGLRGIS
GLHGLPGTKGLPGSPGPDGYGSAGFPGAVGDKGEAGEPSRVEGSRGPPGQKGDRGVPGVP
GPFGIPGQEGFPGPPGISNISGYPGDKGSRGLDGVPGYPGPQGQPGIPAPPGSKGESGQT
GRTGEIGPKGSRGDPGSAGRPGLPGFPGPKGPRGEQGVIGFMGTVGFPGDLGPIGPKGDR
GMTGFQGPPGSPGLPPLPPRLVAEQGSPGPRGSIGPQGSPGDLGPQGPPGDPGFRGSPGE
PGLQGRGGIPAPPGSRGEQGGMGFQGPVGFEGQPGRPGSPGPPGMPGRSVSMGYLLVKHS
QSDQEPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLSRFSTMPFLYCNPGDICY
YASRNDKSYWLSTTAPLPMMPVAEEDIKPYISRCSVCEAPAVAIAVHSQEASIPHCPEGW
RSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWL
TTIDQPFQSKPSGDTLKAGLIRSHISRCQVCMKNL
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atggacatctcgcagcttcccagtgcacgtattttcctttgtcaggatacggggcttttg
ctgatcctgatggaagttgtgctgtcagccgtcaaagtggacgctggtggaaagaaatac
acaggaccgtgcggaggcagagactgcagtggaggatgtcagtgtttccctgaaaaagga
agccgcggccagccaggactccttggatcacagggattcactggaccaccaggattgatg
gggatcccaggagtgcaaggtcccaaaggtcacaaaggtgaaagaggatacccaggaata
actggacctaaaggagaagtgggacaaagaggagtcactggattccccggggcagatggc
attcctggtcatccaggccagccaggaccaagggggaaaccaggtcatgacggctgtaat
gggacagcaggtgaccctggtgactttggaattcctggagtctctggtttccctggtagc
attggagtccaggggcccaagggccagaagggagagccgtacatcgtagccccggagatc
atcagccgacacaggggagatcctggggattcagggttcatcggttttccaggacctcca
ggtacgctgggtattcaaggacctattggtccaagaggacagcggggaagaccaggacca
ccaggacccccagggcccccaggaccacaaggcaacaggggccttggcttctatggagaa
aaaggtgaacagggccccccaggtcctccaggtccaccagggcttcctacaagagaactg
atgggtgtcccctctgacaagcacaagggtgaaagaggagaccctggaccaagaggggaa
gctggaattccaggtgtgcttctctttcctctcgaaaaaggtgaagaaggggtaatgggc
tacccaggacaaaggggactgcctggcatcagtggttttccaggactcagtggagaaaga
ggttttccaggatttgatggtccacctggtggccatggtcccagaggaagcaagggggag
ctgggcgagatgggtcctccagggccagattcctattttccttcccgcatcccaaggaaa
ggtgtaagaggtgatccaggcttcccaggtgtttctggattcccaggagaccgaggagat
gagggtgatcgtggattgcctggtcttcctggattttctgatgcggatggggataagcca
ggcttacctggagaaatgggaccaaaaggtgaaaagggtgaaataggatctcctgcttat
tttccgggaccgcctgggcttcctggtaaggatggctcgccaggaattcgtggtccacct
ggtcctgctggagcccctggtcctctctttggattaaaaggacgagagggaacaccaggt
agatttggtacacaaggtttccctgggccaagaggacaaaaaggacctaaaggtgaagaa
ggggattgcacgacatgccttttgactgaggaactcagaaggggccctactggtccccgt
ggccctcctggctttccaggaacctctggccagcctggaaggaaaggagaacctggtgat
caaggacaacatggtcttcctggcttccctggagcaaaaggattttcgggtccagctgga
tttcctggacggaaaggcgaaaaaggagactctttacacataactacgaaaggcaccaaa
ggaatccgaggagatcctgggctgcctggaatcagtggtgaagatggtttcccaggcaga
gatggattagatggtttgccaggacagcctggccttccgggtgatgctatcagaggtttc
cctggtgatcctggttatccaggtgaattaggtccaaagggctttccaggagaagcaggc
ctgccaggtgaaggatttccaggtccaaaagggttccggggtcctccaggtgaccaagga
caatctggaaacccaggagctccaggtctgcctggtctgccaggggagcctggccaacta
gactgtgggcaggtcactgaagactttcctagaggagatgcaaccgaaccaatatggtca
ggtgcaggctgtgtaaggccaccaaagggatcccaaggaaggccaggagtgccaggagcc
acaggtgcaaaaggtgcaagaggattcccaggtgatccaggtccaatgggtttcccaggg
ctaaatggtacacgaggtgatccaggtcgggaaggatttccaggtcctccaggttttact
ggacccaggggagacagaggcccaaatggtctacctggactgcagggacacccaggcctt
acaggaaaatcgggagctccgggagcaccaggaccgaagggccttcctggtgacgtttta
