Sturnus vulgaris (common starling): 106858385
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Entry
106858385 CDS
T08833
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2
KO
K14407
cleavage stimulation factor subunit 2
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106858385 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svg03019
]
106858385 (CSTF2)
Messenger RNA biogenesis [BR:
svg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
106858385 (CSTF2)
U7-dependent histone pre-mRNA processing factors
106858385 (CSTF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
106858385
NCBI-ProteinID:
XP_014740500
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVN
PEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTSVPPLIPGNQQPVPGPGPGPGPGPGPGPNAQLNPQNTPSSQPQPI
GGMHVNGAPPLMQPPMQGGVPAPGQMAAPVQGPGPGPMAPGGGMQPQVGMPGAGPVPLER
GQGNLQLSPVGPARPASIERVQVPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTL
LSVTGEVEPRGYLGPPHQGAPMHHMPGHDSRGPPHEMRGGPMGEPRPLMGEPRGPLMDAR
GERGGMKYWSLPCVSSAVGRDPRGLEPRGLEPRGLEPRVMEARGLEPRVLEPRVLEARAM
EARGLEPRGLEPRGPGPNPRGPMPGGIQGPGPLNMGASGPQGPRQVPNMAGAGMQGGGIP
GAGVQGAGQPGGFSPGQSQVTPQDHEKAALIMQVLQLTADMQVMLPPEQRQSILILKEQI
QKSTGAP
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctgtcggtgcgggaccccgccgtggatcgttccctgcgctccgtgttcgtg
gggaacatcccgtatgaggccacggaagaacagctgaaggacattttctcggaggttggg
cccgtggtcagctttaggctggtgtacgacagggagacggggaagcccaagggctatggc
ttctgcgagtaccaggaccaggagacggcgctcagcgccatgcgcaacctcaacgggcgc
gagttcagcggcagggccctgcgcgtcgacaacgccgccagcgagaagaacaaggaggag
ctcaagagcttgggcacaggtgcacccatcatagagtcaccctatggggaccctgtcaac
ccagaggatgcccccgagtccatcagccgggcagtggccagcctgccacccgagcagatg
tttgagctgatgaagcagatgaagctgtgtgtgcagaacagcccccaggaagccaggaac
atgctgctccagaacccacagctggcttatgcactgctgcaggcccaggtggtcatgagg
atcgtggacccagagatcgcgctgaaaatcctgcatcgccagaccagtgttcctcctctg
atcccaggcaaccagcagccagtgccagggccagggcctgggccaggaccggggcctggg
ccagggcccaacgcgcagctgaacccacagaacaccccatcatcccagccacagcccata
ggcgggatgcacgtcaacggcgctcctcctttgatgcagccacccatgcaggggggggtg
ccagccccaggacagatggcagcccctgtgcagggcccaggccctggccccatggctcca
ggaggtgggatgcagccacaggttgggatgccgggtgcagggcctgtccccttggagcgt
ggacaagggaacctgcagctctcgcccgtgggacctgccaggcctgcgtctatcgaacgc
gttcaagtgcccatgccagacccgagggcccctatgcagcgtggacctctacctgctagt
ggcccgccgccccgaggccttttgggagatgccccgaatgaccctcgcggagggaccctg
ctctcagtcactggagaagtggagcccagaggttaccttgggccgccccaccagggagcc
cctatgcaccatatgcctggtcatgacagccgtggccccccccatgagatgaggggggga
cccatgggagaaccccgaccactgatgggagagccgcgggggcccttgatggatgctcga
ggtgagagagggggcatgaaatactggagcttaccttgtgtttcctctgcagttggaaga
gatccccgagggctggagccacgagggctggagccacgagggctggagccgcgggtgatg
gaggcgcgaggcctggagccacgggtcctggagccacgagtgctggaagccagggccatg
gaggccaggggcctggagccccggggcctggagcctcgagggcctggtcccaacccacgt
ggcccaatgcctggtgggatacagggtcctgggccacttaacatgggagccagtggcccg
caggggccccgccaggttcctaacatggctggggcaggtatgcagggaggaggcattcct
ggggcaggagtccaaggagctggtcagcctggaggctttagccctggacagagccaggtc
acaccccaggaccatgagaaggcagcactgatcatgcaggtcctgcagctgacagcagac
atgcaggtcatgctgcccccagaacaacggcagagcatcctcattctgaaggagcaaatc
cagaaatccacaggggcaccctga
DBGET
integrated database retrieval system
