Sturnus vulgaris (common starling): 106858375
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Entry
106858375 CDS
T08833
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
svg
Sturnus vulgaris (common starling)
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svg03016
]
106858375 (TRMT13)
Enzymes [BR:
svg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
106858375 (TRMT13)
Transfer RNA biogenesis [BR:
svg03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
106858375 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-U11-48K
Methyltransf_32
OrgC
DUF7077
Motif
Other DBs
NCBI-GeneID:
106858375
NCBI-ProteinID:
XP_014740488
LinkDB
All DBs
Position
Unknown
AA seq
443 aa
AA seq
DB search
MIPAPGRRFCGEHGHEEEQNDRKRIPCPLDPKHTVYEDQLQKHLKKCNSREKPKPVYFVQ
DINAGLKDVAEISEKQVPLSSLSIEELQNLIIKLKKASKGLELHLKEQILSHQALQEALN
DPKNGESAFKHLKQQASILGNMEKLHLLGPGRCFVEFGAGRGKLSHWVDIALENVESVQF
LLVERATTRFKVDGKHKRRDSMFERLQVDIQHLCLNKVPVLEKKRLPVVGIGKHLCGAAT
DLALRCLVESYTICCDGEDKEPAPKRCRAAQTEVAPHKSVGNESTTEDHKPVAGIVIALC
CHHKCDWTHYVGREFFKSVGLGPVEFHYFQRMSSWATCGMRETTSKASTSEDSEDQTNDT
EEHEQALSRTESGSDTLQGILSVEERKEIGWLCKRLIDHGRVEYLQQQGYKAALQYYTES
AVSLENVLLTAVPNPSLIPEPNT
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggcgcccggcaggcgcttctgcggggagcacgggcacgaggaggaacaaaat
gacagaaaaagaattccgtgccctcttgatccaaaacacactgtatatgaagaccaacta
caaaagcatttaaaaaaatgtaactcaagagagaagccaaagcccgtctactttgttcaa
gatattaatgctggtttaaaagatgtagcagaaatatcagaaaaacaagttcctctatct
tctctatctattgaagagctgcagaacttaattatcaagttgaaaaaagcaagtaaaggc
ctggaacttcatctcaaggaacaaatactgtcccaccaggctttacaagaagccttaaat
gatccaaagaatggggaatctgctttcaaacacctgaaacaacaggcttctattttaggt
aacatggaaaaattgcatttacttggtccaggaaggtgttttgttgagtttggagctgga
cgaggaaagctgtctcattgggttgatattgccttagagaatgttgaaagtgttcagttt
ttgcttgtggaaagggcaaccacaagattcaaggtggatggaaaacacaaaaggagagat
tctatgtttgagaggcttcaagtagacattcagcacttatgtttaaataaggtacctgtt
ttggagaagaaaagactaccagtggtaggaattggcaaacatttgtgtggagctgcaaca
gatcttgctttaagatgcttggttgaaagctacaccatttgctgtgatggagaagataaa
gagcctgcaccaaaacgctgcagggctgctcagacagaggtggctcctcacaagtctgtt
ggtaatgaaagcaccacagaagaccataagcctgtagctggaattgttattgctctgtgt
tgccatcacaagtgtgactggacacattatgtaggcagagagttctttaaatcagtagga
ctgggaccagtagaattccattattttcagagaatgagtagttgggccacttgtggcatg
cgagaaaccacaagcaaagcttctacaagtgaagacagtgaagatcaaactaatgacaca
gaggaacatgagcaagcactcagcaggacagagagtggttctgatactttacaagggata
ctgagtgttgaggagcgaaaggagatcggttggctctgcaagcggctgattgatcacgga
cgggttgagtatttacaacaacagggatacaaggctgcactgcagtattacacagagtct
gctgtgtccttggagaatgtcctgttgacagctgtcccaaatccttctttgataccagag
ccaaatacctga
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