Sturnus vulgaris (common starling): 106857445
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Entry
106857445 CDS
T08833
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
svg
Sturnus vulgaris (common starling)
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
svg04040
]
106857445 (TRPA1)
Ion channels [BR:
svg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106857445 (TRPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
106857445
NCBI-ProteinID:
XP_014739023
LinkDB
All DBs
Position
Unknown
AA seq
1126 aa
AA seq
DB search
MKRSLLRLCRAREKAAAASAYQGVVCEADAASVASQDVFKVISDGSACRLRSFIKKNRSG
LTKVDELNATPLHHAAEGGQIELMQLIIDDSSCEVLNVMDSSGNTPLHWATKKNQVESVR
LLLSRGANPNILNSNMMAPLHMAVQSLHNEIVKILVQHSSTDVNLEGEAGNTPIIVACYK
DNPEALTLLIENGGKICKRNKTGCMPIHAAAFSGAKTCLEILLKKGEELGHSAKTHINFT
NNGKCSPLHLAVQSGDLEMIKMCIEFGAQIDLKQNEKCTALHFAATQGATEIVKLMMSSY
AGEESIIDAVDGNKETLLHRTALFDHYELAEYLISMGANIDSVDIEGRSPLLLATSCASW
KIVNLLLSKGANVSLKDHLGRNFLHLTVLQPGGLQHLNEKYLQMEHIKNLVVDEDNEGCT
PLHYACRQGVALSVNNLLSLNVSIYSKSRDKKSPLHFAASYGRINTCQRLIRDMKDTRLL
NEGDKKGMTPLHLAAQNGHEKVVQFLLKRGALFLCDYKGWTALHHAAFGGYTRTMQIILD
TNVKCTDRVDEEGNTALHLAAREGHAKAVRLLLDYGAKILFNKAVASFFHEAIHNRRKDV
VSAVILHKRWEEAVVTFSHYSTANKCPLLEMVEYLPDSFKLVLDNCIIESSEEKTSRDFY
IEYNFRYLQCPLTLNKKLKDDEDIFYEPLTTLNAMVRHNRMELLSHPVCKEYLLMKWMAY
GFRAHLMNLGIYSLGLIPLTLLVTHIQPGRPLNGTELYEARPLEYEDSYFTRVCMCLVLI
MSLLGICKEIFQLIQQKLKYLLDYSNLLDWTIYTTSIIFVSSLFINTPAHLQWECGAIAV
YLSWMNFLLYLQRFENYGIYVVMFWEILRTLIRIAVVFFFLILAFGLSFFVLLGSQQTYS
TPLLSVMKTFAMMLGDINYHDAFLDPLLSSELPYPFLSYTVLIIFTLLIPILLMNLLIGL
AVGDIAEVQKYAALKRIAMQVNLHTNLEKKLPFWFLSRVDQESITVYPNRPRYCGFMSVF
QYCFGCEDSTTYAQSPDTTLELEVLKQKYRLKDISTLLEKQHDLIKLIIQKMEIVSEAED
EDSNDLFQHKFRKRQLEHKNSKWDTVLKAVKTNVPNPSTEKNNTFF
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctctctgctgcggctctgccgggcgcgggagaaggcggccgcggccagcgcc
taccagggcgtcgtgtgcgaggccgatgccgcctccgtcgcctcgcaggatgtcttcaag
gttatttcagatggaagtgcctgtaggctacggagcttcattaagaagaatcgttctggg
cttacgaaagtggatgagttgaatgccaccccactgcatcacgctgcggaagggggacaa
atagaactaatgcagttgatcatagatgattcttcctgtgaagtattaaatgtgatggat
tcttctggaaataccccactgcattgggccacaaagaaaaaccaggtggaaagcgttcgt
ttgcttctcagcagaggagccaatccaaacattctcaattccaacatgatggcacctctg
catatggctgtgcagtccctgcacaatgaaattgtgaagattctagtccaacatagcagt
acagatgttaacttggaaggtgaagcagggaacacacccataatagtagcatgttacaag
gacaatcctgaagcactgacactcctgattgaaaatggaggaaaaatatgtaaacgaaac
aaaacaggatgtatgcctatccatgcagcggcattttcaggtgcaaaaacatgtctggaa
attcttttgaaaaaaggtgaagaattgggtcactctgctaaaacccacatcaattttacc
aataatggaaagtgcagtccacttcatttggcagttcagagtggtgaccttgaaatgatt
aaaatgtgcattgaatttggagcccaaattgatctaaaacagaatgaaaaatgcacagca
