Sturnus vulgaris (common starling): 106857306
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Entry
106857306 CDS
T08833
Symbol
HERC4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106857306 (HERC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svg04121
]
106857306 (HERC4)
Enzymes [BR:
svg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
106857306 (HERC4)
Ubiquitin system [BR:
svg04121
]
Ubiquitin ligases (E3)
HECT type E3
106857306 (HERC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
106857306
NCBI-ProteinID:
XP_014738775
LinkDB
All DBs
Position
Unknown
AA seq
1056 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGAVYTCGC
NDLGQLGHEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPG
TEECVRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQSS
PQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLR
SQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSVVTQIT
CGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGSWIPYSTQSPMSTDTEE
CYCVKRIFSGGDQSFAHYFYPQNMVPPDDFRYPDFLKQIWTVNETFIQRLLSFPSGRLPV
ELANEIDGTFSSAGCLNGSFLALSNDDHYKTSTRFSGVDMNAARLLFHKLIQPEHTHISQ
QVAASLEKNLIPKLTSSLPDVEALRLYLTLPECPLMSDENNFTTLAIPFGAAILNLEKAP
LKVLENWWSVLEPPLFLKIVELYKDVVVHLLKLCKMGLPPSDRRILTNFLHTAFRVLEIL
HRVNERGQVIQYDRFYIHEIQDLIDIRNDYANWFQQQVLGMDVNHGLTELTDIPVIICTY
PFVFDAQAKTTLLQTDAIIQMQMAVDQAHRQNLSSLFLPVFESVNPCLILMVRRDNIVGD
AVEVLRKTKNVDYKKPLKVIFVGEEAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEESRL
IWFSDKTFEDSDLFHLIGVVCGLAIYNFTIVDLHFPLALYKKLLNKKPSLDDLKELMPDV
GRGMQQLLDYPEDDIEEAFCLNFTITVENFGTTEIKELVPKGADIPVVKQNRQDFVDAYV
DYIFNRSVASLYSAFHEGFHKVCGGKVLQLFQPSELQAMVIGNTNYDWKELEKNTEYKGE
YWADHPTIKIFWEVFHELSLEKKKQFLLFLTGSDRIPILGMKCLKLVIQPTGGGEDYLPV
AHTCFNLLDLPKYTDKETLKSKLIQAIDHYEGFSLV
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgctggggcaatgcatcttttggacagcttggattgggtggaattgatgaagag
attgttttagaacccagaaaaagtgactttttcctgaataaaagggtcagagatgtagga
tgtggactgagacacactgtttttgtcctggatgatggggctgtttatacatgtggatgc
aacgatctaggacaactaggccatgaaaaagccagaaaaagacctgagcatgttggtgca
ctggatgcccaaaatattgtagctgtgtcatgtggagaagcccacactcttgcattaaat
gacaaaggtcaggtatatgcctggggtctggctactgatggacagcttggcttgccagga
acagaggaatgcgtcagagtgcccagaaatattaaaagtttatcagagatccagattgtt
caagttgcttgtggttattatcactcactagcactctcaaaaggaagtgaagtgttttcc
tggggacaaaacaaatatggccagctgggcttaggttatgagtataaaaaacaaagctca
ccacaaatgattaaatctctgctgggaatcccttttgcacagattgcagcaggaggagct
cacagttttgtactcactctttctggagccatctttggatggggacgcaacaaatttggg
cagctgggcctaaatgatgacaatgacaggtatgttcctacactgctgaaatccctgaga
agtcagaaggttgttcatatatgttgtggagaagatcacactgctgcccttacaaaggaa
ggtggagtttttacatttggagctggaggctatggtcagttgggtcataactctaccagc
catgagataaacccaaggaaagtttttgagcttatgggaagtgttgtcacacagatcacc
tgtggcaggcagcacaccactgcatttgtcccttcttctggaagaatttactcttttggg
cttggaggcaacgggcagttagggacagggaccaccagtaacaggaaaagtcccttcaca
gtgaaaggaagctggattccctacagcactcagagccccatgagcacagacactgaggag
tgctactgtgtaaagagaattttctctggtggggaccaaagttttgcacactacttttat
ccacagaacatggtgccaccagatgattttagatatcctgactttttgaagcagatctgg
actgtgaatgaaacgtttattcagagattactgagtttcccatctggaagacttcctgta
gagctagctaatgaaattgatggaacattctcctcagctgggtgcctgaatgggagcttt
ttggcattgagcaatgatgatcattacaaaaccagcactagattctcaggggttgatatg
aatgctgctagattactctttcacaaactcatacagcctgagcatactcacatatcacaa
caggtggcagctagtttggaaaagaaccttattcccaaattgaccagctccttaccagat
gttgaagctttgaggctgtatctcactctgccagagtgcccactgatgagtgatgaaaac
aatttcacaacgttagctattccttttggagcagctattctgaacctagaaaaagctcct
ctgaaagttctcgaaaactggtggtctgtacttgaacctcccttgttcctcaagatagtg
gaactctacaaggatgtcgtagttcaccttttgaaactgtgcaagatgggccttccacct
tctgacagaagaatactcaccaatttcctacacacagccttcagagttctggaaatactg
cacagagtgaatgaaagaggacaagttatacagtatgacagattttacattcatgagata
caagatttgatagatatcagaaatgactatgccaactggttccagcagcaggtactggga
atggatgtcaaccatggattaactgagttaacagatattcctgttataatttgcacatac
ccatttgtatttgatgcccaggcaaagacaactctcttgcaaacagatgcaatcatacag
atgcagatggctgttgaccaggcccacaggcagaatttatcttctctcttcctgccagtc
tttgaatctgtcaacccctgcctgatactgatggtccgcagggacaacatagtgggggat
gctgtggaggtgctcaggaaaaccaagaatgtggattacaagaagccactcaaggttatt
tttgtaggggaggaagctgtcgatgctggaggagttcgtaaagaattttttttgctcatc
atgagggaattgcttgatcccaagtatggaatgttcaggtattatgaggagtccaggctg
atctggttctctgataagacctttgaagacagtgacttgtttcatttgattggtgttgtc
tgtgggctagcaatatataattttactattgtagaccttcattttcctctggctttgtac
aaaaagctattgaataagaaaccatccctggatgacttaaaagaattgatgccagatgtt
ggcaggggaatgcaacagctactggactatccagaggatgacatagaagaagcattttgt
cttaattttactatcactgtggaaaattttggtacaacagaaattaaggagctggttcct
aaaggtgctgacattcctgtagtcaaacaaaataggcaagattttgtagatgcatatgtg
gattacatcttcaatagatctgtggcttccctatacagtgcattccatgaaggcttccac
aaagtatgtggagggaaagttcttcagctcttccagcccagtgagttgcaggcaatggtg
attgggaacacaaattatgactggaaagagctggagaagaatacagaatacaaaggagag
tactgggcagaccatcctacaattaaaatattctgggaggtttttcacgagttgtctttg
gagaagaaaaaacagtttttgttgtttctgacaggcagtgatcggattccaattcttggg
atgaagtgtctgaaattggtcatccagccaacaggaggaggagaggattatctgcccgta
gctcacacttgctttaatcttcttgatcttccaaaatacacagataaagaaaccctgaaa
tctaagttgatccaggctatagaccactatgaaggtttcagtttagtataa
DBGET
integrated database retrieval system
