Sturnus vulgaris (common starling): 106857383
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Entry
106857383 CDS
T08833
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106857383 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svg03041
]
106857383 (DDX46)
Enzymes [BR:
svg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106857383 (DDX46)
Spliceosome [BR:
svg03041
]
Complex A
U2 snRNP components
U2 related factors
106857383 (DDX46)
Complex B
106857383 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
106857383
NCBI-ProteinID:
XP_014738924
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRKREDRRSRSRDRDRRRERSRSRDKRRSRS
RDRKRQRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSSSPSKNRKTENRSRSKEK
TEGVEVSKEKKKDKDDKEEEKDKDATTNAVATENFDQNKLEEEMRKRKERVEKWREEQRK
KAMENIGELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEGNEVEDEELDPLDAYMEEVK
EEVKKFNMRSVKGGGGSEKKTGPTVTKVVTVVTTKKAAAESEKKKGELMENDQDAMEYSS
EEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNVYRLE
LEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQTQAIPAIMNGRDLIGIA
KTGSGKTIAFLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRV
VCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFD
MGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQH
VIVIEEENKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQY
DRDSIINDFKNGTCKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNK
GYAYTFITEDQARYAGDIIKALELSGNPIPTDLEKLWADFKDQQKAEGKLIKKSSGFSGK
GFKFDETEQALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKDMAAPGTS
NAPTPSAGNAEKLEIAKRLALRINAQKNLGAEAQVMVPFHFKDVMQQATNAILRGGTIQA
PTVSAKTIAEQLAEKINAKLNYVPIEKQEEEKQDGGQNESFKRYEEELEINDFPQTARWK
VTSKEALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRL
IKEELIRLQNSYQPTNKGRYKVL
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcgagtccaggcattatcggaagcgctctgcatcccggggacgctccgggagc
cgttccaggagtcgttccccatcggacaagaggaaacgtgaggacaggcgctccaggagc
cgggatcgggatcgcagacgggagaggtcgcgcagcagggacaagagaaggtctcggtct
cgggacagaaagcgtcaaagacgttcaaggagtagagaaagggaacggagccgagagaga
agacgatcgcggagccgagagaggaggcgctcgaggagcaggagtagagggagacggtct
cgatcctccagtccaagcaagaacaggaaaacagaaaacagatcaagatctaaagaaaag
acagaaggtgtggaagtttccaaagaaaagaaaaaagacaaagatgacaaagaggaggag
aaggataaagatgctaccacaaatgctgtggccactgagaattttgatcagaacaaacta
gaagaagaaatgagaaaacgaaaagaaagagtggagaaatggagggaagaacagcgcaag
aaggcaatggaaaacataggagagctaaaaaaagaaattgaagagatgaaacaggggaaa
aaatggagtttagaagatgatgatgatgatgaagaggaaactgcagaaggagaaaaagaa
ggcaatgaggttgaggatgaggagttagatcctttagatgcttatatggaagaagtaaaa
gaagaggtcaagaagttcaatatgagaagtgtgaaaggtggaggtgggagtgaaaagaaa
actggaccaactgttaccaaggtggtaactgtggtgacgaccaaaaaggcagctgccgag
tcagaaaagaagaaaggggaactcatggagaatgaccaagatgcaatggagtattcctca
gaagaggaggaagttgatcttcagactgccctgactggctatcagaccaagcagagaaag
ctgctagaaccagtggatcatggaaagatagaatatgaacctttcaggaagaacttctat
gttgaagtaccagagctagctaaaatgactcaagaagaggtaaatgtctaccggctggag
ctggagggaattacagtcaagggaaaaggctgtcccaaaccaataaaaacctgggtacag
tgtggtatttccatgaagattctcactgccctcaaaaaacatggctatgaaaagcccact
ccaattcaaacccaggctatcccagcgattatgaatggacgggatttgattggcattgct
aaaacaggaagtggaaaaactattgcatttctgttgcccatgttcagacacattatggat
cagagagcactagaagaaggagaaggtcccatagccgtcattatgacacctacacgtgag
ttggctttgcagattaccaaggagtgcaaaaaattctcaaagacccttgggcttcgagtt
gtgtgtgtttatggaggaacaggaatcagtgaacagatagctgaactcaaaagaggtgct
gaaattattgtttgcacacctggacgtatgattgacatgttagcagctaacaatggtcgg
gtgacaaacctccgtagagtcacatatgttgtacttgatgaagctgacagaatgtttgac
atggggtttgagcctcaggttatgcgcattgtagacaacgtcaggcctgaccgtcagact
gtcatgttctctgctacttttcccagagctatggaggccctggctcgcaggatcctcagt
aaacctatagaggtgcaggttggaggcagaagtgttgtctgttctgatgtggagcaacac
gtgattgtcatagaagaggagaacaaatttctgaagctactggagctactgggacattat
caggagaaaggatctgttatcatatttgtagataagcaagaacacgctgatgggttgttg
aaagatttaatgagggcctcttatccttgcttgtctcttcatggaggtattgatcagtat
gacagggacagcatcattaatgacttcaagaatggaacctgcaaacttctggtggccaca
tctgtagcagcgaggggcttggatgtgaagcagctgatgctggtggttaattacagctgt
cccaaccattatgaggactatgtgcaccgagcaggccgcactgggcgagctggcaataaa
gggtatgcatatacattcattactgaggatcaggcacgttatgctggtgatatcattaag
gctttggaattgtctgggaatccaattcctactgatctggagaagctctgggctgacttc
aaagaccaacagaaggctgagggaaagctgattaaaaaaagcagtggattctctggcaaa
ggttttaaatttgatgaaacagaacaggctttggctaatgaaagaaaaaaactacaaaaa
gcagctcttggcttgcaagattcagatgatgaagatacagctgttgatattgatgaacaa
attgaaagcatgttcaattcaaagaaaagagtaaaagacatggcagcaccaggcacatca
aatgctcctacaccatcagctgggaatgcagaaaaattggaaatcgcgaaaagattggct
ttgagaatcaatgcccaaaagaatcttggagcagaggcacaagtcatggttcccttccac
tttaaggatgtgatgcagcaggctacaaatgctatcctgagaggaggcacaattcaagct
cctactgtgtctgccaagaccattgccgagcaactggctgaaaaaatcaatgccaagctc
aattatgtacccatagagaagcaggaggaagagaaacaggatggaggacagaatgaatcc
ttcaaaagatatgaagaggaattagagatcaatgacttcccacagactgccagatggaaa
gttacttccaaagaagcgctgcagagaatcagtgaatattctgaagctgccattacaatc
agggggacttacttccctccaggcaaagaacccaaggaaggagaacgaaagatttatttg
gctatagaaagtgccaatgaactggctgtacagaaagcaaaggcagaaatcacacgactt
ataaaagaggagctcatcagattgcaaaattcttaccaaccaaccaacaaaggaagatac
aaagttctatga
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integrated database retrieval system
