KEGG   Sturnus vulgaris (common starling): 106858607
Entry
106858607         CDS       T08833                                 
Symbol
CASC3
Name
(RefSeq) protein CASC3
  KO
K14323  protein CASC3
Organism
svg  Sturnus vulgaris (common starling)
Pathway
svg03013  Nucleocytoplasmic transport
svg03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:svg00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    106858607 (CASC3)
   03015 mRNA surveillance pathway
    106858607 (CASC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:svg03019]
    106858607 (CASC3)
Messenger RNA biogenesis [BR:svg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     106858607 (CASC3)
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 106858607
NCBI-ProteinID: XP_014740858
LinkDB
Position
Unknown
AA seq 722 aa
MADRRRQRASQDSEDSEGSAASDSAGSAPGSPRSARSRSGSGSRSRSGSPRLPHRPPRGA
AGALGAGPRGRGAESASGAGGKSAAESECESEDGIEGDAVLSDYESAEDSEVEEEDYSEE
ESSKVELKQDSNDSCESAARGEKGNEKVDPKGAVTGERQSGDGQESTEPVEKKVGKKVPK
HLDDDEDRKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQ
APKTRQELIALYGYDIRSAHNPDDIKPRRMRKPRFGSPPQRDPNWSNERPPKPPRHQGAK
SPSAPPRSFNSRSSAGAGRMPPARNYPRMGGYKETRPGYRASEATVPHRNGEQAKQESSY
RGKRAEQSPSRDTSPELEVAHVHGSPGKEEGALENQTTAADAAQPPPDRPVEKKSYSRAR
RTRVKAGEAGKLAEEVPASEGLAPAIPKPTPAETSPPPAKSNWESPVESNVDGLEQEMTQ
MNLTEQNWSPGQSQFIPPRELRGIPNHMHVGTGPPPQFNRMEEMAVPGGRVKRYSSQRQR
PPVPEPAPPMHISIVEGHYYDPLQFQGPIYTHGENPAPLPPQGMIVQPEMHLPHPGLHPH
QTPPAMANPGLYPPPVSMPPGQPPPQQLLTPTYFSAPGVMNFGNPGYPYPPGALPPPPPP
HLYSNTQAQSQVYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEVVSRAPVNLSYL
NL
NT seq 2169 nt   +upstreamnt  +downstreamnt
atggcggaccggcggcggcagcgcgcctcgcaggacagcgaggacagcgagggctcggcg
gcctccgacagcgccggctccgcgcccggctccccccgttccgcccgctcccgctcgggc
tctggatcccgctcccggtccggctcgccccgcctgccgcaccgcccgccgcgcggcgcc
gcgggggccctcggcgctgggccgcggggccgcggggccgagagcgccagtggggcgggg
gggaagagcgcggccgagtcggagtgtgaaagtgaggatggcatcgaaggagatgccgtg
ctctctgactatgaaagcgccgaggactcggaggtagaggaagaggattacagcgaggaa
gaaagctccaaggtggagctgaagcaggacagcaacgattcctgcgagtcggcggccaga
ggggagaaggggaatgagaaggtggatcccaagggagccgtgacgggcgagcggcagagc
ggggacgggcaggagagcacggagcctgtggagaagaaagttgggaagaaggttcccaag
cacctggacgacgatgaggatcggaagaacccggcctacatcccacgcaaggggctcttt
tttgagcatgacctccgagggcagacgcaggaggaggaggtcaggccaaagggtcgtcag
cggaagctgtggaaggatgagggacgttgggaacacgacaaattccgtgaggatgagcag
gcccccaagaccaggcaggagctgatagcactgtatggatacgacatccggtcagcccac
aaccccgacgacatcaaaccccggaggatgcgcaaaccacgctttggcagtccccctcag
cgagaccctaactggtccaacgagaggccccccaagcccccgaggcaccagggtgccaag
agcccttcggctcccccacggtccttcaacagccgcagctctgccggcgctggcagaatg
ccccctgccaggaactaccccaggatgggcggctacaaggagacccgtccaggctaccgg
gcttcggaggcgactgtcccacaccggaacggggagcaagccaagcaggagagcagctat
cgtgggaaacgtgcagagcagagcccgtcacgggacacgtcccccgagttggaggtggca
catgtccatggcagccctgggaaggaggagggggctctggaaaaccaaaccacggctgcc
gacgctgcgcagccgccaccggacagaccagtcgagaagaaatcttattcccgtgcaaga
aggaccagagtcaaggctggggaggcagggaagctggcagaggaagtgcctgcttctgag
gggctggctcctgcaattccaaaacccacgccagctgagacctcccctccaccagccaag
agcaactgggagtcaccagtggaatccaacgtggatggacttgagcaggagatgacccag
atgaacctgacagagcagaactggagcccagggcagtcccagttcatcccgcctcgggag
ctgaggggtattcccaaccatatgcacgtgggaactgggccaccaccgcagtttaaccgg
atggaggagatggcagtgccggggggccgtgtgaagcgctactcatcgcagcggcagaga
ccccctgtgccagagcccgcgccccccatgcacatcagcattgtggaaggacactactac
gacccattacaattccagggaccaatctacacccacggtgagaacccagccccgctgcca
ccccaagggatgattgtgcagccggagatgcacctccctcatccaggtttacacccccac
cagacgccccctgccatggcaaaccccggcctctaccccccaccagtgtccatgcccccg
ggccagcccccgccgcagcagctgctcactccgacttacttctccgcccctggagtgatg
aattttgggaatcctggctacccctacccccctggagctctgccccctccgccccctcct
catctctattccaacacgcaggcgcagtcccaggtctatgggggggtcacctactacaac
actgtccagcagcaggtgcagcccaagccctccccgccccgccggacgtcccagcctgtg
accatcaagccaccccctccagaggtggtaagcagggctccagttaatttgagttactta
aatctttaa

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