ggagcagcagcaggttcccggggggatgccggcctgcctggcttcccagggctgaaaggt
gccccaggagatcaaggagtaccaggagctagaggagccgatggtagcccaggtttgcca
ggagccaaaggagatccagggccacaaggtctccctggtttgatgggattaccaggaata
ccaggaacacaaggattccctggtccaccaggaaaccgtgggccagatggtgggcctggc
tcccaaggacctcttggtccacctggtgctaggggagaagatggtgagcaaggttttcct
ggccccgtgggcctgaaaggtctgtctggtgacaaaggtgacatgggtctcacaggatta
ccaggtatacgtggtgtgactggtccccctggcataagtggaatggatggctttccagga
gataaaggcttgaaaggttcacctggcattgatggtttcaaaggcatgacaggcctaaaa
ggaagaccaggcatcaaaggaatcaaaggagaatttggcccacttggggctcggggagat
aaaggctcacagggtgcacgtggcttcaaaggtgaccgtggggatcaaggccccccagga
gagcctccaaagctcatgcccagcatgatgatggaagttaaaggtgaaaaaggagatgct
ggagaaaggggcacgaagggattatttggcttgaaaggtagcaaggggatgccaggcctt
cctggaaagacaggaaccccaggatcccctgggtatcccagctacgtggctggtgtgaaa
ggagacattggcgcgaaagggctgacaggtgtgaaagggtatcctggtcccgctggttct
cctggcatcagaggcttccctggcaccacaggagtcagaggagaaaagggcattccaggg
atttcaggccattttggtactcctggcacacatggagaaataggtgatcggggagatact
ataaacttaccaggaatgccaggccttaaaggggaagttggtgtgccaggcttaacaggc
ataagaggaggtgtgggaccaaaaggagaaggtggtgatcctggtttcccaggcattgaa
ggcctcaagggcatacagggtgtccctggctcggtgggacaggaaggtttgccaggactg
gttggccccccagggcagcaaggaagccctgggacacctggatttccaggggaaaaggga
actcccggctggcctggcttaccaggacaagcaggccagcctggcttaagaggaatcagt
ggactgcatggcttaccaggcactaagggcttaccaggatcaccaggtccggatgggtac
ggctctgccggcttcccaggtgcagtgggtgacaaaggagaagcaggagagccaagcaga
gtggaaggcagccgaggacctccgggccagaagggagacagaggtgttccaggtgtccca
ggaccctttggtattcctgggcaggaaggatttccagggcctcctgggatttcaaatata
tcaggatatcctggtgataaaggctcccgaggtctagatggagtgccaggctatccagga
ccacaagggcagcctggaatacctgctccacctggaagcaaaggagaaagtggacaaaca
ggtaggactggagaaattggcccaaaaggaagtagaggtgatcctggatcagcaggaaga
cctggcctgcctggattccctggaccaaaaggtcctaggggtgaacaaggtgtcattggc
ttcatgggtacagtaggatttccaggtgatctgggacctattggacccaagggagacaga
ggaatgactggcttccagggacctccaggctctcctgggctgccccctcttcctccaagg
ctggttgctgagcaaggttcaccaggtccccgtggaagtataggacctcagggaagccca
ggagatttgggacctcagggcccaccaggagatccaggtttcaggggctcacctggagag
ccaggactccagggcaggggtggcattccagctcctcctggctccagaggggaacaagga
ggaatgggatttcagggtccggtgggatttgaaggtcagccaggccgccctggtagccct
gggccaccaggcatgccgggtcgcagtgtgagcatgggctacctgctggtgaagcacagc
cagtccgaccaagagccaatgtgcccagttggcatgaacaaactctggagtggatacagc
ctactgtattttgaaggacaagagaaagcacacaaccaggatctagggctggctggctca
tgtctgtctcgttttagcaccatgccattcctctactgtaaccctggggatatttgttac
tatgcaagtcgaaatgataaatcctactggctctcaactacagcacctcttccaatgatg
cccgtggcagaagaagacattaagccatatatcagtcgctgctccgtttgtgaggcccca
gctgtggcaattgctgtccacagccaagaagcttctattcctcactgccctgaaggctgg
cgcagtctgtggattggatattccttccttatgcacactgctgctggtgatgaaggtgga
ggacagtcgctggtttctcctgggagctgcctggaagatttcagggccactcctttcatc
gaatgcaatggtgcacgtggaacctgtcactactttgcaaacaaatacagcttctggctc
accaccatcgaccagcccttccagagcaagccctcgggagacacactcaaggcaggactc
atccgaagccatatcagcagatgtcaagtctgcatgaaaaacttatag
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integrated database retrieval system