Sturnus vulgaris (common starling): 106858607
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Entry
106858607 CDS
T08833
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03013
Nucleocytoplasmic transport
svg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106858607 (CASC3)
03015 mRNA surveillance pathway
106858607 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svg03019
]
106858607 (CASC3)
Messenger RNA biogenesis [BR:
svg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106858607 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
106858607
NCBI-ProteinID:
XP_014740858
LinkDB
All DBs
Position
Unknown
AA seq
722 aa
AA seq
DB search
MADRRRQRASQDSEDSEGSAASDSAGSAPGSPRSARSRSGSGSRSRSGSPRLPHRPPRGA
AGALGAGPRGRGAESASGAGGKSAAESECESEDGIEGDAVLSDYESAEDSEVEEEDYSEE
ESSKVELKQDSNDSCESAARGEKGNEKVDPKGAVTGERQSGDGQESTEPVEKKVGKKVPK
HLDDDEDRKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQ
APKTRQELIALYGYDIRSAHNPDDIKPRRMRKPRFGSPPQRDPNWSNERPPKPPRHQGAK
SPSAPPRSFNSRSSAGAGRMPPARNYPRMGGYKETRPGYRASEATVPHRNGEQAKQESSY
RGKRAEQSPSRDTSPELEVAHVHGSPGKEEGALENQTTAADAAQPPPDRPVEKKSYSRAR
RTRVKAGEAGKLAEEVPASEGLAPAIPKPTPAETSPPPAKSNWESPVESNVDGLEQEMTQ
MNLTEQNWSPGQSQFIPPRELRGIPNHMHVGTGPPPQFNRMEEMAVPGGRVKRYSSQRQR
PPVPEPAPPMHISIVEGHYYDPLQFQGPIYTHGENPAPLPPQGMIVQPEMHLPHPGLHPH
QTPPAMANPGLYPPPVSMPPGQPPPQQLLTPTYFSAPGVMNFGNPGYPYPPGALPPPPPP
HLYSNTQAQSQVYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEVVSRAPVNLSYL
NL
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcctcgcaggacagcgaggacagcgagggctcggcg
gcctccgacagcgccggctccgcgcccggctccccccgttccgcccgctcccgctcgggc
tctggatcccgctcccggtccggctcgccccgcctgccgcaccgcccgccgcgcggcgcc
gcgggggccctcggcgctgggccgcggggccgcggggccgagagcgccagtggggcgggg
gggaagagcgcggccgagtcggagtgtgaaagtgaggatggcatcgaaggagatgccgtg
ctctctgactatgaaagcgccgaggactcggaggtagaggaagaggattacagcgaggaa
gaaagctccaaggtggagctgaagcaggacagcaacgattcctgcgagtcggcggccaga
ggggagaaggggaatgagaaggtggatcccaagggagccgtgacgggcgagcggcagagc
ggggacgggcaggagagcacggagcctgtggagaagaaagttgggaagaaggttcccaag
cacctggacgacgatgaggatcggaagaacccggcctacatcccacgcaaggggctcttt
tttgagcatgacctccgagggcagacgcaggaggaggaggtcaggccaaagggtcgtcag
cggaagctgtggaaggatgagggacgttgggaacacgacaaattccgtgaggatgagcag
gcccccaagaccaggcaggagctgatagcactgtatggatacgacatccggtcagcccac
aaccccgacgacatcaaaccccggaggatgcgcaaaccacgctttggcagtccccctcag
cgagaccctaactggtccaacgagaggccccccaagcccccgaggcaccagggtgccaag
agcccttcggctcccccacggtccttcaacagccgcagctctgccggcgctggcagaatg
ccccctgccaggaactaccccaggatgggcggctacaaggagacccgtccaggctaccgg
gcttcggaggcgactgtcccacaccggaacggggagcaagccaagcaggagagcagctat
cgtgggaaacgtgcagagcagagcccgtcacgggacacgtcccccgagttggaggtggca
catgtccatggcagccctgggaaggaggagggggctctggaaaaccaaaccacggctgcc
gacgctgcgcagccgccaccggacagaccagtcgagaagaaatcttattcccgtgcaaga
aggaccagagtcaaggctggggaggcagggaagctggcagaggaagtgcctgcttctgag
gggctggctcctgcaattccaaaacccacgccagctgagacctcccctccaccagccaag
agcaactgggagtcaccagtggaatccaacgtggatggacttgagcaggagatgacccag
atgaacctgacagagcagaactggagcccagggcagtcccagttcatcccgcctcgggag
ctgaggggtattcccaaccatatgcacgtgggaactgggccaccaccgcagtttaaccgg
atggaggagatggcagtgccggggggccgtgtgaagcgctactcatcgcagcggcagaga
ccccctgtgccagagcccgcgccccccatgcacatcagcattgtggaaggacactactac
gacccattacaattccagggaccaatctacacccacggtgagaacccagccccgctgcca
ccccaagggatgattgtgcagccggagatgcacctccctcatccaggtttacacccccac
cagacgccccctgccatggcaaaccccggcctctaccccccaccagtgtccatgcccccg
ggccagcccccgccgcagcagctgctcactccgacttacttctccgcccctggagtgatg
aattttgggaatcctggctacccctacccccctggagctctgccccctccgccccctcct
catctctattccaacacgcaggcgcagtcccaggtctatgggggggtcacctactacaac
actgtccagcagcaggtgcagcccaagccctccccgccccgccggacgtcccagcctgtg
accatcaagccaccccctccagaggtggtaagcagggctccagttaatttgagttactta
aatctttaa
DBGET
integrated database retrieval system