cttcattttgctgccactcaaggagcaacagagattgtaaagctaatgatgtcatcctat
gctggtgaggaatccataattgatgctgtagatgggaacaaggaaacattgcttcacaga
acagcactatttgatcattatgaactggcagaatatttgatttcaatgggggctaatatt
gatagtgttgacatagaaggtcgatccccgcttctgctggcaacttcctgtgcatcatgg
aaaatagtgaatttactgctttcaaaaggagcaaatgtatcattaaaagatcatcttggt
cggaatttcttgcatttgacggtattgcagcctggaggattacagcatctgaatgagaaa
tatctgcagatggaacatattaaaaatctcgtcgtggatgaagataatgaaggatgcact
ccattgcattatgcatgcagacaaggtgtggccctctctgtaaataatttactcagcctc
aacgtttccatctactctaagagcagggacaagaagtcgcccttacactttgctgccagc
tatgggcgcatcaatacttgtcaacgacttataagagatatgaaagacacaagacttttg
aatgaaggtgataagaagggaatgactccccttcatctggcagcccagaatggtcatgag
aaagtagttcagtttcttctgaagagaggagctctcttcctctgtgattataaaggctgg
acagccctgcaccatgctgcctttggaggatacactcgcacaatgcagatcattttggat
actaatgtgaagtgtactgacagagtggatgaagaagggaacacagctttgcacttggct
gcacgagaaggacacgcaaaagcagtgaggttacttctcgactatggtgcgaaaattctg
ttcaacaaagcagtagcttcttttttccatgaagcaatacacaacaggagaaaagatgtg
gtgtctgctgtcattctgcacaaaagatgggaagaagctgttgtgactttctctcactat
tccactgccaataagtgtcctttgctggaaatggttgaatatcttcctgattcatttaaa
ctggtgttggacaattgcataattgagtcgtcagaggaaaagacaagtcgagatttctat
attgaatataacttcagatatcttcagtgtcccttgacacttaacaagaaattaaaggat
gatgaagatattttctatgaaccacttaccactttaaatgccatggtgcgccacaatcgc
atggagctgctcagtcatcctgtgtgtaaagaatatttgcttatgaaatggatggcctat
gggtttcgagcacatctaatgaatttaggcatatattctcttggtctcatcccactgact
cttctggtcactcacatacaaccaggaagacctttgaatggaacagagctctatgaagca
agaccattagaatatgaggactcatacttcacaagggtgtgtatgtgtttagttttaatt
atgagtttactgggcatctgcaaagaaatatttcagctgattcagcagaaattgaaatat
ttgctggattactccaatctactggactggaccatttatactacaagcataatttttgtg
tcttctttatttattaatacaccagctcatttgcagtgggaatgtggagcaattgctgta
tacttgtcttggatgaacttcttgctttatcttcaacgatttgagaactatggaatctat
gttgtgatgttctgggaaattttgaggactttgattcggattgctgtggttttctttttc
ctgatactggcctttgggctgagtttctttgtccttttgggttcacagcaaacgtacagc
acacctctgctttctgtaatgaagacatttgcaatgatgctgggagacattaattaccat
gatgcattccttgatcctttactaagcagtgaattgccatatccattcctgagttacaca
gttcttattatatttaccttgcttattccaatccttcttatgaacttgctaattggtttg
gctgttggtgatatcgctgaagtacaaaaatatgctgcattgaaaaggattgcaatgcag
gtaaatctccacaccaacttggagaagaagctgccgttttggttcttgagtcgggtggac
caggaatcaatcactgtgtatcccaacaggccgagatactgtggatttatgagtgtgttc
cagtattgctttgggtgtgaggactctaccacatatgcacagagccctgatacaacacta
gaattggaagttctgaagcagaaatacagactcaaagatatatcaacattgttggaaaag
caacatgacctcattaaactgatcatccaaaaaatggagatagtgtcagaggctgaggat
gaagacagcaacgatttatttcaacacaaatttaggaaaaggcagttagaacacaagaat
agtaaatgggatacagtgttaaaagctgttaaaacaaatgtgcctaacccaagcacagaa
aagaacaataccttcttctag
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