Sturnus vulgaris (common starling): 106858700
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Entry
106858700 CDS
T08833
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106858700 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svg03041
]
106858700 (PRPF38B)
Spliceosome [BR:
svg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
106858700 (PRPF38B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
106858700
NCBI-ProteinID:
XP_014740991
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MANNSPAVANCQGQQAAQHPPGAVPPVQQPLQSGGPKPAASGKQGNVLPLWGNEKTMNLN
PMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGV
GTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWFE
SFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKAIDQQIKSRPRK
IKKDGKEGMEEIDRHAERRRSRSPRPRSISPRRSPRRSRSRSHHREGHGSSSFDRELERE
RERQRLEREAKEREKERRRSRSTDRSLERRRSRSRDRYRSRSRSRDRKGDRRDRDREREK
ENERSRKKERDHDKERGSEREKDRSRERSKERKSKGDTEERRHKDDKDEKKHRDDKRDSK
KERKHSRSRSRERKHRSRSRSRNTGKRSRSRSKEKSSKHKNENKEKSNKRSRSRSRGRTD
SVEKSRKRDQSPSKEKPRKRSRSKERSHKHDHSDSKDHSDKHDRRRSQSTERESQEKQQK
NKDETV
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaacagccccgcggtggcgaactgccaggggcagcaggcggcccagcacccc
cccggagccgtcccgcccgtgcagcagccgctgcagagcgggggcccgaagccggcggcc
tcgggcaagcagggcaacgtgctgccgctgtggggcaacgaaaagaccatgaacctgaac
cccatgatcctcaccaacatcctttcgtcgccctacttcaaggtgcagctctacgagctc
aagacctaccacgaagtggtggacgagatctatttcaaggttacgcatgttgaaccatgg
gagaagggcagcagaaaaacagcaggccagacagggatgtgtggaggggtgcgtggcgtt
ggaactggaggaattgtgtctactgctttttgtctgctctacaaattatttacactgaag
ctcactcgtaagcaagtgatgggccttatcactcatactgactccccatatattagggct
cttggatttatgtatattaggtacacacagccacctacagatctatgggactggtttgaa
tcctttcttgatgatgaggaggacctggacgtgaaggcaggtgggggttgcgttatgacc
ataggggagatgcttcgttccttcctcactaagcttgaatggttttccacattgtttcca
agaattcctgtgccagtccagaaagccattgaccagcaaattaaaagcagacctagaaaa
atcaagaaagatggcaaggaggggatggaagaaatagaccggcatgcagaacgtagacgt
tcaaggtctccaagaccaagatccatcagtcccaggaggtctcccagaagatccagaagc
agaagtcaccatcgggaaggccatggatcatctagttttgatagagaactagaaagagaa
agagaacggcagagattagaacgcgaagcaaaggagagagaaaaggaacggcggagatct
cgaagcactgatcgctcactagaacggaggcgaagcagaagcagggacagatacagaagc
cggagtcgaagtcgtgacaggaaaggagatagaagagacagggatagggagagagagaaa
gaaaatgaacggagtcggaaaaaagagagagatcatgataaggaaagaggtagtgagagg
gaaaaagatcgatctagagaaaggtcaaaagaaaggaaaagtaagggtgacacagaggag
agaagacacaaggatgacaaagatgagaagaaacaccgtgacgacaagagggattccaaa
aaagagagaaagcatagtagaagtcgaagccgggaaagaaagcataggagtaggagccga
agcaggaacacaggtaagcgcagcagaagcaggagcaaagaaaaatcaagtaaacataaa
aatgaaaataaggagaagtcaaataaacgaagtagaagcaggagcagaggaagaacagat
agtgttgagaagtccagaaaacgagatcagagtcccagcaaagaaaaacccaggaagcgt
agcagaagcaaagaacgttcccacaaacatgatcacagtgatagcaaggaccattctgac
aaacatgatcgtcgaaggagccaaagtacagaacgagagagccaagaaaagcaacagaaa
aacaaagatgagactgtgtga
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